The gene/protein map for NC_012721 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is frc [H]

Identifier: 238025267

GI number: 238025267

Start: 2411577

End: 2412992

Strand: Reverse

Name: frc [H]

Synonym: bglu_2g19390

Alternate gene names: 238025267

Gene position: 2412992-2411577 (Counterclockwise)

Preceding gene: 238025268

Following gene: 238025266

Centisome position: 85.35

GC content: 72.95

Gene sequence:

>1416_bases
ATGTCTGAACTGAATTCGAACCCTGCCCTGGAGGAGACCTCCGTGGCCCGCACCCGGGCTTGCCTCGGCGAGATCTGGAG
CGCGCTGGGCGGCGCGCCGGACGGCCTGAGCGAGGTCGGTTTCAAGGGGCACGGCGTGCTGCCGTCGGCCTTTCACGTGA
CGGATTTCGCGTCGGCCAGCATCGCGGCGGCGGCTCACGCGGTTGCCGAACTGATCGGGCAGGCGCACGGCGCGCGGCCG
GCGGTGGAGGTCGATCGCCGCTACGCCTCGCTGTGGTTCCAGACCTCGCTGCGTCCGCAAGGCTGGCAGATGCCGCCGCA
GTGGGACGTGATCGCCGGTGATTATCGGACCGCCGACGGCTGGATTCGCCTGCATACCAATGCGCCGCATCATCGCGACG
CGGCGCTCGCGGTGCTGGGCACGCCGCTCGACAAGGACGCCGTGGCCCGCGAGGTGGCGCGCTGGAAGTCGGACGAGCTG
GAAAGCGCGGTGGTGTCGCAACACGGCTGCGCCGCGGCGCTGCACACCCAGGCCCAGTGGGCCGAGCATCCGCAGGGCCG
GGCCGTGCAGGCCGAGCCGCTGCTGATCCACGACGCGGTGGGGGCCGATGCGCCCCGGGCGCGCTGGCAGATTCCCGCCG
CCCGCCCGCTGCATGAGGTGCGGGTCCTCGACCTCACGCGCATTCTGGCGGGGCCGGTGGCCACGCGGTTTCTCGCCGGC
TATGGCGCCAATGTGCTGCGCATCGATCCGTTCGGCTGGGAAGAGCCCAACAATGTGCCGGAAGTGGTGCTGGGCAAGCG
TTGCGCGCGCCTCGACTTCAAGTCGCGGGACGGCCTCGCCATGCTGCGCCGGTTGATCGGCGAGGCCGACGTGCTGGTGC
ACGGCTACCGGCCCGGCGCGCTCGAGCGGCTCGGCCTCGATGCCGATGAACGGCGCCGCCTCAACCCGGGGCTGGTGGAC
GTGTCGCTCGACGCCTACGGATGGAGCGGCGCATGGCGCGACCGGCGCGGTTTCGACAGCCTGGTGCAGATCAGCACCGG
CATCGCGGCCACCGGCATGCGCGAGGCCGGCGCCGAGCGTCCGGTGCCGCTGCCCAGCCAGGCGCTCGATCACGGCACCG
GCTACCTGCTGGCCGCCGCCGCGGTGCGCGGCCTCACCCAGCGGCTGAGAACCGGGGCGGGCTCGCGGACTCGCGGCTCA
CTGGCGCGCACCGCGCTGCTGCTGACCTCGCAGGGCATCCAGGACCGGGCCCAGCCGCTGATCGCGCCGGAAACCGAGGC
CGATCTGGACGACTGGGTCGAGCACACGAGCTGGGGCGCGGCGCGCCGTGTGCGGGCGCCGGCGCAGGTGTTGGGCGCGG
CCATGCGCTGGGACCATCCCTCCTGCGACCTCGGCTCCTCGCCGGTGGCGTGGTAG

Upstream 100 bases:

>100_bases
TCTTGACGTCGTTGCCGCATGCCGGATGCGAGCCGGCACGGATGCGCAGGTAGCGCCGTGCCGCCGCTTCGGGCGCCCAC
TTTCATCGAGAAGACGATCC

Downstream 100 bases:

>100_bases
GGCGTGCGTTGCGATCGGCAGGCCTCAATCGCAGGCAGTAAACGGCAAACAGCAAAGGAGCAGGACCATGAGTGAGACGG
TGGTGGTGAGCGGTGGCGGT

Product: CAIB/BAIF family protein CoA transferase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MSELNSNPALEETSVARTRACLGEIWSALGGAPDGLSEVGFKGHGVLPSAFHVTDFASASIAAAAHAVAELIGQAHGARP
AVEVDRRYASLWFQTSLRPQGWQMPPQWDVIAGDYRTADGWIRLHTNAPHHRDAALAVLGTPLDKDAVAREVARWKSDEL
ESAVVSQHGCAAALHTQAQWAEHPQGRAVQAEPLLIHDAVGADAPRARWQIPAARPLHEVRVLDLTRILAGPVATRFLAG
YGANVLRIDPFGWEEPNNVPEVVLGKRCARLDFKSRDGLAMLRRLIGEADVLVHGYRPGALERLGLDADERRRLNPGLVD
VSLDAYGWSGAWRDRRGFDSLVQISTGIAATGMREAGAERPVPLPSQALDHGTGYLLAAAAVRGLTQRLRTGAGSRTRGS
LARTALLLTSQGIQDRAQPLIAPETEADLDDWVEHTSWGAARRVRAPAQVLGAAMRWDHPSCDLGSSPVAW

Sequences:

>Translated_471_residues
MSELNSNPALEETSVARTRACLGEIWSALGGAPDGLSEVGFKGHGVLPSAFHVTDFASASIAAAAHAVAELIGQAHGARP
AVEVDRRYASLWFQTSLRPQGWQMPPQWDVIAGDYRTADGWIRLHTNAPHHRDAALAVLGTPLDKDAVAREVARWKSDEL
ESAVVSQHGCAAALHTQAQWAEHPQGRAVQAEPLLIHDAVGADAPRARWQIPAARPLHEVRVLDLTRILAGPVATRFLAG
YGANVLRIDPFGWEEPNNVPEVVLGKRCARLDFKSRDGLAMLRRLIGEADVLVHGYRPGALERLGLDADERRRLNPGLVD
VSLDAYGWSGAWRDRRGFDSLVQISTGIAATGMREAGAERPVPLPSQALDHGTGYLLAAAAVRGLTQRLRTGAGSRTRGS
LARTALLLTSQGIQDRAQPLIAPETEADLDDWVEHTSWGAARRVRAPAQVLGAAMRWDHPSCDLGSSPVAW
>Mature_470_residues
SELNSNPALEETSVARTRACLGEIWSALGGAPDGLSEVGFKGHGVLPSAFHVTDFASASIAAAAHAVAELIGQAHGARPA
VEVDRRYASLWFQTSLRPQGWQMPPQWDVIAGDYRTADGWIRLHTNAPHHRDAALAVLGTPLDKDAVAREVARWKSDELE
SAVVSQHGCAAALHTQAQWAEHPQGRAVQAEPLLIHDAVGADAPRARWQIPAARPLHEVRVLDLTRILAGPVATRFLAGY
GANVLRIDPFGWEEPNNVPEVVLGKRCARLDFKSRDGLAMLRRLIGEADVLVHGYRPGALERLGLDADERRRLNPGLVDV
SLDAYGWSGAWRDRRGFDSLVQISTGIAATGMREAGAERPVPLPSQALDHGTGYLLAAAAVRGLTQRLRTGAGSRTRGSL
ARTALLLTSQGIQDRAQPLIAPETEADLDDWVEHTSWGAARRVRAPAQVLGAAMRWDHPSCDLGSSPVAW

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863124, Length=204, Percent_Identity=29.9019607843137, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI300863128, Length=204, Percent_Identity=29.9019607843137, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI300863126, Length=310, Percent_Identity=25.4838709677419, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI266456254, Length=194, Percent_Identity=31.4432989690722, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI42794625, Length=194, Percent_Identity=31.4432989690722, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI266458393, Length=194, Percent_Identity=30.9278350515464, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI266458397, Length=194, Percent_Identity=30.9278350515464, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI266458395, Length=123, Percent_Identity=35.7723577235772, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI42822893, Length=116, Percent_Identity=36.2068965517241, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1788717, Length=218, Percent_Identity=27.5229357798165, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082093, Length=212, Percent_Identity=25.4716981132075, Blast_Score=83, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI32564160, Length=168, Percent_Identity=29.7619047619048, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24648431, Length=197, Percent_Identity=35.5329949238579, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24585488, Length=197, Percent_Identity=30.4568527918782, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 50789; Mature: 50658

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELNSNPALEETSVARTRACLGEIWSALGGAPDGLSEVGFKGHGVLPSAFHVTDFASAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH
IAAAAHAVAELIGQAHGARPAVEVDRRYASLWFQTSLRPQGWQMPPQWDVIAGDYRTADG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEECCC
WIRLHTNAPHHRDAALAVLGTPLDKDAVAREVARWKSDELESAVVSQHGCAAALHTQAQW
EEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH
AEHPQGRAVQAEPLLIHDAVGADAPRARWQIPAARPLHEVRVLDLTRILAGPVATRFLAG
HCCCCCCCEECCCEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YGANVLRIDPFGWEEPNNVPEVVLGKRCARLDFKSRDGLAMLRRLIGEADVLVHGYRPGA
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCH
LERLGLDADERRRLNPGLVDVSLDAYGWSGAWRDRRGFDSLVQISTGIAATGMREAGAER
HHHHCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCHHHCCHHHCCCCC
PVPLPSQALDHGTGYLLAAAAVRGLTQRLRTGAGSRTRGSLARTALLLTSQGIQDRAQPL
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCC
IAPETEADLDDWVEHTSWGAARRVRAPAQVLGAAMRWDHPSCDLGSSPVAW
CCCCCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SELNSNPALEETSVARTRACLGEIWSALGGAPDGLSEVGFKGHGVLPSAFHVTDFASAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH
IAAAAHAVAELIGQAHGARPAVEVDRRYASLWFQTSLRPQGWQMPPQWDVIAGDYRTADG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEECCC
WIRLHTNAPHHRDAALAVLGTPLDKDAVAREVARWKSDELESAVVSQHGCAAALHTQAQW
EEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH
AEHPQGRAVQAEPLLIHDAVGADAPRARWQIPAARPLHEVRVLDLTRILAGPVATRFLAG
HCCCCCCCEECCCEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YGANVLRIDPFGWEEPNNVPEVVLGKRCARLDFKSRDGLAMLRRLIGEADVLVHGYRPGA
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCH
LERLGLDADERRRLNPGLVDVSLDAYGWSGAWRDRRGFDSLVQISTGIAATGMREAGAER
HHHHCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCHHHCCHHHCCCCC
PVPLPSQALDHGTGYLLAAAAVRGLTQRLRTGAGSRTRGSLARTALLLTSQGIQDRAQPL
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCC
IAPETEADLDDWVEHTSWGAARRVRAPAQVLGAAMRWDHPSCDLGSSPVAW
CCCCCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA