Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025507
Identifier: 238025507
GI number: 238025507
Start: 2734553
End: 2734840
Strand: Reverse
Name: 238025507
Synonym: bglu_2g22030
Alternate gene names: NA
Gene position: 2734840-2734553 (Counterclockwise)
Preceding gene: 238025511
Following gene: 238025506
Centisome position: 96.73
GC content: 65.62
Gene sequence:
>288_bases ATGAAACATCGATTGGCGAAGCTGCCCTCGCCACGCAAGCCCGCCGTGCAACTGGCATTGTCGATCGCTTTGCTCGCGAG TCTCGCGGGATGCGGCGGCGGCGCCCCGCTGTTTACGCCCGACGGCCGCGCGACCGTGCAAGTCCAATGCCCCGAAGCCG GCCCGTGGGACACTTGTCTGCAAAATGCCCGCGGCATTTGCGACGGCAATTTCGACACGATTCGCCAATCGGTCGACGAC GGCACCCGCACCCTGCTCTTCGCCTGCCGTGTCGGTGCGGCCCATTAG
Upstream 100 bases:
>100_bases CGCGCGAATGATAGCGTTCGGACCGCATTGAATTGACTTTGGACCGTTGCGGCATGGCATACTCGCGTCGTCCCAAAAGT AGATTGACTGGAAACCGCCC
Downstream 100 bases:
>100_bases CGGTGGCATTGACGGCCCGGCGTGCGATGCGAAAAAACACGTACTCCGGGTAAATTGATTTCTATACTGTCCAAATAACC AATCACGGAGCCGAATTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MKHRLAKLPSPRKPAVQLALSIALLASLAGCGGGAPLFTPDGRATVQVQCPEAGPWDTCLQNARGICDGNFDTIRQSVDD GTRTLLFACRVGAAH
Sequences:
>Translated_95_residues MKHRLAKLPSPRKPAVQLALSIALLASLAGCGGGAPLFTPDGRATVQVQCPEAGPWDTCLQNARGICDGNFDTIRQSVDD GTRTLLFACRVGAAH >Mature_95_residues MKHRLAKLPSPRKPAVQLALSIALLASLAGCGGGAPLFTPDGRATVQVQCPEAGPWDTCLQNARGICDGNFDTIRQSVDD GTRTLLFACRVGAAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9943; Mature: 9943
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHRLAKLPSPRKPAVQLALSIALLASLAGCGGGAPLFTPDGRATVQVQCPEAGPWDTCL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH QNARGICDGNFDTIRQSVDDGTRTLLFACRVGAAH HHCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKHRLAKLPSPRKPAVQLALSIALLASLAGCGGGAPLFTPDGRATVQVQCPEAGPWDTCL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH QNARGICDGNFDTIRQSVDDGTRTLLFACRVGAAH HHCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA