BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession	NC_012721
Length	2,827,333

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The map label for this gene is fabG [H]

Identifier: 238025266

GI number: 238025266

Start: 2410739

End: 2411509

Strand: Reverse

Name: fabG [H]

Synonym: bglu_2g19380

Alternate gene names: 238025266

Gene position: 2411509-2410739 (Counterclockwise)

Preceding gene: 238025267

Following gene: 238025265

Centisome position: 85.29

GC content: 71.98

Gene sequence:

>771_bases
ATGAGTGAGACGGTGGTGGTGAGCGGTGGCGGTACCGGAATCGGCCTGGCAGCGGCGCGTTACTTCGCGCGTCGCGGCGC
CCAGGTGGTGATCGTGGGCCGTCGCGAGACGGTGCTGGCGCGCGCCGTGGACGAGATCGCGCAGGCCGCGCCCGGCGCGC
CGCGCGTGCTGCCGCTGCGGGCCGACCTGTCGGAGCCCGCGCAGGTGGAGAGCTTGCGCGACGCACTGGTCGAACGGTTC
CGCACGGTCGACGTGCTGGTCAACGCGGCTGGCGGGCACGTGCTGCGGCAGCGGCCCGCCAGCGATTACGCGGACGGGCT
GGCCGGGGTGGCCCGGCGCTGGACCGACAACCTGCGGATGAACACGCTGTCCGCGGTGCTGTTGACCGAGGCCCTGGTGC
CGCATCTGTCGAAGCCGGGCGGCCGCATCGTGCTGGTCAGCTCGATCGCCGCGTTCCGCGGTTCGGGGCAGGGCTGCTAT
GGCGCCTCGAAGGCGGCGCTGCACCCGTATTGCGCCGATCTCGCGAAAGCCCTGGGGCCGAAGGGCGTGACGGTGAATAC
CGTGGCGCCGGGCTTCGTGGTCGATACCGAGTTCTTCGGCGGCGCGCTCAACGAGCGCCAGCGCCAGGACAAGATCGCCG
AAGCGGTGAACGGCCGTGCCGGCACGCCCGACGACATCGCCAACACGATCGGCTGGCTCGCCTCGCCGGAAGCGCTGCAC
ATCACCGGACAGGTGATTCACGTCAACGGCGGGGCCGAGCGCGCCCGCTGA

Upstream 100 bases:

>100_bases
TGCGACCTCGGCTCCTCGCCGGTGGCGTGGTAGGGCGTGCGTTGCGATCGGCAGGCCTCAATCGCAGGCAGTAAACGGCA
AACAGCAAAGGAGCAGGACC

Downstream 100 bases:

>100_bases
TCGCGGCTTCACCCCGGGCACCGGCGCGCCTCGCCGGTGCCCACTTCTCCTATTGCCCATGAACTCATCGAATGCGGAAA
ATATCGGCGATGCGGTATCG

Product: putative 3-oxacyl-ACP reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSETVVVSGGGTGIGLAAARYFARRGAQVVIVGRRETVLARAVDEIAQAAPGAPRVLPLRADLSEPAQVESLRDALVERF
RTVDVLVNAAGGHVLRQRPASDYADGLAGVARRWTDNLRMNTLSAVLLTEALVPHLSKPGGRIVLVSSIAAFRGSGQGCY
GASKAALHPYCADLAKALGPKGVTVNTVAPGFVVDTEFFGGALNERQRQDKIAEAVNGRAGTPDDIANTIGWLASPEALH
ITGQVIHVNGGAERAR

Sequences:

>Translated_256_residues
MSETVVVSGGGTGIGLAAARYFARRGAQVVIVGRRETVLARAVDEIAQAAPGAPRVLPLRADLSEPAQVESLRDALVERF
RTVDVLVNAAGGHVLRQRPASDYADGLAGVARRWTDNLRMNTLSAVLLTEALVPHLSKPGGRIVLVSSIAAFRGSGQGCY
GASKAALHPYCADLAKALGPKGVTVNTVAPGFVVDTEFFGGALNERQRQDKIAEAVNGRAGTPDDIANTIGWLASPEALH
ITGQVIHVNGGAERAR
>Mature_255_residues
SETVVVSGGGTGIGLAAARYFARRGAQVVIVGRRETVLARAVDEIAQAAPGAPRVLPLRADLSEPAQVESLRDALVERFR
TVDVLVNAAGGHVLRQRPASDYADGLAGVARRWTDNLRMNTLSAVLLTEALVPHLSKPGGRIVLVSSIAAFRGSGQGCYG
ASKAALHPYCADLAKALGPKGVTVNTVAPGFVVDTEFFGGALNERQRQDKIAEAVNGRAGTPDDIANTIGWLASPEALHI
TGQVIHVNGGAERAR

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=32.8063241106719, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=30.3149606299213, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=27.6264591439689, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=30.3149606299213, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI40254992, Length=261, Percent_Identity=32.183908045977, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI59889578, Length=240, Percent_Identity=31.6666666666667, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI33667109, Length=216, Percent_Identity=31.9444444444444, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=25.296442687747, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI66933014, Length=239, Percent_Identity=28.4518828451883, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI15277342, Length=267, Percent_Identity=28.8389513108614, Blast_Score=68, Evalue=8e-12,
Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=34.2741935483871, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787905, Length=253, Percent_Identity=29.6442687747036, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=26.5873015873016, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=32.9365079365079, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786812, Length=261, Percent_Identity=32.5670498084291, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI2367175, Length=253, Percent_Identity=29.6442687747036, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI2367365, Length=255, Percent_Identity=29.8039215686275, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787820, Length=236, Percent_Identity=27.5423728813559, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082160, Length=263, Percent_Identity=25.8555133079848, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87082100, Length=260, Percent_Identity=26.1538461538462, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790717, Length=262, Percent_Identity=22.1374045801527, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=32.5757575757576, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=32.046332046332, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17538480, Length=258, Percent_Identity=31.7829457364341, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=30.3149606299213, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=30.9803921568627, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=30.0751879699248, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=31.9230769230769, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=32.4427480916031, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17551412, Length=258, Percent_Identity=30.2325581395349, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=260, Percent_Identity=29.6153846153846, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=30.8880308880309, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=33.969465648855, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=31.0077519379845, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=254, Percent_Identity=30.3149606299213, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=28.6792452830189, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=33.9622641509434, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=32.5842696629214, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=31.9548872180451, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=30.2681992337165, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=32.6923076923077, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=259, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17555706, Length=256, Percent_Identity=29.296875, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=259, Percent_Identity=28.1853281853282, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17536651, Length=259, Percent_Identity=28.957528957529, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=262, Percent_Identity=26.7175572519084, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=252, Percent_Identity=30.5555555555556, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=247, Percent_Identity=28.3400809716599, Blast_Score=86, Evalue=5e-18,
Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=36.078431372549, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI23397609, Length=259, Percent_Identity=32.4324324324324, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=31.0756972111554, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=32.9411764705882, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=31.4741035856574, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=28.740157480315, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24643142, Length=250, Percent_Identity=28.4, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358495, Length=235, Percent_Identity=28.0851063829787, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24644337, Length=242, Percent_Identity=29.7520661157025, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26715; Mature: 26584

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETVVVSGGGTGIGLAAARYFARRGAQVVIVGRRETVLARAVDEIAQAAPGAPRVLPLR
CCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEC
ADLSEPAQVESLRDALVERFRTVDVLVNAAGGHVLRQRPASDYADGLAGVARRWTDNLRM
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHH
NTLSAVLLTEALVPHLSKPGGRIVLVSSIAAFRGSGQGCYGASKAALHPYCADLAKALGP
HHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHCC
KGVTVNTVAPGFVVDTEFFGGALNERQRQDKIAEAVNGRAGTPDDIANTIGWLASPEALH
CCCEEEECCCCEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEE
ITGQVIHVNGGAERAR
EEEEEEEECCCCCCCC
>Mature Secondary Structure 
SETVVVSGGGTGIGLAAARYFARRGAQVVIVGRRETVLARAVDEIAQAAPGAPRVLPLR
CCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEC
ADLSEPAQVESLRDALVERFRTVDVLVNAAGGHVLRQRPASDYADGLAGVARRWTDNLRM
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHH
NTLSAVLLTEALVPHLSKPGGRIVLVSSIAAFRGSGQGCYGASKAALHPYCADLAKALGP
HHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHCC
KGVTVNTVAPGFVVDTEFFGGALNERQRQDKIAEAVNGRAGTPDDIANTIGWLASPEALH
CCCEEEECCCCEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEE
ITGQVIHVNGGAERAR
EEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]