Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025292
Identifier: 238025292
GI number: 238025292
Start: 2443230
End: 2443820
Strand: Reverse
Name: 238025292
Synonym: bglu_2g19660
Alternate gene names: NA
Gene position: 2443820-2443230 (Counterclockwise)
Preceding gene: 238025293
Following gene: 238025291
Centisome position: 86.44
GC content: 72.42
Gene sequence:
>591_bases ATGCCGTCTCCCTCCCGCCTGCTGTTTCTGCCCGGCGCATCGGGCGATACCGCGTTCTGGCAGCCGCTTGCGCAACGTCT CCAGCACGGCGCCGAGCGCGAGATCGTCGCGTATCCGGGCTTGGGTGCCGAGCCGCCCGATCCGTCGATCCGCAGCCTCG ACGAACTGCTCGACCGCGTGCTGGCGCGCCTCGACCGGCCCAGCGCGCTGATCGCCCAGTCGATGGGCGGCGTGCTGGCA CGCCCCGAACTCGTCACGCATCTGGTGCTCTGCGTGACCTCGGGCGGCATCGACGTCGAGGCGCTCGGCGCCGCCGATTG GCGTGCCGCGTTCCGGGCCGGCCATGCGTCGTTGCCCGAGTGGTTTCCCGCCTACCGCGGCGATCTGACGGGCCAACTGC CCGGCGTCATGCAGCCAACCTTGCTGATCTGGGGCGACCACGATCCGTTCAGCCCGCCCGCCATCGGCGAGCGGCTGCTC GGCCTGCTGCCCGACGCGCGCCTGCACGTGGTGCGCGGCGGGCGCCACGACCTCGCGAGCGTGCATGCGGCCGCACTCGC GCCGCTCGTCGAAGCGCATCTGCGGCACTGA
Upstream 100 bases:
>100_bases CCGTTTTCCCCGGCCGAAGCAGTCGATGCCCAGCGGCCATCGCCGGCCCCTGCACGCCGCGCCCAGGCCGTCTCGGCCAC TTCGTCAAGGAGCCTGCTTC
Downstream 100 bases:
>100_bases CGCGCCGCCGTCGGTTGCAGCGGGTCCGGTTATTGCGCCATCCACTGGCCGGCATGCATGCCCCCGCTGGATGCGTGCCG TACTTCACATCGGTCGGCGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; 2-Hydroxy-6-Ketonona-2 4-Dienedioic Acid Hydrolase; Hydrolase
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPSPSRLLFLPGASGDTAFWQPLAQRLQHGAEREIVAYPGLGAEPPDPSIRSLDELLDRVLARLDRPSALIAQSMGGVLA RPELVTHLVLCVTSGGIDVEALGAADWRAAFRAGHASLPEWFPAYRGDLTGQLPGVMQPTLLIWGDHDPFSPPAIGERLL GLLPDARLHVVRGGRHDLASVHAAALAPLVEAHLRH
Sequences:
>Translated_196_residues MPSPSRLLFLPGASGDTAFWQPLAQRLQHGAEREIVAYPGLGAEPPDPSIRSLDELLDRVLARLDRPSALIAQSMGGVLA RPELVTHLVLCVTSGGIDVEALGAADWRAAFRAGHASLPEWFPAYRGDLTGQLPGVMQPTLLIWGDHDPFSPPAIGERLL GLLPDARLHVVRGGRHDLASVHAAALAPLVEAHLRH >Mature_195_residues PSPSRLLFLPGASGDTAFWQPLAQRLQHGAEREIVAYPGLGAEPPDPSIRSLDELLDRVLARLDRPSALIAQSMGGVLAR PELVTHLVLCVTSGGIDVEALGAADWRAAFRAGHASLPEWFPAYRGDLTGQLPGVMQPTLLIWGDHDPFSPPAIGERLLG LLPDARLHVVRGGRHDLASVHAAALAPLVEAHLRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20984; Mature: 20853
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPSRLLFLPGASGDTAFWQPLAQRLQHGAEREIVAYPGLGAEPPDPSIRSLDELLDRV CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH LARLDRPSALIAQSMGGVLARPELVTHLVLCVTSGGIDVEALGAADWRAAFRAGHASLPE HHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCCCH WFPAYRGDLTGQLPGVMQPTLLIWGDHDPFSPPAIGERLLGLLPDARLHVVRGGRHDLAS HHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHH VHAAALAPLVEAHLRH HHHHHHHHHHHHHHCC >Mature Secondary Structure PSPSRLLFLPGASGDTAFWQPLAQRLQHGAEREIVAYPGLGAEPPDPSIRSLDELLDRV CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH LARLDRPSALIAQSMGGVLARPELVTHLVLCVTSGGIDVEALGAADWRAAFRAGHASLPE HHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCCCH WFPAYRGDLTGQLPGVMQPTLLIWGDHDPFSPPAIGERLLGLLPDARLHVVRGGRHDLAS HHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHH VHAAALAPLVEAHLRH HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA