Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is pqqB [H]
Identifier: 238025537
GI number: 238025537
Start: 2769170
End: 2770081
Strand: Reverse
Name: pqqB [H]
Synonym: bglu_2g22330
Alternate gene names: 238025537
Gene position: 2770081-2769170 (Counterclockwise)
Preceding gene: 238025538
Following gene: 238025536
Centisome position: 97.98
GC content: 71.6
Gene sequence:
>912_bases ATGCACATCCAGATCCTGGGCTCCGCGGCGGGCGGCGGCTTTCCGCAGTGGAACTGCAACTGCGCGAACTGCGCGGGCTT TCGCGCCGGCGCCATCGAGGCGCGCGCGCGCACCCAGTCGTCGCTGGCGATTTCCGACGACGGCGTCTCGTGGGTGCTCT GCAACGCCTCGCCCGACATCCGCGCGCAGCTCCAGCAGTTCGCGCCGCTGCAGCCGGGCCGCGCGCTGCGCGACACCGGC ATCGCCGCGATCGTGCTGATGGACAGCCAGATCGACCACACCACGGGGCTGCTCAGCCTGCGCGAGGGCTGCCCGCTCGA CGTCTGGTGTACCGACATGGTCCACGAGGATCTCAGCACCGGCTTCCCGCTCTTCACGATGCTCGGCCACTGGAACGGCG GCCTGCGCTGGAACCCGATCACGCCCGGGCGCGACTTCACGATCGCCGCGTGCCCGGCGCTGCGCTTCACGCCGTTCGTG CTGCAAAGCGCGGCGCCTCCCTACTCGCCGCACCGGCACGATCCGCATCCGGGCGACAACATCGGCCTGGTGGTGGAGGA CCGGCGCAGCGGCGGCAAGCTGTTCTACGCGCCGGGGCTCGGCGCCGTGGACGACGCGCTCGCCGCGCGCATGGCGGTGG CCGACTGCCTGCTGGTGGACGGCACCCTCTGGCACGACGACGAGATGCGCCGGCGCGGCGTGGGCACGCGCACCGGCCGC GAGATGGGCCACCTCGCGCAAAGCGGCCCCGGCGGCATGCTGGAGGTGCTCGAACGCTTCCCGGCGCAGCGCAAGATCCT CACCCACATCAACAACACGAACCCGATCCTCGACGAACGCTCGCCGGAACGCGCCGAGCTCGCGCGCCGGCAGGTGGAGG TCGCGTTCGACGGCATGCGGATCGAACTCTGA
Upstream 100 bases:
>100_bases GACCAGCCTCGGTTCGCCGGGGCTGTTTTTCTTGTGAGCGGGCCGCGCGGCCTTCGCGGCGCTCGCTCGCGGCCCCCGGC GGCCCTTCACGACCTCAAGC
Downstream 100 bases:
>100_bases TCCGCGGGCGGCCGCTCCGCGCGCCGCCGCCACCGACTCACTGGAAACCGCACCGACATGAGCCAGACCGCCCAACCCGC CCTCGATGCCGAGCAGTTCG
Product: pyrroloquinoline quinone biosynthesis protein PqqB
Products: NA
Alternate protein names: Pyrroloquinoline quinone biosynthesis protein B [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDIRAQLQQFAPLQPGRALRDTG IAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLSTGFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFV LQSAAPPYSPHRHDPHPGDNIGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMRIEL
Sequences:
>Translated_303_residues MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDIRAQLQQFAPLQPGRALRDTG IAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLSTGFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFV LQSAAPPYSPHRHDPHPGDNIGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMRIEL >Mature_303_residues MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDIRAQLQQFAPLQPGRALRDTG IAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLSTGFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFV LQSAAPPYSPHRHDPHPGDNIGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMRIEL
Specific function: May be involved in the transport of PQQ or its precursor to the periplasm [H]
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011842 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32963; Mature: 32963
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDI CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCEEEEECCCCHH RAQLQQFAPLQPGRALRDTGIAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLST HHHHHHHCCCCCCCHHHHCCEEEEEEECCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHC GFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFVLQSAAPPYSPHRHDPHPGDN CCCHHHHHHCCCCCCEECCCCCCCCEEEEECCCHHCCHHHHHCCCCCCCCCCCCCCCCCC IGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR EEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCEEECCHHHHHCCCCCCCCH EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMR HHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEECCEE IEL EEC >Mature Secondary Structure MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDI CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCEEEEECCCCHH RAQLQQFAPLQPGRALRDTGIAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLST HHHHHHHCCCCCCCHHHHCCEEEEEEECCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHC GFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFVLQSAAPPYSPHRHDPHPGDN CCCHHHHHHCCCCCCEECCCCCCCCEEEEECCCHHCCHHHHHCCCCCCCCCCCCCCCCCC IGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR EEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCEEECCHHHHHCCCCCCCCH EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMR HHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEECCEE IEL EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA