Click here to switch to the map view.

The map label for this gene is yrdA [C]

Identifier: 238025207

GI number: 238025207

Start: 2341055

End: 2341585

Strand: Reverse

Name: yrdA [C]

Synonym: bglu_2g18780

Alternate gene names: 238025207

Gene position: 2341585-2341055 (Counterclockwise)

Preceding gene: 238025208

Following gene: 238025205

Centisome position: 82.82

GC content: 70.06

Gene sequence:

>531_bases
ATGGCGATTTATCGACTCGGGGATCGCGTGCCGTCGATCCACCCCGACGCGTTCGTGGCCGATTCGGCGGACGTGATCGG
CGACGTGCGGCTCGACGCCGACACCAGCGTCTGGTTCGGTGCCGTGCTGCGCGGCGACACGGAGCCGATCGTGATCGGCG
AGGGCACCAACGTGCAGGACGGTGCGGTGCTGCATACCGAACGCGATCGTCCGCTGCATGTGGCCGCTCACGTCACGATC
GGGCACCAGGTGGTGCTGCACGGCTGCACGATCGGCGACTACAGCCTGGTCGGCATTCAGGCGGTGGTGCTCGACGGCGC
GCAGATCGGCCGCCAGTGCCTGGTGGGCGCGGGCGCGGTCGTCACGGCCGGCACCGTGGTCCCGGATGGCTCGCTGGTGC
TCGGCGCGCCGGCCAAGGTGGTGCGGCCCTTGTCGGAGGCTGAACTCGCGCGCCTGCGCGGCAACATCGAGTTCTATGCC
GACCAGCGGCGGCCGCAATACCTGCGCGAGCTGGTACGCGTGACGCGGTGA

Upstream 100 bases:

>100_bases
ATCCTCACGGCGGCCCAGGTGCGCGACATGTTCGGGCTCGGCATCAAGCCGGCCGCGCGTCGCGAGCGCGACCCCCAGAC
CGCGGCGGGCTGAGCGGGCC

Downstream 100 bases:

>100_bases
GCCGGCGGGTGTGGCCGCCCCGCGTGGCCACGCCCGCCCGCCGCACCGGGCCGGCGCAGGCCTGCCCGATGCCCGCCGCG
CGCCTAGTCCGGCTTGCCGC

Product: transferase hexapeptide domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAIYRLGDRVPSIHPDAFVADSADVIGDVRLDADTSVWFGAVLRGDTEPIVIGEGTNVQDGAVLHTERDRPLHVAAHVTI
GHQVVLHGCTIGDYSLVGIQAVVLDGAQIGRQCLVGAGAVVTAGTVVPDGSLVLGAPAKVVRPLSEAELARLRGNIEFYA
DQRRPQYLRELVRVTR

Sequences:

>Translated_176_residues
MAIYRLGDRVPSIHPDAFVADSADVIGDVRLDADTSVWFGAVLRGDTEPIVIGEGTNVQDGAVLHTERDRPLHVAAHVTI
GHQVVLHGCTIGDYSLVGIQAVVLDGAQIGRQCLVGAGAVVTAGTVVPDGSLVLGAPAKVVRPLSEAELARLRGNIEFYA
DQRRPQYLRELVRVTR
>Mature_175_residues
AIYRLGDRVPSIHPDAFVADSADVIGDVRLDADTSVWFGAVLRGDTEPIVIGEGTNVQDGAVLHTERDRPLHVAAHVTIG
HQVVLHGCTIGDYSLVGIQAVVLDGAQIGRQCLVGAGAVVTAGTVVPDGSLVLGAPAKVVRPLSEAELARLRGNIEFYAD
QRRPQYLRELVRVTR

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=170, Percent_Identity=40.5882352941176, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1787667, Length=159, Percent_Identity=42.1383647798742, Blast_Score=112, Evalue=9e-27,
Organism=Escherichia coli, GI87081681, Length=161, Percent_Identity=39.7515527950311, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18734; Mature: 18602

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIYRLGDRVPSIHPDAFVADSADVIGDVRLDADTSVWFGAVLRGDTEPIVIGEGTNVQD
CEEEECCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCC
GAVLHTERDRPLHVAAHVTIGHQVVLHGCTIGDYSLVGIQAVVLDGAQIGRQCLVGAGAV
CEEEEECCCCCEEEEEEEEECCEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHCCCCE
VTAGTVVPDGSLVLGAPAKVVRPLSEAELARLRGNIEFYADQRRPQYLRELVRVTR
EEECEECCCCCEEEECCHHHHCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AIYRLGDRVPSIHPDAFVADSADVIGDVRLDADTSVWFGAVLRGDTEPIVIGEGTNVQD
EEEECCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCC
GAVLHTERDRPLHVAAHVTIGHQVVLHGCTIGDYSLVGIQAVVLDGAQIGRQCLVGAGAV
CEEEEECCCCCEEEEEEEEECCEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHCCCCE
VTAGTVVPDGSLVLGAPAKVVRPLSEAELARLRGNIEFYADQRRPQYLRELVRVTR
EEECEECCCCCEEEECCHHHHCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]