Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025462

Identifier: 238025462

GI number: 238025462

Start: 2671312

End: 2671848

Strand: Reverse

Name: 238025462

Synonym: bglu_2g21540

Alternate gene names: NA

Gene position: 2671848-2671312 (Counterclockwise)

Preceding gene: 238025463

Following gene: 238025460

Centisome position: 94.5

GC content: 69.83

Gene sequence:

>537_bases
ATGTCCCGTCTTTCCACCCTCGCCCCTGCCGACGCCACCGGTGCCGCCGCGGAGGTGTTCGCGAAGATCCGCAAGGCCGT
CGGCAAGGTGCCGAACGCCTACGCGACGATCGGCACGCATCATCCGGAGGCACTCGCCGCGATGCTCGGCGTCGATGCGC
TCGTCGCCGGCGGCACGCTCGGCAAGGCCGAGATCGAGACGATCAAGCTCGCCGTCAGCGAGGCGGCCGGCTGTGACTAC
TGCGTCGCCGCGCACACGCTGGCCGGCAAGTTCGCCGGGCTGTCGCCCGAGACGATGCAGCAGGTGCGCGCCGGCGAGCC
GACCGGCGACGCCAGGCGCGATGCGCTGGTGGCCTTCGTGCGCACGCTCGTGACGACGCGCGGCACGGTGCCCGCCGACG
CGTTCGAGCGCTTCATCGCGGCGGGTTTCACGGAGCGGCAGGTGGTGGAGGTGAGCCTCGCGATCACGTCGATCACGTTC
ACGAACCTGATCAATCGCGCGAACGATACGACGCTGGATTTCCCGGCCGTGAAGTGA

Upstream 100 bases:

>100_bases
TTCAGGCATTCATGGGCTCCCGGTGCGGGCCTACACTGGCTTCACCGTCACAGCCGTGACGAAGCCGGCGAAGCCGGCCA
ACCAATCCCAGGAGTCCATC

Downstream 100 bases:

>100_bases
GTGGCGCTGCACGAGCGGCCGGCGGGAAGCACGCGGCGGCGGCTGCCGTGCCGCGCGGCGGGCGCTCAGGCGGCACCAAC
GCCGCCTGGGCGCCCGCCGC

Product: AhpD family alkylhydroperoxidase like protein

Products: NA

Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Carboxymuconolactone Decarboxylase; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Peroxidase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase-Like Protein; Mip Protein; MIP-(Macrophage Infectivity Potentiator)-Like Protein; AhpD-Like Alkylhydroperoxidase; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Alkylhydroperoxidase-Like Protein AhpD Family; AhpD Family Alkylhydroperoxidase; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTLGKAEIETIKLAVSEAAGCDY
CVAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFVRTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITF
TNLINRANDTTLDFPAVK

Sequences:

>Translated_178_residues
MSRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTLGKAEIETIKLAVSEAAGCDY
CVAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFVRTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITF
TNLINRANDTTLDFPAVK
>Mature_177_residues
SRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTLGKAEIETIKLAVSEAAGCDYC
VAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFVRTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITFT
NLINRANDTTLDFPAVK

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18459; Mature: 18328

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCC
GKAEIETIKLAVSEAAGCDYCVAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFV
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
RTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITFTNLINRANDTTLDFPAVK
HHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCC
GKAEIETIKLAVSEAAGCDYCVAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFV
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
RTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITFTNLINRANDTTLDFPAVK
HHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA