Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025258
Identifier: 238025258
GI number: 238025258
Start: 2402517
End: 2403158
Strand: Reverse
Name: 238025258
Synonym: bglu_2g19300
Alternate gene names: NA
Gene position: 2403158-2402517 (Counterclockwise)
Preceding gene: 238025259
Following gene: 238025257
Centisome position: 85.0
GC content: 69.94
Gene sequence:
>642_bases GTGAAAATCCGCGCTGCCTTCGTTGCCGAGCTCGCCGTCAATTTCGTGCTGCCCTGGGTCGTCTATCGGCTCTCGCTGCC CTACTGGGGTGAGACGGGCGCCTTGTACGCCTCGGCGGTGCCGCCGCTCGCATGGGGCATCGTCGAGTTCGCGAAGACAC GGCGCGTGGACGCGCTTTCCGCGATCGCGCTGCTCGGCATCACGCTGTCGATCGCGATGCTGGCGATGGGCGGCAGCCCG CGGCTGCTGCTGATCCGCGAGTCGTTCGTGTCGGGCACGATCGGCATCGTGTTTCTGGTGTCGCTGCTGTTCCGGCGGCC GATCACCTACTACCTGACGCGCGCCACCATGGCGCGCGAAGGCGAGGGCGGAGGCGAGGGCGGCGTCGCGCGCTTCGAGA CGCTGTGGAGCGAGAGCGCCGCGGTGCGTGCCGCGCTGCGCCTCATCACGCTCGCCTGGGGCGTCGGCCTCGTGATCGAG TGCGCGCTGCGCAGCTGGTGCGCCTGGGCCTGGCCGATCGAGCGCACGCTCGTGATCACGCCGATCCTCAGCTACGCGAT CTTCGGCGGGCTGCTGTGCTGGACCTTCTGGTTCCGCAAGCGCATGCGCGGCCGCGTGGCCGTGGGCGAGGCCACGCTCT GA
Upstream 100 bases:
>100_bases CGTCCGCGCGTTCGCGATACGGCGGCGGCACGACGGCCACTTCGGTGGCCGTTCGCCTTTATACTGAATCCGCCCTGTTG CTTCGCGAGGCTCCCTGTCC
Downstream 100 bases:
>100_bases GTTCGTCGGCGGCCCGCATCGGGCCGCTGTCCTTTGGCGCGTTCCCCTGCCTCGCGTTTCCCTGCCTCGCGTTCGCGGCT CGAGTCAGCCGCTCGTCCGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKIRAAFVAELAVNFVLPWVVYRLSLPYWGETGALYASAVPPLAWGIVEFAKTRRVDALSAIALLGITLSIAMLAMGGSP RLLLIRESFVSGTIGIVFLVSLLFRRPITYYLTRATMAREGEGGGEGGVARFETLWSESAAVRAALRLITLAWGVGLVIE CALRSWCAWAWPIERTLVITPILSYAIFGGLLCWTFWFRKRMRGRVAVGEATL
Sequences:
>Translated_213_residues MKIRAAFVAELAVNFVLPWVVYRLSLPYWGETGALYASAVPPLAWGIVEFAKTRRVDALSAIALLGITLSIAMLAMGGSP RLLLIRESFVSGTIGIVFLVSLLFRRPITYYLTRATMAREGEGGGEGGVARFETLWSESAAVRAALRLITLAWGVGLVIE CALRSWCAWAWPIERTLVITPILSYAIFGGLLCWTFWFRKRMRGRVAVGEATL >Mature_213_residues MKIRAAFVAELAVNFVLPWVVYRLSLPYWGETGALYASAVPPLAWGIVEFAKTRRVDALSAIALLGITLSIAMLAMGGSP RLLLIRESFVSGTIGIVFLVSLLFRRPITYYLTRATMAREGEGGGEGGVARFETLWSESAAVRAALRLITLAWGVGLVIE CALRSWCAWAWPIERTLVITPILSYAIFGGLLCWTFWFRKRMRGRVAVGEATL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23458; Mature: 23458
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRAAFVAELAVNFVLPWVVYRLSLPYWGETGALYASAVPPLAWGIVEFAKTRRVDALS CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH AIALLGITLSIAMLAMGGSPRLLLIRESFVSGTIGIVFLVSLLFRRPITYYLTRATMARE HHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC GEGGGEGGVARFETLWSESAAVRAALRLITLAWGVGLVIECALRSWCAWAWPIERTLVIT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH PILSYAIFGGLLCWTFWFRKRMRGRVAVGEATL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKIRAAFVAELAVNFVLPWVVYRLSLPYWGETGALYASAVPPLAWGIVEFAKTRRVDALS CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH AIALLGITLSIAMLAMGGSPRLLLIRESFVSGTIGIVFLVSLLFRRPITYYLTRATMARE HHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC GEGGGEGGVARFETLWSESAAVRAALRLITLAWGVGLVIECALRSWCAWAWPIERTLVIT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH PILSYAIFGGLLCWTFWFRKRMRGRVAVGEATL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA