Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025456
Identifier: 238025456
GI number: 238025456
Start: 2666094
End: 2666435
Strand: Reverse
Name: 238025456
Synonym: bglu_2g21480
Alternate gene names: NA
Gene position: 2666435-2666094 (Counterclockwise)
Preceding gene: 238025460
Following gene: 238025455
Centisome position: 94.31
GC content: 72.81
Gene sequence:
>342_bases GTGAGCAAACTGAAAATCGTGCTCGGCGTCGCGGCGCTTGCCGCCGTGAGCGCCACGAGCGCCGCCCAGGCGGCGCGGGT GGGGGTGTACATCGGCCCCGGCTGGGGCGGCTACTGGTATCCGCCACCCGTCTATTACGCGCCGCCGCCGGTGGTTGCGG TGCCGCTCGATCCCGGCCCGCCGCCCGAATATGTCGAGCAGGGCGGGCCGCCGGCCGAGGCCGCCGGCGCGCCGCCGCTC GATCCCGGCTCCTGGTACTACTGCAGCGCGTCGAAGCGTTACTACCCCTACGTGAAGACCTGCCCGTCAGGCTGGCGCGA AGTGCCGGCCCGCCCGCAATGA
Upstream 100 bases:
>100_bases TCGCTGCGCAGACTCGTAACGGACGGCGTGCGGCCGCCGGGTAGCGTCTCGGGTATCGACAAGACGCGGGGCAGCGACCC CGTTTTTCCCGGAGCGTGAA
Downstream 100 bases:
>100_bases CCATGACGAGAACACCGATGAGATTCGAAATTCGCCGCGGCGGGCGCTGGGCGCTCGCCGCCGCCGCGGGTGCCGGCCTG CTCGGCGCCTGCGCGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSKLKIVLGVAALAAVSATSAAQAARVGVYIGPGWGGYWYPPPVYYAPPPVVAVPLDPGPPPEYVEQGGPPAEAAGAPPL DPGSWYYCSASKRYYPYVKTCPSGWREVPARPQ
Sequences:
>Translated_113_residues MSKLKIVLGVAALAAVSATSAAQAARVGVYIGPGWGGYWYPPPVYYAPPPVVAVPLDPGPPPEYVEQGGPPAEAAGAPPL DPGSWYYCSASKRYYPYVKTCPSGWREVPARPQ >Mature_112_residues SKLKIVLGVAALAAVSATSAAQAARVGVYIGPGWGGYWYPPPVYYAPPPVVAVPLDPGPPPEYVEQGGPPAEAAGAPPLD PGSWYYCSASKRYYPYVKTCPSGWREVPARPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11890; Mature: 11758
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLKIVLGVAALAAVSATSAAQAARVGVYIGPGWGGYWYPPPVYYAPPPVVAVPLDPGP CCCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC PPEYVEQGGPPAEAAGAPPLDPGSWYYCSASKRYYPYVKTCPSGWREVPARPQ CHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHCCCCCCC >Mature Secondary Structure SKLKIVLGVAALAAVSATSAAQAARVGVYIGPGWGGYWYPPPVYYAPPPVVAVPLDPGP CCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC PPEYVEQGGPPAEAAGAPPLDPGSWYYCSASKRYYPYVKTCPSGWREVPARPQ CHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA