Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is xylZ [H]
Identifier: 238025431
GI number: 238025431
Start: 2629497
End: 2630537
Strand: Reverse
Name: xylZ [H]
Synonym: bglu_2g21210
Alternate gene names: 238025431
Gene position: 2630537-2629497 (Counterclockwise)
Preceding gene: 238025432
Following gene: 238025430
Centisome position: 93.04
GC content: 64.65
Gene sequence:
>1041_bases ATGAACCATAGGGTCGCTTTCAGCTTTGCCGACGGCAAGACCGTTTTCTTCGACATCCACAAGGACGAGCTGCTGCTCGA CGCCGCGCTGCGCAACGGCGTGAACATTCCGCTCGACTGCCGCGAAGGCGTTTGCGGCACTTGCCAGGGGCGTTGCGAGT CGGGCCGCTATACCCAGGACTACGTCGACGAGGAAGCCCTGTCGCCGGCCGATCTCGCCGCGCGCAAGATGCTTTCATGC CAGACGCGGGTGCAGTCCGATGCGTCGTTCTACTTCGACTTCGCTTCGGGCCTGTGCAGCGCGGCTGGAACGCAATCGCT CACGGGCCGGGTCGCGGCGGTCAAGCAGGTATCCGAGACCACCGCCATCCTGCACGTGGACGCAAGCGCCCATGAGCGGC GCATCGATTTTCTGCCGGGGCAGTACGCACGGCTGAAGGTGCCGGGCACGGACGTTTGGCGTTCCTATTCGTTCGCCAAC CGGCCGGACGACGGCAACCAGTTGCAGTTCCTGATTCGCCTGCTGCCCGACGGCGCGATGAGCAACTATCTGCGCGAACG TTGCGCGCCGGGTCAGACGATCGAGTTCGAGGCACCGCTCGGGACCTTCTATCTGCGCGAGGCGGAGCGGCCCCTCGTGA TGGTCGCGGGCGGCACGGGTCTTTCGGCATTTCTCGGCATGCTCGACGAGCTCGCGCATCAGGGCGGCTGCGCGCGGCAG GTGCGTCTCTACTATGGCGTGACCCACGCTCGCGACCTCTGCGAGCTCGAGCGCCTGACGGCATACGCGCAGCGCATCGC CAACTTCTCGGCCGAGATCGTGGTGATGAACGCCTCGGACGGGTGGCAGGGAAAAACGGGGCTCATCCCCGAGCATTTCG ACCGGGACATGCTGGCGGCGGCGCCGTTCGACATGTACGTATGCGGACCGCCGCCCATGGTGGAAGCCATCAAGACATGG CTTGCGCGAGAACGGGTGAGCGATCATCGCCTCTACTACGAGAAATTCGCCGAGAGCAACAGCGCGCAACAGGCTGCATA A
Upstream 100 bases:
>100_bases GGCGAGAGCTGGAAGATCATGCGCAAGCACGTGCTGCTGCTGAACGACACGATCAACGCCGTACTCGATTTCTACCATCT CTGATCCGGAGCGACGCGTC
Downstream 100 bases:
>100_bases GCTTGCAGGTCAGGGTGTCTTAGTATTTTTTCCGGGCACGGTGTGGTTTACCATCGAACCACGACTAACCGCCCGGTGAC ACCCCCATGCATACGTCCGC
Product: anthranilate dioxygenase reductase
Products: NA
Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNHRVAFSFADGKTVFFDIHKDELLLDAALRNGVNIPLDCREGVCGTCQGRCESGRYTQDYVDEEALSPADLAARKMLSC QTRVQSDASFYFDFASGLCSAAGTQSLTGRVAAVKQVSETTAILHVDASAHERRIDFLPGQYARLKVPGTDVWRSYSFAN RPDDGNQLQFLIRLLPDGAMSNYLRERCAPGQTIEFEAPLGTFYLREAERPLVMVAGGTGLSAFLGMLDELAHQGGCARQ VRLYYGVTHARDLCELERLTAYAQRIANFSAEIVVMNASDGWQGKTGLIPEHFDRDMLAAAPFDMYVCGPPPMVEAIKTW LARERVSDHRLYYEKFAESNSAQQAA
Sequences:
>Translated_346_residues MNHRVAFSFADGKTVFFDIHKDELLLDAALRNGVNIPLDCREGVCGTCQGRCESGRYTQDYVDEEALSPADLAARKMLSC QTRVQSDASFYFDFASGLCSAAGTQSLTGRVAAVKQVSETTAILHVDASAHERRIDFLPGQYARLKVPGTDVWRSYSFAN RPDDGNQLQFLIRLLPDGAMSNYLRERCAPGQTIEFEAPLGTFYLREAERPLVMVAGGTGLSAFLGMLDELAHQGGCARQ VRLYYGVTHARDLCELERLTAYAQRIANFSAEIVVMNASDGWQGKTGLIPEHFDRDMLAAAPFDMYVCGPPPMVEAIKTW LARERVSDHRLYYEKFAESNSAQQAA >Mature_346_residues MNHRVAFSFADGKTVFFDIHKDELLLDAALRNGVNIPLDCREGVCGTCQGRCESGRYTQDYVDEEALSPADLAARKMLSC QTRVQSDASFYFDFASGLCSAAGTQSLTGRVAAVKQVSETTAILHVDASAHERRIDFLPGQYARLKVPGTDVWRSYSFAN RPDDGNQLQFLIRLLPDGAMSNYLRERCAPGQTIEFEAPLGTFYLREAERPLVMVAGGTGLSAFLGMLDELAHQGGCARQ VRLYYGVTHARDLCELERLTAYAQRIANFSAEIVVMNASDGWQGKTGLIPEHFDRDMLAAAPFDMYVCGPPPMVEAIKTW LARERVSDHRLYYEKFAESNSAQQAA
Specific function: Electron transfer component of toluate 1,2-dioxygenase system [H]
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI2367314, Length=238, Percent_Identity=27.3109243697479, Blast_Score=72, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6322146, Length=192, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323510, Length=202, Percent_Identity=25.7425742574257, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323552, Length=178, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.3 [H]
Molecular weight: Translated: 38323; Mature: 38323
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHRVAFSFADGKTVFFDIHKDELLLDAALRNGVNIPLDCREGVCGTCQGRCESGRYTQD CCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH YVDEEALSPADLAARKMLSCQTRVQSDASFYFDFASGLCSAAGTQSLTGRVAAVKQVSET HHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHC TAILHVDASAHERRIDFLPGQYARLKVPGTDVWRSYSFANRPDDGNQLQFLIRLLPDGAM EEEEEECCCCCCCEECCCCCCCEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHH SNYLRERCAPGQTIEFEAPLGTFYLREAERPLVMVAGGTGLSAFLGMLDELAHQGGCARQ HHHHHHHCCCCCEEEEECCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHE VRLYYGVTHARDLCELERLTAYAQRIANFSAEIVVMNASDGWQGKTGLIPEHFDRDMLAA EEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHCCCCHHHC APFDMYVCGPPPMVEAIKTWLARERVSDHRLYYEKFAESNSAQQAA CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNHRVAFSFADGKTVFFDIHKDELLLDAALRNGVNIPLDCREGVCGTCQGRCESGRYTQD CCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH YVDEEALSPADLAARKMLSCQTRVQSDASFYFDFASGLCSAAGTQSLTGRVAAVKQVSET HHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHC TAILHVDASAHERRIDFLPGQYARLKVPGTDVWRSYSFANRPDDGNQLQFLIRLLPDGAM EEEEEECCCCCCCEECCCCCCCEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHH SNYLRERCAPGQTIEFEAPLGTFYLREAERPLVMVAGGTGLSAFLGMLDELAHQGGCARQ HHHHHHHCCCCCEEEEECCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHE VRLYYGVTHARDLCELERLTAYAQRIANFSAEIVVMNASDGWQGKTGLIPEHFDRDMLAA EEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHCCCCHHHC APFDMYVCGPPPMVEAIKTWLARERVSDHRLYYEKFAESNSAQQAA CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1938949 [H]