| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026648
Identifier: 238026648
GI number: 238026648
Start: 1079042
End: 1080322
Strand: Direct
Name: 238026648
Synonym: bglu_1g10000
Alternate gene names: NA
Gene position: 1079042-1080322 (Clockwise)
Preceding gene: 238026643
Following gene: 238026649
Centisome position: 27.62
GC content: 71.66
Gene sequence:
>1281_bases ATGAGCGCCGTCGCGCGGATCCTCGATTGCATGCTGTTGGCGCTGAGCTGCGCGGCCTGCGTCTACGCGTGGTTCGCGGC GCTCGCGCCGGCACCGCGCGCACCGCGCGCGCACTGGCGTGACGGCCGCGCCGGCGTGAGCGTGCTCAAGCCGCTGTGCG GCGCCGAGCCGCGGCTCTATCAAAACCTCGCGAGCTTCTGCCGGCAGCGGCATCCGTGCTATCAGGTGATCTGCGGGGTG GCTTCGCCGGCCGATCCGGCGATCGCCGTGGTTCGGCGCCTGCAGGCCGATTTCCGCGATTGCGACCTCGAGCTCGTGAT CGATCCGCGCATCCACGGCCGCAATCGCAAGGTCAGCAACCTCATCAACATCGGCCGGCGAGCCCGCTACGGCCGCCTCG TGATCGCCGACAGCGACATCGCGGTCGAGCCCGACTATCTGGAGCGCGTGACGGCGCCGCTCGCCGATCCGTCGATCGGC GTGGTCACCTGCCTGTACCATGCGCGCAGCGTGGGCGGCTTCTGGGCGCGCCTCGGCGCGCAGTTCGTGGACGCATGGTT CGTGCCGTCGGTGCGGATCGCGCATCTGGGCGGTTCGAGCGATTTCGGCTTCGGCGCGACGCTCGCGCTCACGCGCGAGA CGCTGGAGCGGATCGGCGGGCTGGCCGCGCTGAAGGACGAACTGGCCGACGACTACTGGCTGGCCGCCCTGCCGCGCCGC ATGGGGCGCCGCACCGTGCTGTCCGAGGTCGACGTGACGACCGACGTGATCGAAACCCGCTTCAGCGAACTCTGGGCGCG CGAGACGCGCTGGCTTCGCACCATCCGTTCGCTGAAAATGGGTGGCTTCATTAGCCTGCTGATTACCTTCACGGTGCCCT GGCTGGCGGTGGGCGCGTCTCTGTCGGTCTGGCTCGCCGGCACCGTGCCGGGTGCGATCGGCGCGTTCGCGTCGGCGGCC GGCATGCTCGCGCGGCTGCGGCTGCATGCGCGCGTCGCGCGGGGCCGGCGCGCGTTCTGGCGCGACCTGCCGCTCGTGCC GATTCGCGATACGCTGCTGCTTGCGGCCTGGATCGCGGCCGCGTTCGGCTCGCACGTGATCTGGCGCGGCGCGCGCATCC GGGTGGCGGCACCGGCGCCGGTGGCGCGGGCCGGCACGGCCGGGCGGGCGGCGGGCGCGGCGGCAGGAACCTCGAGTGCG CGGGACCGGCAGGCGCCGCGCGGTGACGACGAACATCGACTGCACGAAGACGAATCATGCAAGATAACGGAACCCCTCTG A
Upstream 100 bases:
>100_bases CGCCGCGCGCGGGGCCAGGAGCCGGGACCGTGTCTGTCGACGTCCAATCCGCATCGCGCAGCGCGCATCGTGCCGGCCCC CGGGCCGGCCGGGGCGCCGC
Downstream 100 bases:
>100_bases AAACCCTGTTCCTGCAAGCGCCGTCCTACGACGGCTTCGACGGCGGCGCCGGCTCGCGCTACCAGGCCCGGCGCGAGATC CGCTCGTTCTGGTATCCCAC
Product: group 2 family glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Putatiave Glycosyltransferase
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSAVARILDCMLLALSCAACVYAWFAALAPAPRAPRAHWRDGRAGVSVLKPLCGAEPRLYQNLASFCRQRHPCYQVICGV ASPADPAIAVVRRLQADFRDCDLELVIDPRIHGRNRKVSNLINIGRRARYGRLVIADSDIAVEPDYLERVTAPLADPSIG VVTCLYHARSVGGFWARLGAQFVDAWFVPSVRIAHLGGSSDFGFGATLALTRETLERIGGLAALKDELADDYWLAALPRR MGRRTVLSEVDVTTDVIETRFSELWARETRWLRTIRSLKMGGFISLLITFTVPWLAVGASLSVWLAGTVPGAIGAFASAA GMLARLRLHARVARGRRAFWRDLPLVPIRDTLLLAAWIAAAFGSHVIWRGARIRVAAPAPVARAGTAGRAAGAAAGTSSA RDRQAPRGDDEHRLHEDESCKITEPL
Sequences:
>Translated_426_residues MSAVARILDCMLLALSCAACVYAWFAALAPAPRAPRAHWRDGRAGVSVLKPLCGAEPRLYQNLASFCRQRHPCYQVICGV ASPADPAIAVVRRLQADFRDCDLELVIDPRIHGRNRKVSNLINIGRRARYGRLVIADSDIAVEPDYLERVTAPLADPSIG VVTCLYHARSVGGFWARLGAQFVDAWFVPSVRIAHLGGSSDFGFGATLALTRETLERIGGLAALKDELADDYWLAALPRR MGRRTVLSEVDVTTDVIETRFSELWARETRWLRTIRSLKMGGFISLLITFTVPWLAVGASLSVWLAGTVPGAIGAFASAA GMLARLRLHARVARGRRAFWRDLPLVPIRDTLLLAAWIAAAFGSHVIWRGARIRVAAPAPVARAGTAGRAAGAAAGTSSA RDRQAPRGDDEHRLHEDESCKITEPL >Mature_425_residues SAVARILDCMLLALSCAACVYAWFAALAPAPRAPRAHWRDGRAGVSVLKPLCGAEPRLYQNLASFCRQRHPCYQVICGVA SPADPAIAVVRRLQADFRDCDLELVIDPRIHGRNRKVSNLINIGRRARYGRLVIADSDIAVEPDYLERVTAPLADPSIGV VTCLYHARSVGGFWARLGAQFVDAWFVPSVRIAHLGGSSDFGFGATLALTRETLERIGGLAALKDELADDYWLAALPRRM GRRTVLSEVDVTTDVIETRFSELWARETRWLRTIRSLKMGGFISLLITFTVPWLAVGASLSVWLAGTVPGAIGAFASAAG MLARLRLHARVARGRRAFWRDLPLVPIRDTLLLAAWIAAAFGSHVIWRGARIRVAAPAPVARAGTAGRAAGAAAGTSSAR DRQAPRGDDEHRLHEDESCKITEPL
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=229, Percent_Identity=29.2576419213974, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI32566973, Length=275, Percent_Identity=24.7272727272727, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25149574, Length=233, Percent_Identity=26.1802575107296, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI25149577, Length=233, Percent_Identity=26.1802575107296, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI32564728, Length=233, Percent_Identity=26.1802575107296, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI25149580, Length=233, Percent_Identity=26.1802575107296, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI25147526, Length=267, Percent_Identity=24.7191011235955, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24657569, Length=232, Percent_Identity=26.7241379310345, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46365; Mature: 46234
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVARILDCMLLALSCAACVYAWFAALAPAPRAPRAHWRDGRAGVSVLKPLCGAEPRLY CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHH QNLASFCRQRHPCYQVICGVASPADPAIAVVRRLQADFRDCDLELVIDPRIHGRNRKVSN HHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHH LINIGRRARYGRLVIADSDIAVEPDYLERVTAPLADPSIGVVTCLYHARSVGGFWARLGA HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH QFVDAWFVPSVRIAHLGGSSDFGFGATLALTRETLERIGGLAALKDELADDYWLAALPRR HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH MGRRTVLSEVDVTTDVIETRFSELWARETRWLRTIRSLKMGGFISLLITFTVPWLAVGAS HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LSVWLAGTVPGAIGAFASAAGMLARLRLHARVARGRRAFWRDLPLVPIRDTLLLAAWIAA CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AFGSHVIWRGARIRVAAPAPVARAGTAGRAAGAAAGTSSARDRQAPRGDDEHRLHEDESC HHCCHHEECCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCC KITEPL CCCCCC >Mature Secondary Structure SAVARILDCMLLALSCAACVYAWFAALAPAPRAPRAHWRDGRAGVSVLKPLCGAEPRLY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHH QNLASFCRQRHPCYQVICGVASPADPAIAVVRRLQADFRDCDLELVIDPRIHGRNRKVSN HHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHH LINIGRRARYGRLVIADSDIAVEPDYLERVTAPLADPSIGVVTCLYHARSVGGFWARLGA HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH QFVDAWFVPSVRIAHLGGSSDFGFGATLALTRETLERIGGLAALKDELADDYWLAALPRR HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH MGRRTVLSEVDVTTDVIETRFSELWARETRWLRTIRSLKMGGFISLLITFTVPWLAVGAS HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LSVWLAGTVPGAIGAFASAAGMLARLRLHARVARGRRAFWRDLPLVPIRDTLLLAAWIAA CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AFGSHVIWRGARIRVAAPAPVARAGTAGRAAGAAAGTSSARDRQAPRGDDEHRLHEDESC HHCCHHEECCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCC KITEPL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA