Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is katE [H]
Identifier: 238025291
GI number: 238025291
Start: 2440876
End: 2442972
Strand: Reverse
Name: katE [H]
Synonym: bglu_2g19650
Alternate gene names: 238025291
Gene position: 2442972-2440876 (Counterclockwise)
Preceding gene: 238025292
Following gene: 238025288
Centisome position: 86.41
GC content: 68.72
Gene sequence:
>2097_bases ATGGCCAAATCGAAAGCGACCCAGGATGCCGATGTCATCGGTCACGGCGGCGAGCTGCATCAGCAACACACGGGACGCGG CAAGCAGGATCCCGAAATTCTGACCACCAACTTCGGCGTCCCGATCTCCGACAACCAGAACAGCCTGCGCGCGGGCGAGC GCGGCCCGACGCTGCTCGAGGACTTCGTGCTGCGCGAGAAGATCTTCCACTTCGATCACGAGCGGATTCCGGAGCGCATC GTGCATGCGCGCGGCAGCGGCGCGCATGGCGTGTTCAAGTGCACGCGCGCGATTCCCGAGCTCACGCGCGCGAACCTGTT CCAGCAGGCGGGCCAGGAGACCGAGGTGTTCGTGCGCTTTTCGACGGTGGCGGGCGGTGCGGGCTCGGTGGACACGCCGC GCGACGTGCGCGGCTTCGCCGTGAAGTTCTACACGCGCGAGGGCAACTGGGACCTGGTGGGCAACAACATTCCGGTGTTC TTCATCCAGGACGCGATCAAGTTCCCGGACCTGATCCACAGCGTGAAGATGGAGGCCGATCGCGGCTACCCGCAGGCGGC CTCGGCGCACGACACGTTCTGGGACTTCGCGAGCCTGATGCCCGAGAGCACCCACATGCTGATGTGGGCGATGTCCGACC GCGCGATTCCGCGTTCGCTGCGCATGATGCAGGGCTTCGGCGTGCATACCTTCCGCTTCGTCAATGCGAAGGGCGAGGGG CGCTACGTGAAGTTCCACTGGACGCCGGTGCTCGGCGTGCAGTCCACCTGCTGGGACGAGGCCGTGAAGATCGCCGGCGC GGACCCCGACTATCATCGCCGCGACCTGTTCGAGGCGATCGAGGCGGGCGACTTCCCCGAGTGGGATCTCGGCATCCAGG TGTTCGACGAGGCGTGGGCCGCGCAGCAGCCCTACGACGTGCTCGACGCCACCAAGCTGATTCCCGAGGAGGAGATTCCG GTCGAGACGATCGGCCGGCTCACGCTCAACGCCAACGTGAAGAACTTCTTCGCCGAGACCGAGCAGGCCGCGTTCCTGCC GTCGAACGTGGTGCCCGGCATCGACTTCAGCAACGATCCGCTGCTGCAGGGGCGCCTGTTCAGCTACCTCGACACGCAGA AGTCGCGGCTGGGCACCACCAACTTCCACCAGATCCCGATCAACGCGCCGCGCTGCCCGTTCCACAACATGCAGCGCGAC GGGATGATGCAGACCCAGGTGCCGGCCGGCCGCGCCAACTACGAGCCGAACTCGCTTGCCCACGCGGGCGAGGACGGCGG CCCGCGCGAGGCGCCGGCCGAGGGCTTCACCACCTTCCAGGCCAACGCCGAGCGCAATGATCCCGCGGCCAAGCTGCGCG TGCGTGCCGAGTTGTTCGCCGACCACTACAGCCAGGCCCGCCTGCTGTTCCGTTCGCTGGAGCCGATCGAGCAGGCGCAT CTGGCCTCGGCGTTCGTGTTCGAGCTGTCGAAGGTGTCGCTGCAGCACGTGCGCTCGCGGATGGTCTCGCGGCTGCGCAA CGTCGACGAATCGCTCGCGCAGCGCGTGGCCGACGGCCTAGCGATCGCGCTGCCCGACGCCGCGCCGCCGGCGCGCGAGC CGATCGACATGAAGCCGTCGCCGGCGCTGTCGATCGTCGCCAACGCCAAGCCCACGCTGCGCGGCCGCAAGGTGGGCATT CTGTTCGACGAGGGCTCGGACAAGGCCGCGATCGAGGCGCTGGTGGCGTCGATCGAGAAGGCCGGCGGGCGCGCCATGCT GATCGCACCGAAGGTGGGCGGGGTGCCGGTGCAGGGCGGCACGCTGACGGCGCACGGGCAGCTGGCCGGCTCGCCGTCGG TGCTGGTCGATGCCGTGGCGCTGGCGCTGACCGAGGACGCCGCGCGCAAGCTCGCGCAGGATGCGGCGGCGCTCTCGTTC GTGCTCGACGCGTTCGCCCACCTGAAGGCGATCGGCCACACGCCGGGCGCGCAGCCGCTGCTGGAGCGGGCCGGCATCCA GCCCGACGCGGGCGTGACCGATCTTGGCGAGGCCTTCGTGAAGGCGGCGGCCAGGCGCTTCTACGATCGTGAGCCGAAGC TGCGCGAACTGGCCTGA
Upstream 100 bases:
>100_bases GTCCGCCGCGATCGATGCCGATTCGAGCACCGCCGGCGCTCCGCCGCGCCGCGCGCCGATCGGCTGTTATAGACCCCACA ACCGGAAGTGGAGGAAGTGC
Downstream 100 bases:
>100_bases CGAGCGGCGCGCGTGAACCAAAAAGCGGCGCCGGTGAAGGCCGGCGCCGCTTGTTTCCATGCTGTTTCAGGTCTGCTCCG CGCGGCGTCTGCCGCGCGGC
Product: Catalase
Products: NA
Alternate protein names: KAT2 [H]
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MAKSKATQDADVIGHGGELHQQHTGRGKQDPEILTTNFGVPISDNQNSLRAGERGPTLLEDFVLREKIFHFDHERIPERI VHARGSGAHGVFKCTRAIPELTRANLFQQAGQETEVFVRFSTVAGGAGSVDTPRDVRGFAVKFYTREGNWDLVGNNIPVF FIQDAIKFPDLIHSVKMEADRGYPQAASAHDTFWDFASLMPESTHMLMWAMSDRAIPRSLRMMQGFGVHTFRFVNAKGEG RYVKFHWTPVLGVQSTCWDEAVKIAGADPDYHRRDLFEAIEAGDFPEWDLGIQVFDEAWAAQQPYDVLDATKLIPEEEIP VETIGRLTLNANVKNFFAETEQAAFLPSNVVPGIDFSNDPLLQGRLFSYLDTQKSRLGTTNFHQIPINAPRCPFHNMQRD GMMQTQVPAGRANYEPNSLAHAGEDGGPREAPAEGFTTFQANAERNDPAAKLRVRAELFADHYSQARLLFRSLEPIEQAH LASAFVFELSKVSLQHVRSRMVSRLRNVDESLAQRVADGLAIALPDAAPPAREPIDMKPSPALSIVANAKPTLRGRKVGI LFDEGSDKAAIEALVASIEKAGGRAMLIAPKVGGVPVQGGTLTAHGQLAGSPSVLVDAVALALTEDAARKLAQDAAALSF VLDAFAHLKAIGHTPGAQPLLERAGIQPDAGVTDLGEAFVKAAARRFYDREPKLRELA
Sequences:
>Translated_698_residues MAKSKATQDADVIGHGGELHQQHTGRGKQDPEILTTNFGVPISDNQNSLRAGERGPTLLEDFVLREKIFHFDHERIPERI VHARGSGAHGVFKCTRAIPELTRANLFQQAGQETEVFVRFSTVAGGAGSVDTPRDVRGFAVKFYTREGNWDLVGNNIPVF FIQDAIKFPDLIHSVKMEADRGYPQAASAHDTFWDFASLMPESTHMLMWAMSDRAIPRSLRMMQGFGVHTFRFVNAKGEG RYVKFHWTPVLGVQSTCWDEAVKIAGADPDYHRRDLFEAIEAGDFPEWDLGIQVFDEAWAAQQPYDVLDATKLIPEEEIP VETIGRLTLNANVKNFFAETEQAAFLPSNVVPGIDFSNDPLLQGRLFSYLDTQKSRLGTTNFHQIPINAPRCPFHNMQRD GMMQTQVPAGRANYEPNSLAHAGEDGGPREAPAEGFTTFQANAERNDPAAKLRVRAELFADHYSQARLLFRSLEPIEQAH LASAFVFELSKVSLQHVRSRMVSRLRNVDESLAQRVADGLAIALPDAAPPAREPIDMKPSPALSIVANAKPTLRGRKVGI LFDEGSDKAAIEALVASIEKAGGRAMLIAPKVGGVPVQGGTLTAHGQLAGSPSVLVDAVALALTEDAARKLAQDAAALSF VLDAFAHLKAIGHTPGAQPLLERAGIQPDAGVTDLGEAFVKAAARRFYDREPKLRELA >Mature_697_residues AKSKATQDADVIGHGGELHQQHTGRGKQDPEILTTNFGVPISDNQNSLRAGERGPTLLEDFVLREKIFHFDHERIPERIV HARGSGAHGVFKCTRAIPELTRANLFQQAGQETEVFVRFSTVAGGAGSVDTPRDVRGFAVKFYTREGNWDLVGNNIPVFF IQDAIKFPDLIHSVKMEADRGYPQAASAHDTFWDFASLMPESTHMLMWAMSDRAIPRSLRMMQGFGVHTFRFVNAKGEGR YVKFHWTPVLGVQSTCWDEAVKIAGADPDYHRRDLFEAIEAGDFPEWDLGIQVFDEAWAAQQPYDVLDATKLIPEEEIPV ETIGRLTLNANVKNFFAETEQAAFLPSNVVPGIDFSNDPLLQGRLFSYLDTQKSRLGTTNFHQIPINAPRCPFHNMQRDG MMQTQVPAGRANYEPNSLAHAGEDGGPREAPAEGFTTFQANAERNDPAAKLRVRAELFADHYSQARLLFRSLEPIEQAHL ASAFVFELSKVSLQHVRSRMVSRLRNVDESLAQRVADGLAIALPDAAPPAREPIDMKPSPALSIVANAKPTLRGRKVGIL FDEGSDKAAIEALVASIEKAGGRAMLIAPKVGGVPVQGGTLTAHGQLAGSPSVLVDAVALALTEDAARKLAQDAAALSFV LDAFAHLKAIGHTPGAQPLLERAGIQPDAGVTDLGEAFVKAAARRFYDREPKLRELA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions requ
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=422, Percent_Identity=47.1563981042654, Blast_Score=376, Evalue=1e-104, Organism=Escherichia coli, GI48994891, Length=682, Percent_Identity=50, Blast_Score=653, Evalue=0.0, Organism=Caenorhabditis elegans, GI25151141, Length=485, Percent_Identity=43.9175257731959, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI25147792, Length=482, Percent_Identity=43.7759336099585, Blast_Score=387, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71998444, Length=394, Percent_Identity=47.2081218274112, Blast_Score=379, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6320462, Length=492, Percent_Identity=39.4308943089431, Blast_Score=327, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6321525, Length=524, Percent_Identity=35.1145038167939, Blast_Score=299, Evalue=1e-81, Organism=Drosophila melanogaster, GI17981717, Length=405, Percent_Identity=45.9259259259259, Blast_Score=349, Evalue=3e-96, Organism=Drosophila melanogaster, GI19920968, Length=402, Percent_Identity=42.7860696517413, Blast_Score=341, Evalue=1e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 76420; Mature: 76289
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSKATQDADVIGHGGELHQQHTGRGKQDPEILTTNFGVPISDNQNSLRAGERGPTLLE CCCCCCCCCCHHCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHH DFVLREKIFHFDHERIPERIVHARGSGAHGVFKCTRAIPELTRANLFQQAGQETEVFVRF HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE STVAGGAGSVDTPRDVRGFAVKFYTREGNWDLVGNNIPVFFIQDAIKFPDLIHSVKMEAD EEECCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHC RGYPQAASAHDTFWDFASLMPESTHMLMWAMSDRAIPRSLRMMQGFGVHTFRFVNAKGEG CCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCC RYVKFHWTPVLGVQSTCWDEAVKIAGADPDYHRRDLFEAIEAGDFPEWDLGIQVFDEAWA CEEEEEECEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC AQQPYDVLDATKLIPEEEIPVETIGRLTLNANVKNFFAETEQAAFLPSNVVPGIDFSNDP CCCCHHHHHHHHCCCCCCCCHHHHCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC LLQGRLFSYLDTQKSRLGTTNFHQIPINAPRCPFHNMQRDGMMQTQVPAGRANYEPNSLA CHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC HAGEDGGPREAPAEGFTTFQANAERNDPAAKLRVRAELFADHYSQARLLFRSLEPIEQAH CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASAFVFELSKVSLQHVRSRMVSRLRNVDESLAQRVADGLAIALPDAAPPAREPIDMKPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCC PALSIVANAKPTLRGRKVGILFDEGSDKAAIEALVASIEKAGGRAMLIAPKVGGVPVQGG CCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCC TLTAHGQLAGSPSVLVDAVALALTEDAARKLAQDAAALSFVLDAFAHLKAIGHTPGAQPL EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LERAGIQPDAGVTDLGEAFVKAAARRFYDREPKLRELA HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCC >Mature Secondary Structure AKSKATQDADVIGHGGELHQQHTGRGKQDPEILTTNFGVPISDNQNSLRAGERGPTLLE CCCCCCCCCHHCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHH DFVLREKIFHFDHERIPERIVHARGSGAHGVFKCTRAIPELTRANLFQQAGQETEVFVRF HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE STVAGGAGSVDTPRDVRGFAVKFYTREGNWDLVGNNIPVFFIQDAIKFPDLIHSVKMEAD EEECCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHC RGYPQAASAHDTFWDFASLMPESTHMLMWAMSDRAIPRSLRMMQGFGVHTFRFVNAKGEG CCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCC RYVKFHWTPVLGVQSTCWDEAVKIAGADPDYHRRDLFEAIEAGDFPEWDLGIQVFDEAWA CEEEEEECEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC AQQPYDVLDATKLIPEEEIPVETIGRLTLNANVKNFFAETEQAAFLPSNVVPGIDFSNDP CCCCHHHHHHHHCCCCCCCCHHHHCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC LLQGRLFSYLDTQKSRLGTTNFHQIPINAPRCPFHNMQRDGMMQTQVPAGRANYEPNSLA CHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC HAGEDGGPREAPAEGFTTFQANAERNDPAAKLRVRAELFADHYSQARLLFRSLEPIEQAH CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASAFVFELSKVSLQHVRSRMVSRLRNVDESLAQRVADGLAIALPDAAPPAREPIDMKPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCC PALSIVANAKPTLRGRKVGILFDEGSDKAAIEALVASIEKAGGRAMLIAPKVGGVPVQGG CCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCC TLTAHGQLAGSPSVLVDAVALALTEDAARKLAQDAAALSFVLDAFAHLKAIGHTPGAQPL EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LERAGIQPDAGVTDLGEAFVKAAARRFYDREPKLRELA HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10198032; 11481431 [H]