Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025259
Identifier: 238025259
GI number: 238025259
Start: 2403260
End: 2404003
Strand: Reverse
Name: 238025259
Synonym: bglu_2g19310
Alternate gene names: NA
Gene position: 2404003-2403260 (Counterclockwise)
Preceding gene: 238025260
Following gene: 238025258
Centisome position: 85.03
GC content: 71.91
Gene sequence:
>744_bases ATGGTCGGAAAACTGCTGGTGCGCGGGATGCTCGCAGGCATCGCCGCCGGTCTGCTCACGTTCGGTTTCGCCCGCATCGC CGGCGAGCCGCAGGTCGATCAGGCGATCGGGTTCGAGCAGAAGCTCGATGCGGCCAGGGGCGAGGCGCCCGAGCCCGAAC TCGTCGGCCGCCCGACGCAGGCCGGCCTCGGCCTCGGCACCGGCGTGGTGGTATATGGCGCCGCGCTCGGCGGGCTGTTC GCGCTGACCTTCGCATTCGCCTACGGCCGCATCGGCAGCACGCGGCCGCGCACCTTGTCGGCCTGCCTGGCGCTGGCCGC CTACGTCGCGCTGGTGATCGTGCCGAGCCTGAAGTATCCGGCGAACCCGCCCTCGGTCGGCGATCCCGAGACGATCGGCT ATCGTACCGGGCTGTTCTTCTTGATGATCGCGATCTCGATCGCGGTCTCGGTGTTCTCGCTGAACCTGCGCCGCGCGCTG GCCGCCCGCCTGGGCCAGTGGAACGCGTCGATCGCGGCCGGGCTGGTGTTCCTCGCGATCATCACGGCCGTGCAGCTCGC GCTGCCGGCCATCGACGAGGTGCCGGCCGCGTTCCCGGCCGTGGTGCTCTGGAAATTCCGCGTTGCCGCGCTCGGCATGC AGGCGATCCTCTGGGCCACGATCGGGCTGCTGTTCGGCGCGCTGGTCGAACGCGGCGGCCTGATGCCGGCCCCGCGTCGC GGCGGCCCGGCCGCGGCGCGCTGA
Upstream 100 bases:
>100_bases GAAGGCGCGACCTCGCTCGTGCCGGGCATGCTCGTCCACGAGTTCGTCCACGACGCGCGCCATCTGCTCGGCTTCCCCTG CCACTGACCGGGAGCGCGCG
Downstream 100 bases:
>100_bases GCGTCCGCGCGTTCGCGATACGGCGGCGGCACGACGGCCACTTCGGTGGCCGTTCGCCTTTATACTGAATCCGCCCTGTT GCTTCGCGAGGCTCCCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MVGKLLVRGMLAGIAAGLLTFGFARIAGEPQVDQAIGFEQKLDAARGEAPEPELVGRPTQAGLGLGTGVVVYGAALGGLF ALTFAFAYGRIGSTRPRTLSACLALAAYVALVIVPSLKYPANPPSVGDPETIGYRTGLFFLMIAISIAVSVFSLNLRRAL AARLGQWNASIAAGLVFLAIITAVQLALPAIDEVPAAFPAVVLWKFRVAALGMQAILWATIGLLFGALVERGGLMPAPRR GGPAAAR
Sequences:
>Translated_247_residues MVGKLLVRGMLAGIAAGLLTFGFARIAGEPQVDQAIGFEQKLDAARGEAPEPELVGRPTQAGLGLGTGVVVYGAALGGLF ALTFAFAYGRIGSTRPRTLSACLALAAYVALVIVPSLKYPANPPSVGDPETIGYRTGLFFLMIAISIAVSVFSLNLRRAL AARLGQWNASIAAGLVFLAIITAVQLALPAIDEVPAAFPAVVLWKFRVAALGMQAILWATIGLLFGALVERGGLMPAPRR GGPAAAR >Mature_247_residues MVGKLLVRGMLAGIAAGLLTFGFARIAGEPQVDQAIGFEQKLDAARGEAPEPELVGRPTQAGLGLGTGVVVYGAALGGLF ALTFAFAYGRIGSTRPRTLSACLALAAYVALVIVPSLKYPANPPSVGDPETIGYRTGLFFLMIAISIAVSVFSLNLRRAL AARLGQWNASIAAGLVFLAIITAVQLALPAIDEVPAAFPAVVLWKFRVAALGMQAILWATIGLLFGALVERGGLMPAPRR GGPAAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25509; Mature: 25509
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGKLLVRGMLAGIAAGLLTFGFARIAGEPQVDQAIGFEQKLDAARGEAPEPELVGRPTQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHCCCCCCCHHCCCCCC AGLGLGTGVVVYGAALGGLFALTFAFAYGRIGSTRPRTLSACLALAAYVALVIVPSLKYP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC ANPPSVGDPETIGYRTGLFFLMIAISIAVSVFSLNLRRALAARLGQWNASIAAGLVFLAI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ITAVQLALPAIDEVPAAFPAVVLWKFRVAALGMQAILWATIGLLFGALVERGGLMPAPRR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGPAAAR CCCCCCC >Mature Secondary Structure MVGKLLVRGMLAGIAAGLLTFGFARIAGEPQVDQAIGFEQKLDAARGEAPEPELVGRPTQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHCCCCCCCHHCCCCCC AGLGLGTGVVVYGAALGGLFALTFAFAYGRIGSTRPRTLSACLALAAYVALVIVPSLKYP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC ANPPSVGDPETIGYRTGLFFLMIAISIAVSVFSLNLRRALAARLGQWNASIAAGLVFLAI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ITAVQLALPAIDEVPAAFPAVVLWKFRVAALGMQAILWATIGLLFGALVERGGLMPAPRR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGPAAAR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA