Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025213
Identifier: 238025213
GI number: 238025213
Start: 2350323
End: 2351129
Strand: Reverse
Name: 238025213
Synonym: bglu_2g18840
Alternate gene names: NA
Gene position: 2351129-2350323 (Counterclockwise)
Preceding gene: 238025221
Following gene: 238025211
Centisome position: 83.16
GC content: 73.98
Gene sequence:
>807_bases ATGGAAACCGCACTGATTCTCGGCGCGCTGGTGGGCGCGGTACTCGGCTTGACCGGTGCGGGCGGCGGCATCCTCGCGGT GCCGGCGCTGGTGGTGGGCCTTGGCTGGCCGATGCAGCAGGCCACGCCGGTGGCGTTGATCGCGGTGTCGGGCAGCGCGG CGATCGGCGCGCTCGAGGCGTTCCGGCAGCGGCTGGTGCGCTATCGCGCGGCCTTGCTGATGGCAGCCGCGGGCATGCCG GCCACCTCGCTCGGCGTGCGTGCCGCCCATGCGCTGCCGCAGCGGCTGCTGCTCGCGCTGTTCGCGGCGGTGATGCTGGT GGTGGCGCTGCGCTTGTGGCGCCAGGTGCGGGCCGGCCGCAGCGCCCAGGCCGAGGCTTCGCCGCTTTGCGTCGGCCGCA TCAATCCAGAGACGGGCCGGCTGGCCTGGACGCCGCGCACCGCCCTCGCACTCGCGGCGACGGGCGCCGTCACCGGGTTC ATGACCGGGCTGCTCGGCGTGGGCGGCGGCTTCATCATCGTGCCGATGCTGCGCAAGCTGACCAACGTGTCGATGCACGG GGTGGTGGCCACCTCGCTGATGGTGATCGCGCTGGTGGGCGTGGGCGGCATCGCCTCGACCATCGCGCACGGCACGCCGG TGCCGGCCCAGGTCGCGATCTGGTTCAGCGTCACCACGGCGGTCGGCATGCTGGCGGGGCGTCTCGCCTCGCACCGGCTC GCCGACCGCTACGTGCAGGCCGGTTTCGCCGCGGTGCTGAGCGTGGTCGCGCTCGGGCTGCTCGCCAAGGCGGCGTTCGG CGCCTGA
Upstream 100 bases:
>100_bases CCGCCGCCGTTGTTCGTCCGCCGCCTGCCCGCAGGCCGGCCGGCCCGCCGCCGCGCCGGCCCTCGCGCATGTCCACGCCG GCCGCCGCCGGAGCCGCTGA
Downstream 100 bases:
>100_bases ACCGGGCGGAGGCGCCGGGGCATGCGGTGCCCGAGAGGGGGCCGAACCGGCGGCATAGGGGCCGTTGTGCGGCTCGCCCG GCAATCATGCGGGGCCGCTC
Product: putative permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues METALILGALVGAVLGLTGAGGGILAVPALVVGLGWPMQQATPVALIAVSGSAAIGALEAFRQRLVRYRAALLMAAAGMP ATSLGVRAAHALPQRLLLALFAAVMLVVALRLWRQVRAGRSAQAEASPLCVGRINPETGRLAWTPRTALALAATGAVTGF MTGLLGVGGGFIIVPMLRKLTNVSMHGVVATSLMVIALVGVGGIASTIAHGTPVPAQVAIWFSVTTAVGMLAGRLASHRL ADRYVQAGFAAVLSVVALGLLAKAAFGA
Sequences:
>Translated_268_residues METALILGALVGAVLGLTGAGGGILAVPALVVGLGWPMQQATPVALIAVSGSAAIGALEAFRQRLVRYRAALLMAAAGMP ATSLGVRAAHALPQRLLLALFAAVMLVVALRLWRQVRAGRSAQAEASPLCVGRINPETGRLAWTPRTALALAATGAVTGF MTGLLGVGGGFIIVPMLRKLTNVSMHGVVATSLMVIALVGVGGIASTIAHGTPVPAQVAIWFSVTTAVGMLAGRLASHRL ADRYVQAGFAAVLSVVALGLLAKAAFGA >Mature_268_residues METALILGALVGAVLGLTGAGGGILAVPALVVGLGWPMQQATPVALIAVSGSAAIGALEAFRQRLVRYRAALLMAAAGMP ATSLGVRAAHALPQRLLLALFAAVMLVVALRLWRQVRAGRSAQAEASPLCVGRINPETGRLAWTPRTALALAATGAVTGF MTGLLGVGGGFIIVPMLRKLTNVSMHGVVATSLMVIALVGVGGIASTIAHGTPVPAQVAIWFSVTTAVGMLAGRLASHRL ADRYVQAGFAAVLSVVALGLLAKAAFGA
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26976; Mature: 26976
Theoretical pI: Translated: 12.45; Mature: 12.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METALILGALVGAVLGLTGAGGGILAVPALVVGLGWPMQQATPVALIAVSGSAAIGALEA CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH FRQRLVRYRAALLMAAAGMPATSLGVRAAHALPQRLLLALFAAVMLVVALRLWRQVRAGR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAQAEASPLCVGRINPETGRLAWTPRTALALAATGAVTGFMTGLLGVGGGFIIVPMLRKL CCCCCCCCEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TNVSMHGVVATSLMVIALVGVGGIASTIAHGTPVPAQVAIWFSVTTAVGMLAGRLASHRL HCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ADRYVQAGFAAVLSVVALGLLAKAAFGA HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure METALILGALVGAVLGLTGAGGGILAVPALVVGLGWPMQQATPVALIAVSGSAAIGALEA CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH FRQRLVRYRAALLMAAAGMPATSLGVRAAHALPQRLLLALFAAVMLVVALRLWRQVRAGR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAQAEASPLCVGRINPETGRLAWTPRTALALAATGAVTGFMTGLLGVGGGFIIVPMLRKL CCCCCCCCEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TNVSMHGVVATSLMVIALVGVGGIASTIAHGTPVPAQVAIWFSVTTAVGMLAGRLASHRL HCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ADRYVQAGFAAVLSVVALGLLAKAAFGA HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA