Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is pcaK [H]
Identifier: 238025257
GI number: 238025257
Start: 2400827
End: 2402185
Strand: Reverse
Name: pcaK [H]
Synonym: bglu_2g19290
Alternate gene names: 238025257
Gene position: 2402185-2400827 (Counterclockwise)
Preceding gene: 238025258
Following gene: 238025253
Centisome position: 84.96
GC content: 70.42
Gene sequence:
>1359_bases ATGAATCGCAGCCCCATCGTGAACGTGCAGACGTTCATCAATGAACAGCCGTTCGGCGCGTTCCAATGGCTGATCTTCCT GATGTGCTTCGTGATCGTGCTGCTCGACGGCTTCGACACGGCGGCGATCGGCTTCATCGCGCCGTCGCTGCTTTCCGAAT GGCATCTGACCAAGCCCGATCTGGCGCCGGTGCTCAGCGCGGCGCTGTTCGGGCTGGCCTGCGGCGCGCTCGTTTCCGGC CCGCTGTCGGACCGGCTCGGGCGGCGCGCGCTGTTGATCGGCTCGGTGCTGTTGTTCGGCGTGGCGTGCCTGGCCTCGGC GTTCGCGTCGAGCATCGGCACGCTGACGACGCTGCGCTTCGTGACGGGCGTGGGCCTCGGCGCCGCGATGCCGAACGCGG TCACGATGATGGGCGAGTTCTGCCCGGATAGGCGCCGCGCCACGCTGATCAACCTGATGTTTTGCGGCTTTCCGCTCGGC GCCGCGTTCGGCGGCTTCCTGGCCGCCTGGATGATTCCGCAGTTCGGCTGGCGCAGCGTGCTGCTGGCGGGCGGCGTCGC GCCGCTCGTGCTGGCCGTGGCGCTCGTCGCGCGGATGCCGGAATCGGTGCGCTTCATGGTGGCCACGCGCCGGCCCGTCG AGCGGATTCGCGCGACGCTCGCGCGCGTGTCGGCACGCGCGCGCGAGGCCGGCTCGTTCGTGCTGACGGAGACGGTGCCG CGCACCGAGGGTAAGGGCGCGGCGGTGGTGCTGTCGCGCCCGTACCGGGTGGGCTCGGTGATGCTGTGGATCGCCTATTT CATGGGCCTGGTGATCTTCTACGCCTCGATCAACTGGATGCCGATCCTGCTCAAGGACGCGGGGCTCGCTCCGAAGGCGG CCACGCTGATCTCGGCGCTATTCCCGCTCGGCGGCGTGGGCGCGGTGCTCAGCGGCGCGCTGATGGATCGCTTCAACGCG AACCGCGTGGTGGCCGTCTGCTATGCGCTGACGGCGGTGAGCGTCTACGCGATCGGGCAGGCGGCCGGCAACGTCGGCGC GCTGGTGGTGGTGGTGTTCCTGGCCGGCGTGCTGATGAACACGGCGCAGTCGTCGCTGCCGGCGCTGGCCGCCGCGTTCT ATCCCACCTCGGGGCGCGGCACCGGGGTGGCCTGGATGCTCGGCATCGGCCGCTTCGGCGGGATCGCGGGCTCGTTCCTG GTGGCCGAACTGACGGCCCGGCACGTGTCGTTCTCGGGCGTGTTCGCCACCATCGCGGTGGCGGGCCTGGTGTCGTGCGC GGCGCTGCTGGTCAAGCAGGGCGTGCGGCCGCAGCAGGCGGCGCAAGGCGGCGAGCAGGCGGAGTCACTCGGCCATTGA
Upstream 100 bases:
>100_bases TGTTCTGATCCGGAACCGAAGTTCGAGATACGAATTTCGCTCCGCCGAATCCGAATCGAAGCAGCGGCGCGATCCACCCG CGCGGCGCAGGAGACCCGCG
Downstream 100 bases:
>100_bases GCCGCGGCGCGGCCGGCCTCAGGCGTCCGCCGCCGGCTTCGGCGTGGGCGCCGGCTTGGGCGCGTGGCGCGCCAGGAAGC GGTCGAACTGCGAGGCGAAC
Product: major facilitator superfamily transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MNRSPIVNVQTFINEQPFGAFQWLIFLMCFVIVLLDGFDTAAIGFIAPSLLSEWHLTKPDLAPVLSAALFGLACGALVSG PLSDRLGRRALLIGSVLLFGVACLASAFASSIGTLTTLRFVTGVGLGAAMPNAVTMMGEFCPDRRRATLINLMFCGFPLG AAFGGFLAAWMIPQFGWRSVLLAGGVAPLVLAVALVARMPESVRFMVATRRPVERIRATLARVSARAREAGSFVLTETVP RTEGKGAAVVLSRPYRVGSVMLWIAYFMGLVIFYASINWMPILLKDAGLAPKAATLISALFPLGGVGAVLSGALMDRFNA NRVVAVCYALTAVSVYAIGQAAGNVGALVVVVFLAGVLMNTAQSSLPALAAAFYPTSGRGTGVAWMLGIGRFGGIAGSFL VAELTARHVSFSGVFATIAVAGLVSCAALLVKQGVRPQQAAQGGEQAESLGH
Sequences:
>Translated_452_residues MNRSPIVNVQTFINEQPFGAFQWLIFLMCFVIVLLDGFDTAAIGFIAPSLLSEWHLTKPDLAPVLSAALFGLACGALVSG PLSDRLGRRALLIGSVLLFGVACLASAFASSIGTLTTLRFVTGVGLGAAMPNAVTMMGEFCPDRRRATLINLMFCGFPLG AAFGGFLAAWMIPQFGWRSVLLAGGVAPLVLAVALVARMPESVRFMVATRRPVERIRATLARVSARAREAGSFVLTETVP RTEGKGAAVVLSRPYRVGSVMLWIAYFMGLVIFYASINWMPILLKDAGLAPKAATLISALFPLGGVGAVLSGALMDRFNA NRVVAVCYALTAVSVYAIGQAAGNVGALVVVVFLAGVLMNTAQSSLPALAAAFYPTSGRGTGVAWMLGIGRFGGIAGSFL VAELTARHVSFSGVFATIAVAGLVSCAALLVKQGVRPQQAAQGGEQAESLGH >Mature_452_residues MNRSPIVNVQTFINEQPFGAFQWLIFLMCFVIVLLDGFDTAAIGFIAPSLLSEWHLTKPDLAPVLSAALFGLACGALVSG PLSDRLGRRALLIGSVLLFGVACLASAFASSIGTLTTLRFVTGVGLGAAMPNAVTMMGEFCPDRRRATLINLMFCGFPLG AAFGGFLAAWMIPQFGWRSVLLAGGVAPLVLAVALVARMPESVRFMVATRRPVERIRATLARVSARAREAGSFVLTETVP RTEGKGAAVVLSRPYRVGSVMLWIAYFMGLVIFYASINWMPILLKDAGLAPKAATLISALFPLGGVGAVLSGALMDRFNA NRVVAVCYALTAVSVYAIGQAAGNVGALVVVVFLAGVLMNTAQSSLPALAAAFYPTSGRGTGVAWMLGIGRFGGIAGSFL VAELTARHVSFSGVFATIAVAGLVSCAALLVKQGVRPQQAAQGGEQAESLGH
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=471, Percent_Identity=24.6284501061571, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI7662270, Length=323, Percent_Identity=20.4334365325077, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI216548223, Length=254, Percent_Identity=23.2283464566929, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI213021148, Length=262, Percent_Identity=26.7175572519084, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI166064021, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI8923870, Length=417, Percent_Identity=24.7002398081535, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI87081723, Length=415, Percent_Identity=33.2530120481928, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI87082231, Length=461, Percent_Identity=26.8980477223427, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1789207, Length=277, Percent_Identity=29.2418772563177, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788074, Length=363, Percent_Identity=26.7217630853994, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786229, Length=182, Percent_Identity=28.021978021978, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082159, Length=311, Percent_Identity=27.0096463022508, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789312, Length=214, Percent_Identity=30.8411214953271, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788068, Length=445, Percent_Identity=23.8202247191011, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI32564663, Length=469, Percent_Identity=24.0938166311301, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71980582, Length=341, Percent_Identity=21.9941348973607, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71980584, Length=341, Percent_Identity=21.9941348973607, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI19922874, Length=276, Percent_Identity=27.1739130434783, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24640198, Length=224, Percent_Identity=25.8928571428571, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640196, Length=224, Percent_Identity=25.8928571428571, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640200, Length=224, Percent_Identity=25.8928571428571, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24658696, Length=173, Percent_Identity=28.3236994219653, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47148; Mature: 47148
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSPIVNVQTFINEQPFGAFQWLIFLMCFVIVLLDGFDTAAIGFIAPSLLSEWHLTKPD CCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC LAPVLSAALFGLACGALVSGPLSDRLGRRALLIGSVLLFGVACLASAFASSIGTLTTLRF HHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTGVGLGAAMPNAVTMMGEFCPDRRRATLINLMFCGFPLGAAFGGFLAAWMIPQFGWRSV HHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH LLAGGVAPLVLAVALVARMPESVRFMVATRRPVERIRATLARVSARAREAGSFVLTETVP HHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC RTEGKGAAVVLSRPYRVGSVMLWIAYFMGLVIFYASINWMPILLKDAGLAPKAATLISAL CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH FPLGGVGAVLSGALMDRFNANRVVAVCYALTAVSVYAIGQAAGNVGALVVVVFLAGVLMN HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TAQSSLPALAAAFYPTSGRGTGVAWMLGIGRFGGIAGSFLVAELTARHVSFSGVFATIAV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGLVSCAALLVKQGVRPQQAAQGGEQAESLGH HHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCC >Mature Secondary Structure MNRSPIVNVQTFINEQPFGAFQWLIFLMCFVIVLLDGFDTAAIGFIAPSLLSEWHLTKPD CCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC LAPVLSAALFGLACGALVSGPLSDRLGRRALLIGSVLLFGVACLASAFASSIGTLTTLRF HHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTGVGLGAAMPNAVTMMGEFCPDRRRATLINLMFCGFPLGAAFGGFLAAWMIPQFGWRSV HHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH LLAGGVAPLVLAVALVARMPESVRFMVATRRPVERIRATLARVSARAREAGSFVLTETVP HHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC RTEGKGAAVVLSRPYRVGSVMLWIAYFMGLVIFYASINWMPILLKDAGLAPKAATLISAL CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH FPLGGVGAVLSGALMDRFNANRVVAVCYALTAVSVYAIGQAAGNVGALVVVVFLAGVLMN HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TAQSSLPALAAAFYPTSGRGTGVAWMLGIGRFGGIAGSFLVAELTARHVSFSGVFATIAV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGLVSCAALLVKQGVRPQQAAQGGEQAESLGH HHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]