| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238026641
Identifier: 238026641
GI number: 238026641
Start: 1068280
End: 1068747
Strand: Direct
Name: 238026641
Synonym: bglu_1g09930
Alternate gene names: NA
Gene position: 1068280-1068747 (Clockwise)
Preceding gene: 238026640
Following gene: 238026642
Centisome position: 27.35
GC content: 68.8
Gene sequence:
>468_bases ATGATCATTCAGTGGCTGCTGGCCGCGATCCACCTGAGCGCTTTCGGTCTCGCGCTGGCCGCGAGCGCCACGCGCAATCG CGCGTTCAAGCGCGTCGCCGCCGCGCCCGTGGTGCAGGTCGCCGACCTGAAGGCCGTGTTCCGTGCCGACACCGGCTGGG GGCTGACGGCGCTGGTGCTGCTCGTCACCGGATTGATGCGCGCGTTCGGCGGCTTCGAGAAGGGCAGCGCCTATTATCTG CACGAGCCGCTGTTCCATCTGAAGATGACGGCCTTCGTGATCATCCTGATCCTCGAGATCCGGCCAATGAGCGCGCTGCT GCGGTGGCGAGCGGCCGTGCGGCGCGGCGAGCTGCCCGATGTGGCGCGCGCGTTCACCTATTCGCGCATCTGCCATGCGC AGGCCGCGCTGATCATCCTCATCGTGTTCGCCGCCGCCGGCATGGCGCGCGGCATCGGCGCCGGCTGA
Upstream 100 bases:
>100_bases ATCGCCTCGCGGAGCGGCGGTCGGGCCGCCTGCCTCAAAGTCCTGCGGGCCGCGCCGCGTGGGTGCGGCATGGCCGTCCC GCCCGAAACAGGAGCTTGCG
Downstream 100 bases:
>100_bases ACCTGCTGCCGCACTGCCGGCGCGAGCCGTCGGCAGCGGCCCGACAGGCCGATCTGTCCAGGCGCGTCAAGAAGTGCGAT GATTCGACATCCGACCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIIQWLLAAIHLSAFGLALAASATRNRAFKRVAAAPVVQVADLKAVFRADTGWGLTALVLLVTGLMRAFGGFEKGSAYYL HEPLFHLKMTAFVIILILEIRPMSALLRWRAAVRRGELPDVARAFTYSRICHAQAALIILIVFAAAGMARGIGAG
Sequences:
>Translated_155_residues MIIQWLLAAIHLSAFGLALAASATRNRAFKRVAAAPVVQVADLKAVFRADTGWGLTALVLLVTGLMRAFGGFEKGSAYYL HEPLFHLKMTAFVIILILEIRPMSALLRWRAAVRRGELPDVARAFTYSRICHAQAALIILIVFAAAGMARGIGAG >Mature_155_residues MIIQWLLAAIHLSAFGLALAASATRNRAFKRVAAAPVVQVADLKAVFRADTGWGLTALVLLVTGLMRAFGGFEKGSAYYL HEPLFHLKMTAFVIILILEIRPMSALLRWRAAVRRGELPDVARAFTYSRICHAQAALIILIVFAAAGMARGIGAG
Specific function: Unknown
COG id: COG3556
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16745; Mature: 16745
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIQWLLAAIHLSAFGLALAASATRNRAFKRVAAAPVVQVADLKAVFRADTGWGLTALVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LVTGLMRAFGGFEKGSAYYLHEPLFHLKMTAFVIILILEIRPMSALLRWRAAVRRGELPD HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH VARAFTYSRICHAQAALIILIVFAAAGMARGIGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIIQWLLAAIHLSAFGLALAASATRNRAFKRVAAAPVVQVADLKAVFRADTGWGLTALVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LVTGLMRAFGGFEKGSAYYLHEPLFHLKMTAFVIILILEIRPMSALLRWRAAVRRGELPD HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH VARAFTYSRICHAQAALIILIVFAAAGMARGIGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA