Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025435
Identifier: 238025435
GI number: 238025435
Start: 2633750
End: 2634508
Strand: Reverse
Name: 238025435
Synonym: bglu_2g21250
Alternate gene names: NA
Gene position: 2634508-2633750 (Counterclockwise)
Preceding gene: 238025443
Following gene: 238025434
Centisome position: 93.18
GC content: 74.57
Gene sequence:
>759_bases ATGTCGTCCGCAGTCAATCTGACTCCGCTGATCGGCGTAGCGCTGATCGCCGCCGGTTTCGCGCTGCGCTTCCATCCGAT GCTGATCGTCACGCTCGCGGCGATCGCCACCGGCCTGGCCGCGCACTTTTCGCCCGGGCAGCTGCTGGCCGTGATCGGCA CCGGCTTCCTGAAGACGCGCACCATCCCGCTCATCATCCTGCTGCCGCTCGCGGTGATCGGCCTGCTGGAGCGGCACGGG CTGCGCGAGCGCGCGCAGGCCTGGATCGGCGGCATCCGCGCGGCCACGCCGGGCCGGCTGCTGCTGGCCTACCTGCTGGC GCGCGAGCTGACCGCCGCGCTCGGGCTGACCGGCCTGGGCGGCCATCCGCAGATGGTCCGCCCGCTGGTCGCGCCGATGG CCGAGGGCGCTGCGCAGACGCGCTTCGGCCCGCTCGGCGACGCGGTGCGCCAGCGGCTGCGCGCGTTCGCGGCCTCGGCC GACAACGTCGGGCTGTTCTTCGGCGAGGACGTGTTCGTGGCGTTCGGCGCGATCGTGCTGATGGTCACCTTCCTGCGCGA GGCCGGCATCGCCGTCGAGCCGATGCAGGTCGCGCTGTATGGCCTGCCCACCGCGCTGGCGGCGTTCCTGGTCCACGGCT TGCGGCTCTGGCGGCTCGACGGCTGGCTCGCGCGGCAGGCCGCGTCCGGGCCGGCGGCCGCGGCGCCTGGGTCCGCTTCC GGGCCCGAGGCGGGCCAGGCCCGGGGAGACCGGGCATGA
Upstream 100 bases:
>100_bases GTCGCGGCGGTATCGTCACCCACAGCGTCGCGCGCCGTGCGCGACGCAGGCCGCCCCGCCGCCCCGGCAGGGCGCTCACC ACCGACCAGGAGAATCACCG
Downstream 100 bases:
>100_bases CGGTCTCGCTGACGCTGTTCTTCTGGCTGCTCGGGCTGCTGCTCGTGACGATCGGCGCGATCATCGCGGCCGACCGCCGG CATCCGAAGCGCTTCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSSAVNLTPLIGVALIAAGFALRFHPMLIVTLAAIATGLAAHFSPGQLLAVIGTGFLKTRTIPLIILLPLAVIGLLERHG LRERAQAWIGGIRAATPGRLLLAYLLARELTAALGLTGLGGHPQMVRPLVAPMAEGAAQTRFGPLGDAVRQRLRAFAASA DNVGLFFGEDVFVAFGAIVLMVTFLREAGIAVEPMQVALYGLPTALAAFLVHGLRLWRLDGWLARQAASGPAAAAPGSAS GPEAGQARGDRA
Sequences:
>Translated_252_residues MSSAVNLTPLIGVALIAAGFALRFHPMLIVTLAAIATGLAAHFSPGQLLAVIGTGFLKTRTIPLIILLPLAVIGLLERHG LRERAQAWIGGIRAATPGRLLLAYLLARELTAALGLTGLGGHPQMVRPLVAPMAEGAAQTRFGPLGDAVRQRLRAFAASA DNVGLFFGEDVFVAFGAIVLMVTFLREAGIAVEPMQVALYGLPTALAAFLVHGLRLWRLDGWLARQAASGPAAAAPGSAS GPEAGQARGDRA >Mature_251_residues SSAVNLTPLIGVALIAAGFALRFHPMLIVTLAAIATGLAAHFSPGQLLAVIGTGFLKTRTIPLIILLPLAVIGLLERHGL RERAQAWIGGIRAATPGRLLLAYLLARELTAALGLTGLGGHPQMVRPLVAPMAEGAAQTRFGPLGDAVRQRLRAFAASAD NVGLFFGEDVFVAFGAIVLMVTFLREAGIAVEPMQVALYGLPTALAAFLVHGLRLWRLDGWLARQAASGPAAAAPGSASG PEAGQARGDRA
Specific function: Unknown
COG id: COG3819
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26086; Mature: 25955
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAVNLTPLIGVALIAAGFALRFHPMLIVTLAAIATGLAAHFSPGQLLAVIGTGFLKTR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHH TIPLIILLPLAVIGLLERHGLRERAQAWIGGIRAATPGRLLLAYLLARELTAALGLTGLG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GHPQMVRPLVAPMAEGAAQTRFGPLGDAVRQRLRAFAASADNVGLFFGEDVFVAFGAIVL CCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHH MVTFLREAGIAVEPMQVALYGLPTALAAFLVHGLRLWRLDGWLARQAASGPAAAAPGSAS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GPEAGQARGDRA CCCCCCCCCCCC >Mature Secondary Structure SSAVNLTPLIGVALIAAGFALRFHPMLIVTLAAIATGLAAHFSPGQLLAVIGTGFLKTR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHH TIPLIILLPLAVIGLLERHGLRERAQAWIGGIRAATPGRLLLAYLLARELTAALGLTGLG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GHPQMVRPLVAPMAEGAAQTRFGPLGDAVRQRLRAFAASADNVGLFFGEDVFVAFGAIVL CCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHH MVTFLREAGIAVEPMQVALYGLPTALAAFLVHGLRLWRLDGWLARQAASGPAAAAPGSAS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GPEAGQARGDRA CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA