Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025272
Identifier: 238025272
GI number: 238025272
Start: 2418346
End: 2419077
Strand: Reverse
Name: 238025272
Synonym: bglu_2g19440
Alternate gene names: NA
Gene position: 2419077-2418346 (Counterclockwise)
Preceding gene: 238025276
Following gene: 238025268
Centisome position: 85.56
GC content: 64.21
Gene sequence:
>732_bases ATGAATATCGAGGCGGCGCGCGAAGCCAATCCGGAGCTTGCCGAATCCGGCGAGCCAGGCATGCGTGCGCTCGACGACCC AACGATGCCTGCCCAGCCGTTCGCTGCTTTCGATACCGCGACGTGCGATACGGGCCTTGATGCCGCGCCGTTTCAGATAA CGTCGGCAGCGCGCAAAGTCATACGCTTTCTCAGCGTGCAGTTTGCTCGGCTGCTTGCACGGCTGATCAGTCAGGCCAGC GACGGCAGGGATGGCATCAAGCGCGGACTCGAGTGCCATCGAATCGTGCCGGTTGGCTCCCGTGATCGTGACAGCCAGCG GGATGCCACGCGCAGCTACGACGATGTGTCGTTTCGATCCGAGCTTGCCGCGGTCGGTCGGGTTGAGGCCGGTTTGCTGG CCCCCCGGGGGCTGGAGACGCTGGCGCCATCGAGGCTGGCGCGTTCCCAATCGATCTGGTCGTGCTCACGCCGCCGACGC AGTATCGCCAGATGCAGCCGATGCCATACACCGGCGGCTTGCCAGTCTCGCAGACGTCGCCAGCACCTCATGCCGCTGCC GAAACCCTGCTCTTGCGGGAGGTCTTCCCACGGGATGCCGGTTTGCAGCACATACAGGATGCCGTTGAGCGCAGCTCGGA TCAGAGTTCCACCGCCTGCGTTGCGTATCCCCGGCAATTGTCGGCCTATGCCGAACACGATATGCCGACGTATGGGTGAT GGGCGCGGGTGA
Upstream 100 bases:
>100_bases CTGCAGTTGTTGGAGCCGAGTGCAAACCAAGAACCGCTAACACAAATCATCCACAAATCATCGAGCAGATGATGGCGGCA GCCAGGATGAGCAAAGCGGG
Downstream 100 bases:
>100_bases AGCGTTGGGCGGGCCGGTCCCGACCTGCACGACATCGCGACGTGGCCGCGTCAGCCATGGCGGTCAGCGTGGTCGGCATA GGCTGGCGCAAGCGGTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MNIEAAREANPELAESGEPGMRALDDPTMPAQPFAAFDTATCDTGLDAAPFQITSAARKVIRFLSVQFARLLARLISQAS DGRDGIKRGLECHRIVPVGSRDRDSQRDATRSYDDVSFRSELAAVGRVEAGLLAPRGLETLAPSRLARSQSIWSCSRRRR SIARCSRCHTPAACQSRRRRQHLMPLPKPCSCGRSSHGMPVCSTYRMPLSAARIRVPPPALRIPGNCRPMPNTICRRMGD GRG
Sequences:
>Translated_243_residues MNIEAAREANPELAESGEPGMRALDDPTMPAQPFAAFDTATCDTGLDAAPFQITSAARKVIRFLSVQFARLLARLISQAS DGRDGIKRGLECHRIVPVGSRDRDSQRDATRSYDDVSFRSELAAVGRVEAGLLAPRGLETLAPSRLARSQSIWSCSRRRR SIARCSRCHTPAACQSRRRRQHLMPLPKPCSCGRSSHGMPVCSTYRMPLSAARIRVPPPALRIPGNCRPMPNTICRRMGD GRG >Mature_243_residues MNIEAAREANPELAESGEPGMRALDDPTMPAQPFAAFDTATCDTGLDAAPFQITSAARKVIRFLSVQFARLLARLISQAS DGRDGIKRGLECHRIVPVGSRDRDSQRDATRSYDDVSFRSELAAVGRVEAGLLAPRGLETLAPSRLARSQSIWSCSRRRR SIARCSRCHTPAACQSRRRRQHLMPLPKPCSCGRSSHGMPVCSTYRMPLSAARIRVPPPALRIPGNCRPMPNTICRRMGD GRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26651; Mature: 26651
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEAAREANPELAESGEPGMRALDDPTMPAQPFAAFDTATCDTGLDAAPFQITSAARKV CCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHH IRFLSVQFARLLARLISQASDGRDGIKRGLECHRIVPVGSRDRDSQRDATRSYDDVSFRS HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHH ELAAVGRVEAGLLAPRGLETLAPSRLARSQSIWSCSRRRRSIARCSRCHTPAACQSRRRR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QHLMPLPKPCSCGRSSHGMPVCSTYRMPLSAARIRVPPPALRIPGNCRPMPNTICRRMGD HHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCEEECCCCCCCCCCCCCCCCHHHHHHHCC GRG CCC >Mature Secondary Structure MNIEAAREANPELAESGEPGMRALDDPTMPAQPFAAFDTATCDTGLDAAPFQITSAARKV CCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHH IRFLSVQFARLLARLISQASDGRDGIKRGLECHRIVPVGSRDRDSQRDATRSYDDVSFRS HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHH ELAAVGRVEAGLLAPRGLETLAPSRLARSQSIWSCSRRRRSIARCSRCHTPAACQSRRRR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QHLMPLPKPCSCGRSSHGMPVCSTYRMPLSAARIRVPPPALRIPGNCRPMPNTICRRMGD HHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCEEECCCCCCCCCCCCCCCCHHHHHHHCC GRG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA