Click here to switch to the map view.

The map label for this gene is slyA [C]

Identifier: 238026702

GI number: 238026702

Start: 1160148

End: 1160612

Strand: Direct

Name: slyA [C]

Synonym: bglu_1g10590

Alternate gene names: 238026702

Gene position: 1160148-1160612 (Clockwise)

Preceding gene: 238026697

Following gene: 238026711

Centisome position: 29.7

GC content: 67.53

Gene sequence:

>465_bases
GTGCCCACCCATGAGCCTGATCTCTGGTTCTCGTTTGTCCGGACCCATCGGCGGCTGATTCGTGAGATCGAGCGCCGCCT
GGCCGAAGCGAAGCTGCCCGCCTATGCCTGGTACGACGTTCTCTGGGGCATCGAGAGCAGCCCCGAAGGCTCGCGTCGCA
TGCATGAACTGGCCGATTCGCTGGCCGTCGAACGCTACAACCTGACCCGCCTCGTCGATCGCCTCGAGGCAGAGGGGCTC
GTCACCCGCACGCGCTCGGCCGACGACGGCCGCGCGGCCTTCGTGGCGATCACGAAGGAGGGACGCGTGCTGCGCAAGAA
GATGTGGAAGATCTACGAGGCGACCGTCGCCGAGCTGTTCGTGTCGCAATTCGATGCCGAGCAGCGCCGGCAGTTCGCGA
GCGCGCTCGACCGCGCCGCGCATGCGGCACGCGAGGCCTATTCCTCGAAGGGCGCCGCCGCCTGA

Upstream 100 bases:

>100_bases
GGGGTCGTCTCGTCCAGATATGAGTTGCAATTGCAACGAGAGCGATTGTATCGGCATAGAGTAGAATTGCAACTACAATC
GAATTGCGAGGAGTCCCGCC

Downstream 100 bases:

>100_bases
GGCGGCGGGGGCGGCAGGCGATCGGCGCCGTCAGCCGCCGATCGCCTGCCGGATGTGGCCCGACAGTTCGGCCACATGCT
GCGAGGCGCCGATGATGAAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcription Regulation Protein; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPTHEPDLWFSFVRTHRRLIREIERRLAEAKLPAYAWYDVLWGIESSPEGSRRMHELADSLAVERYNLTRLVDRLEAEGL
VTRTRSADDGRAAFVAITKEGRVLRKKMWKIYEATVAELFVSQFDAEQRRQFASALDRAAHAAREAYSSKGAAA

Sequences:

>Translated_154_residues
MPTHEPDLWFSFVRTHRRLIREIERRLAEAKLPAYAWYDVLWGIESSPEGSRRMHELADSLAVERYNLTRLVDRLEAEGL
VTRTRSADDGRAAFVAITKEGRVLRKKMWKIYEATVAELFVSQFDAEQRRQFASALDRAAHAAREAYSSKGAAA
>Mature_153_residues
PTHEPDLWFSFVRTHRRLIREIERRLAEAKLPAYAWYDVLWGIESSPEGSRRMHELADSLAVERYNLTRLVDRLEAEGLV
TRTRSADDGRAAFVAITKEGRVLRKKMWKIYEATVAELFVSQFDAEQRRQFASALDRAAHAAREAYSSKGAAA

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17710; Mature: 17579

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTHEPDLWFSFVRTHRRLIREIERRLAEAKLPAYAWYDVLWGIESSPEGSRRMHELADS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
LAVERYNLTRLVDRLEAEGLVTRTRSADDGRAAFVAITKEGRVLRKKMWKIYEATVAELF
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
VSQFDAEQRRQFASALDRAAHAAREAYSSKGAAA
HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PTHEPDLWFSFVRTHRRLIREIERRLAEAKLPAYAWYDVLWGIESSPEGSRRMHELADS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
LAVERYNLTRLVDRLEAEGLVTRTRSADDGRAAFVAITKEGRVLRKKMWKIYEATVAELF
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
VSQFDAEQRRQFASALDRAAHAAREAYSSKGAAA
HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA