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The map label for this gene is czcR [H]

Identifier: 238025463

GI number: 238025463

Start: 2672254

End: 2673183

Strand: Reverse

Name: czcR [H]

Synonym: bglu_2g21550

Alternate gene names: 238025463

Gene position: 2673183-2672254 (Counterclockwise)

Preceding gene: 238025466

Following gene: 238025462

Centisome position: 94.55

GC content: 71.29

Gene sequence:

>930_bases
ATGGATCTTGCCGACCTGAAGACCTTCGAAGCCGTAGCGCGCCATGGCAGCATGAGCAAGGCGGCGGCCGAACTGCACAC
GGTGCAGTCGAACGTGACCGCGCGGATTCGTGCGCTGGAGGACGAACTCGGCATCGCGCTGTTCCAGCGTCATGCGCGCG
GCGTGACCGTCACGCCGGCCGCGCAGCGGATGCTGCCGTTCGTCGGCCGCATCGCGCAGCTCGTCAACGAGGCACGCGCC
GCCGCCGCCGATGGCGGCGAGCCTACCGGCACGCTCGCGCTCGGCACGCTGGAAACCACCATGGCGTTGCGGCTCTCGCC
GCTGCTGACCGATTTCGCGCGCCGCTGGCCGGAAGTGCGGCTCGTGGTCAATTCGGGCACCACCTCGGGGCTGATGCAGG
ACGTGATCGACTACCGGCTCGACGGAGCCTTCGTGGCCGGCCCGATTCACCATCCGGCGCTGCATGCCGAGACGATGTTC
AGCGAGGAGCTGGTGCTGGTGGCGGGCCCCGCGGTGCGCTCCGCGAAGGAGCTGGCCGGCCGGCCGGACCTGAAGACGGT
GGTGTTCCAGTTCGGCTGCTCGTACCGGCAGCGGCTCGAAGCGTTCCTGGCCGGGATGGGCATCGTGGTGGCCAAGCCGC
TCGAATTCGGCTCGCTGGACGCGATCGTCAGCTGCGTGGCGGCCGGGGTGGGCATCACGCTGCTGCCCAAGGGCGTGGTG
GCCGACGCGGTGGCGGCCGGCGACGTCTCGATCCACCGCGTGCCGAAGGCGCTGGCGCAGGTCGAGACGCTGTTCGTGCG
GCGCGAGGACGCCTACGTATCGAGCGCGATGACGGCGTTCCTGCAGATGGCGCGGCAGGCCTACCGGCAGTCGACGGCGG
CGCCGCGGCGCGGGCGCCGTGGCATCGAGCCCCGGGCGGTGCCGGCCTGA

Upstream 100 bases:

>100_bases
CAGAGATGGCGGTCGCGCCGAGCGGCCGTTGCCCGGCGCGGCGGCGGGCTCGCTACAATCGTCGCGTCGATAGCCCACGA
AGCGTTCCGCTTTTCCGATC

Downstream 100 bases:

>100_bases
GGTCTGGTGCCCGGCTGGCCGCGCCGCCCCGGCGCCGGCCGCTCCGCTGCCGTGTCATCGACCGCCCGCCCGGGCACGCG
CGATGACCCGATCCGCTGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MDLADLKTFEAVARHGSMSKAAAELHTVQSNVTARIRALEDELGIALFQRHARGVTVTPAAQRMLPFVGRIAQLVNEARA
AAADGGEPTGTLALGTLETTMALRLSPLLTDFARRWPEVRLVVNSGTTSGLMQDVIDYRLDGAFVAGPIHHPALHAETMF
SEELVLVAGPAVRSAKELAGRPDLKTVVFQFGCSYRQRLEAFLAGMGIVVAKPLEFGSLDAIVSCVAAGVGITLLPKGVV
ADAVAAGDVSIHRVPKALAQVETLFVRREDAYVSSAMTAFLQMARQAYRQSTAAPRRGRRGIEPRAVPA

Sequences:

>Translated_309_residues
MDLADLKTFEAVARHGSMSKAAAELHTVQSNVTARIRALEDELGIALFQRHARGVTVTPAAQRMLPFVGRIAQLVNEARA
AAADGGEPTGTLALGTLETTMALRLSPLLTDFARRWPEVRLVVNSGTTSGLMQDVIDYRLDGAFVAGPIHHPALHAETMF
SEELVLVAGPAVRSAKELAGRPDLKTVVFQFGCSYRQRLEAFLAGMGIVVAKPLEFGSLDAIVSCVAAGVGITLLPKGVV
ADAVAAGDVSIHRVPKALAQVETLFVRREDAYVSSAMTAFLQMARQAYRQSTAAPRRGRRGIEPRAVPA
>Mature_309_residues
MDLADLKTFEAVARHGSMSKAAAELHTVQSNVTARIRALEDELGIALFQRHARGVTVTPAAQRMLPFVGRIAQLVNEARA
AAADGGEPTGTLALGTLETTMALRLSPLLTDFARRWPEVRLVVNSGTTSGLMQDVIDYRLDGAFVAGPIHHPALHAETMF
SEELVLVAGPAVRSAKELAGRPDLKTVVFQFGCSYRQRLEAFLAGMGIVVAKPLEFGSLDAIVSCVAAGVGITLLPKGVV
ADAVAAGDVSIHRVPKALAQVETLFVRREDAYVSSAMTAFLQMARQAYRQSTAAPRRGRRGIEPRAVPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787806, Length=299, Percent_Identity=33.7792642140468, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI87082132, Length=290, Percent_Identity=26.551724137931, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI157672245, Length=284, Percent_Identity=27.112676056338, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1788481, Length=287, Percent_Identity=25.4355400696864, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790208, Length=253, Percent_Identity=28.8537549407115, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790262, Length=248, Percent_Identity=28.2258064516129, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788706, Length=212, Percent_Identity=31.6037735849057, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788748, Length=288, Percent_Identity=24.6527777777778, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790399, Length=241, Percent_Identity=26.1410788381743, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787530, Length=297, Percent_Identity=25.2525252525253, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789173, Length=187, Percent_Identity=31.5508021390374, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI145693105, Length=291, Percent_Identity=24.0549828178694, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786401, Length=193, Percent_Identity=27.979274611399, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787589, Length=265, Percent_Identity=26.0377358490566, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789506, Length=239, Percent_Identity=25.9414225941423, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787128, Length=306, Percent_Identity=24.8366013071895, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787949, Length=257, Percent_Identity=27.6264591439689, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32961; Mature: 32961

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLADLKTFEAVARHGSMSKAAAELHTVQSNVTARIRALEDELGIALFQRHARGVTVTPA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHH
AQRMLPFVGRIAQLVNEARAAAADGGEPTGTLALGTLETTMALRLSPLLTDFARRWPEVR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEE
LVVNSGTTSGLMQDVIDYRLDGAFVAGPIHHPALHAETMFSEELVLVAGPAVRSAKELAG
EEEECCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHCC
RPDLKTVVFQFGCSYRQRLEAFLAGMGIVVAKPLEFGSLDAIVSCVAAGVGITLLPKGVV
CCCHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCEECCCHHH
ADAVAAGDVSIHRVPKALAQVETLFVRREDAYVSSAMTAFLQMARQAYRQSTAAPRRGRR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GIEPRAVPA
CCCCCCCCC
>Mature Secondary Structure
MDLADLKTFEAVARHGSMSKAAAELHTVQSNVTARIRALEDELGIALFQRHARGVTVTPA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHH
AQRMLPFVGRIAQLVNEARAAAADGGEPTGTLALGTLETTMALRLSPLLTDFARRWPEVR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEE
LVVNSGTTSGLMQDVIDYRLDGAFVAGPIHHPALHAETMFSEELVLVAGPAVRSAKELAG
EEEECCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHCC
RPDLKTVVFQFGCSYRQRLEAFLAGMGIVVAKPLEFGSLDAIVSCVAAGVGITLLPKGVV
CCCHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCEECCCHHH
ADAVAAGDVSIHRVPKALAQVETLFVRREDAYVSSAMTAFLQMARQAYRQSTAAPRRGRR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GIEPRAVPA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA