Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025434
Identifier: 238025434
GI number: 238025434
Start: 2632803
End: 2633753
Strand: Reverse
Name: 238025434
Synonym: bglu_2g21240
Alternate gene names: NA
Gene position: 2633753-2632803 (Counterclockwise)
Preceding gene: 238025435
Following gene: 238025433
Centisome position: 93.15
GC content: 70.98
Gene sequence:
>951_bases ATGACGGTCTCGCTGACGCTGTTCTTCTGGCTGCTCGGGCTGCTGCTCGTGACGATCGGCGCGATCATCGCGGCCGACCG CCGGCATCCGAAGCGCTTCCTGGCCGGCGGCTTCTGGACCGTGTACGGCATCGTGTTCCTGGCCGGCGATCACCTGCCGC CCGCGCTGGTCGGCGCGCTGGTGGTGGCGATGGCGCTGGTGGCCGGGTTCGGCGGGGTGGCGGGCGCCCGGCCCGACGTG CCGGCCGAGCCGGTGCGCCGCGCCGGCGCCGCGCGCCTCGGCAACCGCCTGTTCCTGCCCGCGCTGACGATCCCGTTCGT CACCGTGGCCGGCACGCTGCTCGCGCCGCATCTGCGGTTCGGCGGCGCGGCGCTGCTCGACCCGCACAACGTCACGCTGG TGGCGTTCGGCATCGGATGCGTGAGCGCGTTCGGCTTGGCCTGCCGGATCACGCGCGACTCGGCACGGCAGGGCGTGCGC GAGGCGCGGCGGCTGGTGGACGCGCTGTCGTGGGCGGTGGTGCTGCCGCAGATGCTCGGCATGCTCGGCCTGGTGTTCGC CGACGCCGGCGTGGGCAAGGCGGTGGCGCATCTCGCCACCGCCTACGTGAGCCTCGACCTGCGCATCGTGGCGGTGGCCG TCTACTGCATCGGCATGGCGCTCTTCACGGTGATCATGGGCAACGGCTTCGCGGCGTTCCCGGTGATGACGGGCGGCATC GGCGTGCCGGTGCTGGTCGGGGTGTTCCATGCCAATCCCGCGCCGATGGTGGCGATCGGCATGTTCTCGGGCTATTGCGG CACGCTGCTCACGCCGATGGCGGCCAACTACAACATCGTGCCCGCCGCGCTGCTCGAATTATCAGACAAATACGGCGTGA TCCGCGCCCAGGCGCCCACCGCGCTCGTCATGCTGGCCGTCAACATCGTCCTGTTGAATACCCTGATGTAG
Upstream 100 bases:
>100_bases TCGACGGCTGGCTCGCGCGGCAGGCCGCGTCCGGGCCGGCGGCCGCGGCGCCTGGGTCCGCTTCCGGGCCCGAGGCGGGC CAGGCCCGGGGAGACCGGGC
Downstream 100 bases:
>100_bases CGCGCCGGCATGGCCGCCGGCGGCCCCGCGCCCGACCTCGGGGCACCCCGGCGTGCGCCTGCCGCGCCCGGAAGCCGGCA TCCGGGCCGAAAGCGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTVSLTLFFWLLGLLLVTIGAIIAADRRHPKRFLAGGFWTVYGIVFLAGDHLPPALVGALVVAMALVAGFGGVAGARPDV PAEPVRRAGAARLGNRLFLPALTIPFVTVAGTLLAPHLRFGGAALLDPHNVTLVAFGIGCVSAFGLACRITRDSARQGVR EARRLVDALSWAVVLPQMLGMLGLVFADAGVGKAVAHLATAYVSLDLRIVAVAVYCIGMALFTVIMGNGFAAFPVMTGGI GVPVLVGVFHANPAPMVAIGMFSGYCGTLLTPMAANYNIVPAALLELSDKYGVIRAQAPTALVMLAVNIVLLNTLM
Sequences:
>Translated_316_residues MTVSLTLFFWLLGLLLVTIGAIIAADRRHPKRFLAGGFWTVYGIVFLAGDHLPPALVGALVVAMALVAGFGGVAGARPDV PAEPVRRAGAARLGNRLFLPALTIPFVTVAGTLLAPHLRFGGAALLDPHNVTLVAFGIGCVSAFGLACRITRDSARQGVR EARRLVDALSWAVVLPQMLGMLGLVFADAGVGKAVAHLATAYVSLDLRIVAVAVYCIGMALFTVIMGNGFAAFPVMTGGI GVPVLVGVFHANPAPMVAIGMFSGYCGTLLTPMAANYNIVPAALLELSDKYGVIRAQAPTALVMLAVNIVLLNTLM >Mature_315_residues TVSLTLFFWLLGLLLVTIGAIIAADRRHPKRFLAGGFWTVYGIVFLAGDHLPPALVGALVVAMALVAGFGGVAGARPDVP AEPVRRAGAARLGNRLFLPALTIPFVTVAGTLLAPHLRFGGAALLDPHNVTLVAFGIGCVSAFGLACRITRDSARQGVRE ARRLVDALSWAVVLPQMLGMLGLVFADAGVGKAVAHLATAYVSLDLRIVAVAVYCIGMALFTVIMGNGFAAFPVMTGGIG VPVLVGVFHANPAPMVAIGMFSGYCGTLLTPMAANYNIVPAALLELSDKYGVIRAQAPTALVMLAVNIVLLNTLM
Specific function: Unknown
COG id: COG3817
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32810; Mature: 32679
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSLTLFFWLLGLLLVTIGAIIAADRRHPKRFLAGGFWTVYGIVFLAGDHLPPALVGAL CEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH VVAMALVAGFGGVAGARPDVPAEPVRRAGAARLGNRLFLPALTIPFVTVAGTLLAPHLRF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHC GGAALLDPHNVTLVAFGIGCVSAFGLACRITRDSARQGVREARRLVDALSWAVVLPQMLG CCEEEECCCCEEEEEEHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLGLVFADAGVGKAVAHLATAYVSLDLRIVAVAVYCIGMALFTVIMGNGFAAFPVMTGGI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHCCCC GVPVLVGVFHANPAPMVAIGMFSGYCGTLLTPMAANYNIVPAALLELSDKYGVIRAQAPT CHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCH ALVMLAVNIVLLNTLM HHHHHHHHHHHHHHCC >Mature Secondary Structure TVSLTLFFWLLGLLLVTIGAIIAADRRHPKRFLAGGFWTVYGIVFLAGDHLPPALVGAL EEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH VVAMALVAGFGGVAGARPDVPAEPVRRAGAARLGNRLFLPALTIPFVTVAGTLLAPHLRF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHC GGAALLDPHNVTLVAFGIGCVSAFGLACRITRDSARQGVREARRLVDALSWAVVLPQMLG CCEEEECCCCEEEEEEHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLGLVFADAGVGKAVAHLATAYVSLDLRIVAVAVYCIGMALFTVIMGNGFAAFPVMTGGI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHCCCC GVPVLVGVFHANPAPMVAIGMFSGYCGTLLTPMAANYNIVPAALLELSDKYGVIRAQAPT CHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCH ALVMLAVNIVLLNTLM HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA