Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025462
Identifier: 238025462
GI number: 238025462
Start: 2671312
End: 2671848
Strand: Reverse
Name: 238025462
Synonym: bglu_2g21540
Alternate gene names: NA
Gene position: 2671848-2671312 (Counterclockwise)
Preceding gene: 238025463
Following gene: 238025460
Centisome position: 94.5
GC content: 69.83
Gene sequence:
>537_bases ATGTCCCGTCTTTCCACCCTCGCCCCTGCCGACGCCACCGGTGCCGCCGCGGAGGTGTTCGCGAAGATCCGCAAGGCCGT CGGCAAGGTGCCGAACGCCTACGCGACGATCGGCACGCATCATCCGGAGGCACTCGCCGCGATGCTCGGCGTCGATGCGC TCGTCGCCGGCGGCACGCTCGGCAAGGCCGAGATCGAGACGATCAAGCTCGCCGTCAGCGAGGCGGCCGGCTGTGACTAC TGCGTCGCCGCGCACACGCTGGCCGGCAAGTTCGCCGGGCTGTCGCCCGAGACGATGCAGCAGGTGCGCGCCGGCGAGCC GACCGGCGACGCCAGGCGCGATGCGCTGGTGGCCTTCGTGCGCACGCTCGTGACGACGCGCGGCACGGTGCCCGCCGACG CGTTCGAGCGCTTCATCGCGGCGGGTTTCACGGAGCGGCAGGTGGTGGAGGTGAGCCTCGCGATCACGTCGATCACGTTC ACGAACCTGATCAATCGCGCGAACGATACGACGCTGGATTTCCCGGCCGTGAAGTGA
Upstream 100 bases:
>100_bases TTCAGGCATTCATGGGCTCCCGGTGCGGGCCTACACTGGCTTCACCGTCACAGCCGTGACGAAGCCGGCGAAGCCGGCCA ACCAATCCCAGGAGTCCATC
Downstream 100 bases:
>100_bases GTGGCGCTGCACGAGCGGCCGGCGGGAAGCACGCGGCGGCGGCTGCCGTGCCGCGCGGCGGGCGCTCAGGCGGCACCAAC GCCGCCTGGGCGCCCGCCGC
Product: AhpD family alkylhydroperoxidase like protein
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Carboxymuconolactone Decarboxylase; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Peroxidase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase-Like Protein; Mip Protein; MIP-(Macrophage Infectivity Potentiator)-Like Protein; AhpD-Like Alkylhydroperoxidase; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Alkylhydroperoxidase-Like Protein AhpD Family; AhpD Family Alkylhydroperoxidase; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTLGKAEIETIKLAVSEAAGCDY CVAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFVRTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITF TNLINRANDTTLDFPAVK
Sequences:
>Translated_178_residues MSRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTLGKAEIETIKLAVSEAAGCDY CVAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFVRTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITF TNLINRANDTTLDFPAVK >Mature_177_residues SRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTLGKAEIETIKLAVSEAAGCDYC VAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFVRTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITFT NLINRANDTTLDFPAVK
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18459; Mature: 18328
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCC GKAEIETIKLAVSEAAGCDYCVAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFV CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH RTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITFTNLINRANDTTLDFPAVK HHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SRLSTLAPADATGAAAEVFAKIRKAVGKVPNAYATIGTHHPEALAAMLGVDALVAGGTL CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCC GKAEIETIKLAVSEAAGCDYCVAAHTLAGKFAGLSPETMQQVRAGEPTGDARRDALVAFV CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH RTLVTTRGTVPADAFERFIAAGFTERQVVEVSLAITSITFTNLINRANDTTLDFPAVK HHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA