Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025506
Identifier: 238025506
GI number: 238025506
Start: 2734161
End: 2734451
Strand: Reverse
Name: 238025506
Synonym: bglu_2g22020
Alternate gene names: NA
Gene position: 2734451-2734161 (Counterclockwise)
Preceding gene: 238025507
Following gene: 238025505
Centisome position: 96.71
GC content: 60.48
Gene sequence:
>291_bases ATGGCGACCTACCGGCAACTGACCGTCCAGCTCGAAAAGCTGCAACAGAAAATCGACAAGGAGCGCGAAAAGGCCATCTC GGACGCGATCGCCGATATCAAGGCGAAAATCGCGGAATACGACATCACGCCTGAAGAACTCGGGTTCCGGAGCGCCGCTG CCGCAACGAAGCCCAAAAAGCCGTTGCCGCCGAAATACCTGAATCCGAAGACCGGCGAGACCTGGAGCGGCCGAGGCCGC GCGCCGGCTTGGCTCGGCAAGAACCGGAACCGCTTCCTGATCAAGGACTGA
Upstream 100 bases:
>100_bases GGTGGCATTGACGGCCCGGCGTGCGATGCGAAAAAACACGTACTCCGGGTAAATTGATTTCTATACTGTCCAAATAACCA ATCACGGAGCCGAATTCGAT
Downstream 100 bases:
>100_bases TCCCGGAAAGTCTCACCTTTGGCGCCTGCTGAAACGGTGCGGATCGACTTCAGGTCGTTCGCGCCGTTTTGTTTTGCCGT TTTACGGCCGGCCGCTTTTC
Product: H-NS histone family protein
Products: NA
Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS-Like Proteins; H-NS-Like Transcription Regulator; H-NS Histone Family Protein
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MATYRQLTVQLEKLQQKIDKEREKAISDAIADIKAKIAEYDITPEELGFRSAAAATKPKKPLPPKYLNPKTGETWSGRGR APAWLGKNRNRFLIKD
Sequences:
>Translated_96_residues MATYRQLTVQLEKLQQKIDKEREKAISDAIADIKAKIAEYDITPEELGFRSAAAATKPKKPLPPKYLNPKTGETWSGRGR APAWLGKNRNRFLIKD >Mature_95_residues ATYRQLTVQLEKLQQKIDKEREKAISDAIADIKAKIAEYDITPEELGFRSAAAATKPKKPLPPKYLNPKTGETWSGRGRA PAWLGKNRNRFLIKD
Specific function: Unknown
COG id: COG2916
COG function: function code R; DNA-binding protein H-NS
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10882; Mature: 10750
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYRQLTVQLEKLQQKIDKEREKAISDAIADIKAKIAEYDITPEELGFRSAAAATKPKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHCCCCCCC PLPPKYLNPKTGETWSGRGRAPAWLGKNRNRFLIKD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure ATYRQLTVQLEKLQQKIDKEREKAISDAIADIKAKIAEYDITPEELGFRSAAAATKPKK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHCCCCCCC PLPPKYLNPKTGETWSGRGRAPAWLGKNRNRFLIKD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA