Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is pqqC [H]

Identifier: 238025536

GI number: 238025536

Start: 2768354

End: 2769112

Strand: Reverse

Name: pqqC [H]

Synonym: bglu_2g22320

Alternate gene names: 238025536

Gene position: 2769112-2768354 (Counterclockwise)

Preceding gene: 238025537

Following gene: 238025535

Centisome position: 97.94

GC content: 67.06

Gene sequence:

>759_bases
ATGAGCCAGACCGCCCAACCCGCCCTCGATGCCGAGCAGTTCGAGCAGGCGCTGCGCGCCAAGGGCGCCTTCTATCACAT
CCATCATCCGTACCACGTCGCGATGTACGAAGGGCGCGCGACGCGCGAGCAGATCCAGGGCTGGGTCGCGAACCGCTTCT
ACTATCAGGTCAACATCCCGCTGAAGGACGCGGCGATCCTCGCCAACTGCCCCGATCGCGAGGTGCGCCGCGAATGGATC
CAGCGCCTGATCGATCACGACGGCGCACCCGGCCAGGACGGCGGCATCGAGGCCTGGCTGCGGCTCGGCGAGGCCGTGGG
GCTCGATCCCGAGCAGCTGCGCTCGCAGGAACTGGTGCTGCCGGGCGTGCGTTTTGCTGTCGACGCCTACGTGAACTTCG
CGCGCCGCGCGAGCTGGCAGGAGGCGGCCAGCAGTTCGCTGACCGAGCTGTTCGCGCCGCAGATCCACCAGTCGCGGCTC
GACACCTGGCCGCGGCATTACCCGTGGATCGATCCGCGCGGCTACGAGTACTTCCGCTCGCGGCTCGGCCAGGCGCGCCG
CGACGTCGAACACGGCCTGCGCATCACGCTCGCGCACTACACCACCTTCGAGGCCCAGCAGCGTATGCTGGAGATCCTGC
AGTTCAAGCTCGACATTCTCTGGAGCATGCTCGACGCGATGTCGATGGCCTACGAACTGCATCGTCCTCCGTATCACACC
GTGACCACCGGGCGGGTCTGGCACAAGGGAATCGCGTGA

Upstream 100 bases:

>100_bases
GCAGGTGGAGGTCGCGTTCGACGGCATGCGGATCGAACTCTGATCCGCGGGCGGCCGCTCCGCGCGCCGCCGCCACCGAC
TCACTGGAAACCGCACCGAC

Downstream 100 bases:

>100_bases
TGAGCTTCGATCGACAACAGACGCCGAAGTGGCGCCGCGGCTACCGCTTCCAGTTCGAACCGGCGCAGGACGCGCACGTG
CTGCTCTATCCCGAGGGCAT

Product: pyrroloquinoline quinone biosynthesis protein PqqC

Products: NA

Alternate protein names: Coenzyme PQQ synthesis protein C; Pyrroloquinoline quinone biosynthesis protein C [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIPLKDAAILANCPDREVRREWI
QRLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVLPGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRL
DTWPRHYPWIDPRGYEYFRSRLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHT
VTTGRVWHKGIA

Sequences:

>Translated_252_residues
MSQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIPLKDAAILANCPDREVRREWI
QRLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVLPGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRL
DTWPRHYPWIDPRGYEYFRSRLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHT
VTTGRVWHKGIA
>Mature_251_residues
SQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIPLKDAAILANCPDREVRREWIQ
RLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVLPGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLD
TWPRHYPWIDPRGYEYFRSRLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHTV
TTGRVWHKGIA

Specific function: Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ [H]

COG id: COG5424

COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR011845
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: =1.3.3.11 [H]

Molecular weight: Translated: 29296; Mature: 29164

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIP
CCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECCCHHHHHHHHHHHHEEEEEEECC
LKDAAILANCPDREVRREWIQRLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVL
HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCC
PGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLDTWPRHYPWIDPRGYEYFRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
RLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHT
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VTTGRVWHKGIA
ECCCHHHHCCCC
>Mature Secondary Structure 
SQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIP
CCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECCCHHHHHHHHHHHHEEEEEEECC
LKDAAILANCPDREVRREWIQRLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVL
HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCC
PGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLDTWPRHYPWIDPRGYEYFRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
RLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHT
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VTTGRVWHKGIA
ECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA