Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025408
Identifier: 238025408
GI number: 238025408
Start: 2596373
End: 2597434
Strand: Reverse
Name: 238025408
Synonym: bglu_2g20970
Alternate gene names: NA
Gene position: 2597434-2596373 (Counterclockwise)
Preceding gene: 238025409
Following gene: 238025406
Centisome position: 91.87
GC content: 59.7
Gene sequence:
>1062_bases ATGATGCATTGGGATCACAAACTCGGTCGAATCGTTTTTCTGGCGGGCGCCTTGATGGTGGCCTTCGCTGCGCCGGCCGC GCACGCGCAAAGCTTCGAAACGCCCGCGCCGGTGTCCTTGCCAAAGGACGAGGCGCCCCATCACAGCCAAGAAGAGTGGT GGTATTTCGTGGGCCATCTGAAAGGGGTCGACCCGAGCGGCAAGGAGCGCGAGTTCGGCTATGAAGTCACCGTCTTCCAA ACCTGGCCGATTCCGTCGGGTGAGGCGAATTACACGTGGCACTTTGCCGTCACCGATGTCACCAACAAGCGCTTCCAGTC CGAGGAACGGGTGAGCTCCGCCGATATCCCGCGGCAGCTGGACAGCTTCTCCTTCACGAACGCCGATTGGTCGGTTGCCG GCAGTGCCCAGAACTATGCGATCAAGGCGAAGCTCGGTGATGATCGCTACGGCATCGATCTTCAGACCAGCTCAGACCAG CCCTTCGTCCTTCATAACGGTAACGGCGTGGTTCCCTACATGCCGCTTAGCGATACATCCGCCTATTATTCGTCGACGGC GCTGCACACGACCGGGACGATCTATGACAACGGCGTCCCGATCAAGGTGACCGGGATTTCCTGGCAGGACCGGCAATGGT TCAATTTCAAGAATACGGGGGGATGGAATTGGTTTGCGATACAGCTCGACAACAATACCCAGTACATGCTGTATTTCCTC CAGAACTTTCCGGCGGGTGACATCGTGTTGAGATACGGCACGAAGGTCACGAACGGCGTCGCCACGCCGGTCGATCCCAA TACCCTGAGCCTCACCGTGCTCGATCACTGGACCAGCCCGAAGACCCTCTATACCTACCCCTCGAAATGGCAGATCGGCC TTCCCGAAGGCACGATGACGGTAACGCCGCTGGTGCAGAATCAGGAACTGAGCTGGCCGGGCCATCGGACCTACTTCGAG GGCGACTCCGCGATCGCCGGAACGCTCGATGGCCGGCCGGTGACGGGGCGTGGTTACACCGAAGTCAATCCCGCATTCGA GCCGCTCAGCTCGCTGCCCTGA
Upstream 100 bases:
>100_bases CCCTGAGGCGGCCCGCGATGTCGCTGCCGTGCCCGATGAGCGGTCGCGCGCGATCGGCGTGCCGGCCAGCTCGCCTTACC TTTCTTACTCCATGGAGCAT
Downstream 100 bases:
>100_bases TGGGGCGGATTCAAGCGCGGTCGCAACACCTTTAAGCGAGTAGGGGTTGCGCGAAGCGAACGGGTCGACGCCGATAGCCG CCGGCGGGGCGCGCAGCGAT
Product: Secreted hydrolase-like protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Hydroxyneurosporene Synthase; Lipoprotein; ABC Transporter Type C Secreted Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MMHWDHKLGRIVFLAGALMVAFAAPAAHAQSFETPAPVSLPKDEAPHHSQEEWWYFVGHLKGVDPSGKEREFGYEVTVFQ TWPIPSGEANYTWHFAVTDVTNKRFQSEERVSSADIPRQLDSFSFTNADWSVAGSAQNYAIKAKLGDDRYGIDLQTSSDQ PFVLHNGNGVVPYMPLSDTSAYYSSTALHTTGTIYDNGVPIKVTGISWQDRQWFNFKNTGGWNWFAIQLDNNTQYMLYFL QNFPAGDIVLRYGTKVTNGVATPVDPNTLSLTVLDHWTSPKTLYTYPSKWQIGLPEGTMTVTPLVQNQELSWPGHRTYFE GDSAIAGTLDGRPVTGRGYTEVNPAFEPLSSLP
Sequences:
>Translated_353_residues MMHWDHKLGRIVFLAGALMVAFAAPAAHAQSFETPAPVSLPKDEAPHHSQEEWWYFVGHLKGVDPSGKEREFGYEVTVFQ TWPIPSGEANYTWHFAVTDVTNKRFQSEERVSSADIPRQLDSFSFTNADWSVAGSAQNYAIKAKLGDDRYGIDLQTSSDQ PFVLHNGNGVVPYMPLSDTSAYYSSTALHTTGTIYDNGVPIKVTGISWQDRQWFNFKNTGGWNWFAIQLDNNTQYMLYFL QNFPAGDIVLRYGTKVTNGVATPVDPNTLSLTVLDHWTSPKTLYTYPSKWQIGLPEGTMTVTPLVQNQELSWPGHRTYFE GDSAIAGTLDGRPVTGRGYTEVNPAFEPLSSLP >Mature_353_residues MMHWDHKLGRIVFLAGALMVAFAAPAAHAQSFETPAPVSLPKDEAPHHSQEEWWYFVGHLKGVDPSGKEREFGYEVTVFQ TWPIPSGEANYTWHFAVTDVTNKRFQSEERVSSADIPRQLDSFSFTNADWSVAGSAQNYAIKAKLGDDRYGIDLQTSSDQ PFVLHNGNGVVPYMPLSDTSAYYSSTALHTTGTIYDNGVPIKVTGISWQDRQWFNFKNTGGWNWFAIQLDNNTQYMLYFL QNFPAGDIVLRYGTKVTNGVATPVDPNTLSLTVLDHWTSPKTLYTYPSKWQIGLPEGTMTVTPLVQNQELSWPGHRTYFE GDSAIAGTLDGRPVTGRGYTEVNPAFEPLSSLP
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39416; Mature: 39416
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHWDHKLGRIVFLAGALMVAFAAPAAHAQSFETPAPVSLPKDEAPHHSQEEWWYFVGHL CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE KGVDPSGKEREFGYEVTVFQTWPIPSGEANYTWHFAVTDVTNKRFQSEERVSSADIPRQL ECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCHHHCCHHHHCCCCCCHHH DSFSFTNADWSVAGSAQNYAIKAKLGDDRYGIDLQTSSDQPFVLHNGNGVVPYMPLSDTS HCCEECCCCEEEECCCCCEEEEEEECCCEEEEEEECCCCCCEEEECCCCEEEEEECCCCC AYYSSTALHTTGTIYDNGVPIKVTGISWQDRQWFNFKNTGGWNWFAIQLDNNTQYMLYFL HHHCCEEEEEECEEEECCEEEEEEECCCCCCEEECCCCCCCEEEEEEEECCCCEEEEEEE QNFPAGDIVLRYGTKVTNGVATPVDPNTLSLTVLDHWTSPKTLYTYPSKWQIGLPEGTMT ECCCCCCEEEEECCEECCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCEEEECCCCCEE VTPLVQNQELSWPGHRTYFEGDSAIAGTLDGRPVTGRGYTEVNPAFEPLSSLP EEEEEECCCCCCCCCCEEECCCCEEEECCCCCEECCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MMHWDHKLGRIVFLAGALMVAFAAPAAHAQSFETPAPVSLPKDEAPHHSQEEWWYFVGHL CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE KGVDPSGKEREFGYEVTVFQTWPIPSGEANYTWHFAVTDVTNKRFQSEERVSSADIPRQL ECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCHHHCCHHHHCCCCCCHHH DSFSFTNADWSVAGSAQNYAIKAKLGDDRYGIDLQTSSDQPFVLHNGNGVVPYMPLSDTS HCCEECCCCEEEECCCCCEEEEEEECCCEEEEEEECCCCCCEEEECCCCEEEEEECCCCC AYYSSTALHTTGTIYDNGVPIKVTGISWQDRQWFNFKNTGGWNWFAIQLDNNTQYMLYFL HHHCCEEEEEECEEEECCEEEEEEECCCCCCEEECCCCCCCEEEEEEEECCCCEEEEEEE QNFPAGDIVLRYGTKVTNGVATPVDPNTLSLTVLDHWTSPKTLYTYPSKWQIGLPEGTMT ECCCCCCEEEEECCEECCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCEEEECCCCCEE VTPLVQNQELSWPGHRTYFEGDSAIAGTLDGRPVTGRGYTEVNPAFEPLSSLP EEEEEECCCCCCCCCCEEECCCCEEEECCCCCEECCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA