Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is pqqC [H]
Identifier: 238025536
GI number: 238025536
Start: 2768354
End: 2769112
Strand: Reverse
Name: pqqC [H]
Synonym: bglu_2g22320
Alternate gene names: 238025536
Gene position: 2769112-2768354 (Counterclockwise)
Preceding gene: 238025537
Following gene: 238025535
Centisome position: 97.94
GC content: 67.06
Gene sequence:
>759_bases ATGAGCCAGACCGCCCAACCCGCCCTCGATGCCGAGCAGTTCGAGCAGGCGCTGCGCGCCAAGGGCGCCTTCTATCACAT CCATCATCCGTACCACGTCGCGATGTACGAAGGGCGCGCGACGCGCGAGCAGATCCAGGGCTGGGTCGCGAACCGCTTCT ACTATCAGGTCAACATCCCGCTGAAGGACGCGGCGATCCTCGCCAACTGCCCCGATCGCGAGGTGCGCCGCGAATGGATC CAGCGCCTGATCGATCACGACGGCGCACCCGGCCAGGACGGCGGCATCGAGGCCTGGCTGCGGCTCGGCGAGGCCGTGGG GCTCGATCCCGAGCAGCTGCGCTCGCAGGAACTGGTGCTGCCGGGCGTGCGTTTTGCTGTCGACGCCTACGTGAACTTCG CGCGCCGCGCGAGCTGGCAGGAGGCGGCCAGCAGTTCGCTGACCGAGCTGTTCGCGCCGCAGATCCACCAGTCGCGGCTC GACACCTGGCCGCGGCATTACCCGTGGATCGATCCGCGCGGCTACGAGTACTTCCGCTCGCGGCTCGGCCAGGCGCGCCG CGACGTCGAACACGGCCTGCGCATCACGCTCGCGCACTACACCACCTTCGAGGCCCAGCAGCGTATGCTGGAGATCCTGC AGTTCAAGCTCGACATTCTCTGGAGCATGCTCGACGCGATGTCGATGGCCTACGAACTGCATCGTCCTCCGTATCACACC GTGACCACCGGGCGGGTCTGGCACAAGGGAATCGCGTGA
Upstream 100 bases:
>100_bases GCAGGTGGAGGTCGCGTTCGACGGCATGCGGATCGAACTCTGATCCGCGGGCGGCCGCTCCGCGCGCCGCCGCCACCGAC TCACTGGAAACCGCACCGAC
Downstream 100 bases:
>100_bases TGAGCTTCGATCGACAACAGACGCCGAAGTGGCGCCGCGGCTACCGCTTCCAGTTCGAACCGGCGCAGGACGCGCACGTG CTGCTCTATCCCGAGGGCAT
Product: pyrroloquinoline quinone biosynthesis protein PqqC
Products: NA
Alternate protein names: Coenzyme PQQ synthesis protein C; Pyrroloquinoline quinone biosynthesis protein C [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIPLKDAAILANCPDREVRREWI QRLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVLPGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRL DTWPRHYPWIDPRGYEYFRSRLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHT VTTGRVWHKGIA
Sequences:
>Translated_252_residues MSQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIPLKDAAILANCPDREVRREWI QRLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVLPGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRL DTWPRHYPWIDPRGYEYFRSRLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHT VTTGRVWHKGIA >Mature_251_residues SQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIPLKDAAILANCPDREVRREWIQ RLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVLPGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLD TWPRHYPWIDPRGYEYFRSRLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHTV TTGRVWHKGIA
Specific function: Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ [H]
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR011845 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: =1.3.3.11 [H]
Molecular weight: Translated: 29296; Mature: 29164
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIP CCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECCCHHHHHHHHHHHHEEEEEEECC LKDAAILANCPDREVRREWIQRLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVL HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCC PGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLDTWPRHYPWIDPRGYEYFRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH RLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHT HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VTTGRVWHKGIA ECCCHHHHCCCC >Mature Secondary Structure SQTAQPALDAEQFEQALRAKGAFYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIP CCCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEEECCCHHHHHHHHHHHHEEEEEEECC LKDAAILANCPDREVRREWIQRLIDHDGAPGQDGGIEAWLRLGEAVGLDPEQLRSQELVL HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCC PGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLDTWPRHYPWIDPRGYEYFRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH RLGQARRDVEHGLRITLAHYTTFEAQQRMLEILQFKLDILWSMLDAMSMAYELHRPPYHT HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VTTGRVWHKGIA ECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA