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The map label for this gene is tse [H]

Identifier: 238025406

GI number: 238025406

Start: 2590863

End: 2592443

Strand: Reverse

Name: tse [H]

Synonym: bglu_2g20940

Alternate gene names: 238025406

Gene position: 2592443-2590863 (Counterclockwise)

Preceding gene: 238025408

Following gene: 238025404

Centisome position: 91.69

GC content: 63.31

Gene sequence:

>1581_bases
ATGCTACCCAGTTATCGCGACTTGTCCATTGGCGTACGTCTCGCCATTGCCTTCTTCATCGCGGCCTTGATGACCGCACT
GCTGGGTGCCGTCGCCTACACCCGGCTCTCGTCCATCTCCGAGCAGTGGCGGACCTACGAGTCGGTGACGCTGGCGAAGC
TGCAGTTGCTCCAGCATGCGAAAGACGTGTTCGGCGACGCGGTTCACAACTACAAGGACTATGTGCTGCGCGGTGGCGAC
TACCGGACGAAGTTTCTCGCCAACCTCGACGCAATCGATCAGGCTGCACAAACGTCCTTGGAGTTGGGAACCTTCGGATC
GGGCGAGTCCGATGCCGTCCGTACGCTCACCGCGGCCACCGCCGGCTACCGTGCGTCGCTCGACAAACTGGATGCGCTCG
TCAATTCAGGCGCGTCGATTGAAGCCCGTGACCACGTCGTCAGCGGGGCCGACAAGCCGATCGGCAAGGCGCTCGATGTC
CTGATTGCGATCGGCAGGGAGCGCACTCATGAACAGGGTAAGAACGTGACCCATCTCGCATCAGTCGCGGAATCGACCAT
CATCGCTGTCACAATCACAGCGCTGGCTGCGGCGGTACTGCTGGCATTCTTCATCACCCGCGACATCACCCTGCCGATCG
GTGTTGCCGTATCCGCTGCCGAGGCGGTGGCACGGGGCGATCTCACACAAGACATCACCACCGACCGCGCCGACGAGACC
GGCCGCTTGCTGCGTGCCCTGCGCGACATGAACGAGAATCTGCTGCAGGTCGTCGGACGCGTGCGTAGCGGTGCCGACAC
CATGGCGACGGCCACAAGCGAGATCGCCGCGGGCAATCATGACCTTTCCTCGCGCACCGAAGAACAGGCGAGTTCGCTGC
AGGAAACCGCCTCTAGCATGGAAGAACTGACGGCCACTGTCCGGCAGAATGCGGACAACGCCCATCGGGGAAGCACCTTG
GCGACCAGTGCGGCCGATGTTGCACACCAGGGCAGTGCGGTCGTCGGCAAGGTCGTGAGAACGATGGAGGAGATCAGCGA
GAGCTCGAAGAGGATTTCCGATATCACGGGCGTCGTCGAGGGTATCGCGTTCCAGACCAACATCCTCGCGCTCAACGCAG
CCGTCGAAGCCGCTCGCGCCGGCGACCAGGGGCGCGGCTTCGCCGTCGTGGCAGGTGAGGTGCGCAACCTTGCCCAACGT
TCGGGCAGCGCGGCGAAGGAAATCAAAGAATTGATCGCGGCGTCCGTGCGGAAGGTTCAGGACGGCACGAATCTCGCATC
CGAGGCGGGCGCCACGATGTCGGAAGTCACGCGTGCGGTGGCGAGGGTCAGCGACATTATGGGCGAAATTGCGGCCGCGT
CGACCGAACAGAGCCGCGGGATCGAGCAGGTCAATCTCGCCGTCTCGCAGATGGATCAGGTCACCCAGCAAAACGCCGCA
CTGGTCGAGCAAGCCGCGGCCGCCTCGGCATCGTTACAGGAACAGGGACGGCAATTGAGCGAGGTCGTCGCGTTTTTTCG
GTTGCGGTCCGGCACGCGGCTCCCAATCCGGCGGCCAGCAGGCCATCACGATGCTGCGTGA

Upstream 100 bases:

>100_bases
GCCCGCTGTCGTCGCGCCGTTACGCCATATGTTCCTTCTCCCGTCGCGGGCTTCTGGCAGCAGGTTTGATGGCCTAGAGT
CAACATAAGGACGACACCCC

Downstream 100 bases:

>100_bases
GCGTAGCAGCGGGTATTGTCAGGGTGTTGCAGGAGCGGCTTGTATAGCAGGGCGTGCACAACTCCGTCCATGCCCTCGCG
CTGCATCTTGATTTGCCGAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MLPSYRDLSIGVRLAIAFFIAALMTALLGAVAYTRLSSISEQWRTYESVTLAKLQLLQHAKDVFGDAVHNYKDYVLRGGD
YRTKFLANLDAIDQAAQTSLELGTFGSGESDAVRTLTAATAGYRASLDKLDALVNSGASIEARDHVVSGADKPIGKALDV
LIAIGRERTHEQGKNVTHLASVAESTIIAVTITALAAAVLLAFFITRDITLPIGVAVSAAEAVARGDLTQDITTDRADET
GRLLRALRDMNENLLQVVGRVRSGADTMATATSEIAAGNHDLSSRTEEQASSLQETASSMEELTATVRQNADNAHRGSTL
ATSAADVAHQGSAVVGKVVRTMEEISESSKRISDITGVVEGIAFQTNILALNAAVEAARAGDQGRGFAVVAGEVRNLAQR
SGSAAKEIKELIAASVRKVQDGTNLASEAGATMSEVTRAVARVSDIMGEIAAASTEQSRGIEQVNLAVSQMDQVTQQNAA
LVEQAAAASASLQEQGRQLSEVVAFFRLRSGTRLPIRRPAGHHDAA

Sequences:

>Translated_526_residues
MLPSYRDLSIGVRLAIAFFIAALMTALLGAVAYTRLSSISEQWRTYESVTLAKLQLLQHAKDVFGDAVHNYKDYVLRGGD
YRTKFLANLDAIDQAAQTSLELGTFGSGESDAVRTLTAATAGYRASLDKLDALVNSGASIEARDHVVSGADKPIGKALDV
LIAIGRERTHEQGKNVTHLASVAESTIIAVTITALAAAVLLAFFITRDITLPIGVAVSAAEAVARGDLTQDITTDRADET
GRLLRALRDMNENLLQVVGRVRSGADTMATATSEIAAGNHDLSSRTEEQASSLQETASSMEELTATVRQNADNAHRGSTL
ATSAADVAHQGSAVVGKVVRTMEEISESSKRISDITGVVEGIAFQTNILALNAAVEAARAGDQGRGFAVVAGEVRNLAQR
SGSAAKEIKELIAASVRKVQDGTNLASEAGATMSEVTRAVARVSDIMGEIAAASTEQSRGIEQVNLAVSQMDQVTQQNAA
LVEQAAAASASLQEQGRQLSEVVAFFRLRSGTRLPIRRPAGHHDAA
>Mature_526_residues
MLPSYRDLSIGVRLAIAFFIAALMTALLGAVAYTRLSSISEQWRTYESVTLAKLQLLQHAKDVFGDAVHNYKDYVLRGGD
YRTKFLANLDAIDQAAQTSLELGTFGSGESDAVRTLTAATAGYRASLDKLDALVNSGASIEARDHVVSGADKPIGKALDV
LIAIGRERTHEQGKNVTHLASVAESTIIAVTITALAAAVLLAFFITRDITLPIGVAVSAAEAVARGDLTQDITTDRADET
GRLLRALRDMNENLLQVVGRVRSGADTMATATSEIAAGNHDLSSRTEEQASSLQETASSMEELTATVRQNADNAHRGSTL
ATSAADVAHQGSAVVGKVVRTMEEISESSKRISDITGVVEGIAFQTNILALNAAVEAARAGDQGRGFAVVAGEVRNLAQR
SGSAAKEIKELIAASVRKVQDGTNLASEAGATMSEVTRAVARVSDIMGEIAAASTEQSRGIEQVNLAVSQMDQVTQQNAA
LVEQAAAASASLQEQGRQLSEVVAFFRLRSGTRLPIRRPAGHHDAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=327, Percent_Identity=57.4923547400612, Blast_Score=323, Evalue=1e-89,
Organism=Escherichia coli, GI1788195, Length=328, Percent_Identity=56.4024390243902, Blast_Score=314, Evalue=9e-87,
Organism=Escherichia coli, GI1787690, Length=310, Percent_Identity=57.741935483871, Blast_Score=313, Evalue=2e-86,
Organism=Escherichia coli, GI1788194, Length=308, Percent_Identity=56.1688311688312, Blast_Score=305, Evalue=7e-84,
Organism=Escherichia coli, GI1789453, Length=321, Percent_Identity=36.7601246105919, Blast_Score=201, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 55420; Mature: 55420

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSYRDLSIGVRLAIAFFIAALMTALLGAVAYTRLSSISEQWRTYESVTLAKLQLLQHA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDVFGDAVHNYKDYVLRGGDYRTKFLANLDAIDQAAQTSLELGTFGSGESDAVRTLTAAT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AGYRASLDKLDALVNSGASIEARDHVVSGADKPIGKALDVLIAIGRERTHEQGKNVTHLA
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHH
SVAESTIIAVTITALAAAVLLAFFITRDITLPIGVAVSAAEAVARGDLTQDITTDRADET
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHH
GRLLRALRDMNENLLQVVGRVRSGADTMATATSEIAAGNHDLSSRTEEQASSLQETASSM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EELTATVRQNADNAHRGSTLATSAADVAHQGSAVVGKVVRTMEEISESSKRISDITGVVE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAFQTNILALNAAVEAARAGDQGRGFAVVAGEVRNLAQRSGSAAKEIKELIAASVRKVQ
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DGTNLASEAGATMSEVTRAVARVSDIMGEIAAASTEQSRGIEQVNLAVSQMDQVTQQNAA
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
LVEQAAAASASLQEQGRQLSEVVAFFRLRSGTRLPIRRPAGHHDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPSYRDLSIGVRLAIAFFIAALMTALLGAVAYTRLSSISEQWRTYESVTLAKLQLLQHA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDVFGDAVHNYKDYVLRGGDYRTKFLANLDAIDQAAQTSLELGTFGSGESDAVRTLTAAT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AGYRASLDKLDALVNSGASIEARDHVVSGADKPIGKALDVLIAIGRERTHEQGKNVTHLA
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHH
SVAESTIIAVTITALAAAVLLAFFITRDITLPIGVAVSAAEAVARGDLTQDITTDRADET
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHH
GRLLRALRDMNENLLQVVGRVRSGADTMATATSEIAAGNHDLSSRTEEQASSLQETASSM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EELTATVRQNADNAHRGSTLATSAADVAHQGSAVVGKVVRTMEEISESSKRISDITGVVE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAFQTNILALNAAVEAARAGDQGRGFAVVAGEVRNLAQRSGSAAKEIKELIAASVRKVQ
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DGTNLASEAGATMSEVTRAVARVSDIMGEIAAASTEQSRGIEQVNLAVSQMDQVTQQNAA
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
LVEQAAAASASLQEQGRQLSEVVAFFRLRSGTRLPIRRPAGHHDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]