Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025205
Identifier: 238025205
GI number: 238025205
Start: 2338848
End: 2339876
Strand: Reverse
Name: 238025205
Synonym: bglu_2g18760
Alternate gene names: NA
Gene position: 2339876-2338848 (Counterclockwise)
Preceding gene: 238025207
Following gene: 238025204
Centisome position: 82.76
GC content: 72.4
Gene sequence:
>1029_bases ATGCGCAATCCCAACCTCGACACCCTGCTGTGCGCGCTGCTCGGCCCGGCTACTGCCGATGCGCTGTTCGCGACGCTGGA CCTGCCGCCGTGCCTGGCCGATTGCGAGCCCGGCAGCGTCACGCGCGCCGAGCTCGCGCAAGCCATGAACATGGCGCTGT TCGAGGGCCTGCTCGAACGCTCGCCGAACGGCCGCGCCTACACGCGCGAGACGGTCGAGGCGGGCGGCTCGGTGTGCTTC GATCACGGCGCGCTGCGCACCGTGCGCTGGCACGACAACGGCGCGCTGCCGCCCGGCGAGGCCGCCTTCGCACGCATCCT GCGCCCGCTCGGGTTCCGCCCGAACGGCCGCTATCCGCTCGACCGGCTCGGCATGACGGGCCGCGCCTACGCGCACGAGG ACGCGCCCGAGCACATCGCCCAGTTCTTCGTCAGCGAGCTGCACCCCGAGCGTTTCTCGGCCGCGTTCCAGCACGCCGTC TCTAACGTGGTGTGCAGCTCGCGCGATCCGCTCACGCCCGAGGCCGCCGCCCTGCTCTGGGAGCTCGAGCGCGACGGCAC GCTGCCGCTCGCGGCCGCGCAGCGGCTGCTGCCGGTGCTGGTGGGCGCGTTCGCGCGCCAGCACGACGTGCCGGCCGTGG CGGACTACGAGGTGCTGCTCGCCGAATCGGCCGAGATGGCCTGGATCGCGACCGAGGGCAATGCGTTCAACCACGCCACC GACCGCGTGGCCGACGTGTTCGCGCTGGCCGAGGCCGAGAAGGCCAAGGGCCGGCCGATGAAGCCCGAGGTCGAGCGTTC GCGCTCGGGACGCGTGTTCCAGACCGCCTACCGCGCCGACATCGTCGAGCGCGAGTTCCGGACCGCCGACGGCCGCCTGC TCTCGCGCAGCGTGCCGGGCTCGTTCTACGAATTCATCACGCGCAAGCGCGAGTTCGATCGCGCCACGCAGCGCTGGACG CTCGACCTGCGCTTCGACGCCGGCAACGCGCAGGGCATCTTCCGCATGACCGCGAACGCGGGCGGCTGA
Upstream 100 bases:
>100_bases TAATGCAGCGGGCTCAAGCGAGGCGGCGCCTGCGAATCGGGCGCGTGCCGCGCGCGGCCGGCCCGCCGGCGAGCCCGCCC CTGTTCCGACGAGAGACCCG
Downstream 100 bases:
>100_bases CGCGGCGCCGGCCCGAGCCTGCAGTCCGGCCGGGCGGCCTCCCGGTGCCGGACTTGATGAGCAAACCGCAAGAGGTGGTG CGCAGATCTCGTTTGATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRNPNLDTLLCALLGPATADALFATLDLPPCLADCEPGSVTRAELAQAMNMALFEGLLERSPNGRAYTRETVEAGGSVCF DHGALRTVRWHDNGALPPGEAAFARILRPLGFRPNGRYPLDRLGMTGRAYAHEDAPEHIAQFFVSELHPERFSAAFQHAV SNVVCSSRDPLTPEAAALLWELERDGTLPLAAAQRLLPVLVGAFARQHDVPAVADYEVLLAESAEMAWIATEGNAFNHAT DRVADVFALAEAEKAKGRPMKPEVERSRSGRVFQTAYRADIVEREFRTADGRLLSRSVPGSFYEFITRKREFDRATQRWT LDLRFDAGNAQGIFRMTANAGG
Sequences:
>Translated_342_residues MRNPNLDTLLCALLGPATADALFATLDLPPCLADCEPGSVTRAELAQAMNMALFEGLLERSPNGRAYTRETVEAGGSVCF DHGALRTVRWHDNGALPPGEAAFARILRPLGFRPNGRYPLDRLGMTGRAYAHEDAPEHIAQFFVSELHPERFSAAFQHAV SNVVCSSRDPLTPEAAALLWELERDGTLPLAAAQRLLPVLVGAFARQHDVPAVADYEVLLAESAEMAWIATEGNAFNHAT DRVADVFALAEAEKAKGRPMKPEVERSRSGRVFQTAYRADIVEREFRTADGRLLSRSVPGSFYEFITRKREFDRATQRWT LDLRFDAGNAQGIFRMTANAGG >Mature_342_residues MRNPNLDTLLCALLGPATADALFATLDLPPCLADCEPGSVTRAELAQAMNMALFEGLLERSPNGRAYTRETVEAGGSVCF DHGALRTVRWHDNGALPPGEAAFARILRPLGFRPNGRYPLDRLGMTGRAYAHEDAPEHIAQFFVSELHPERFSAAFQHAV SNVVCSSRDPLTPEAAALLWELERDGTLPLAAAQRLLPVLVGAFARQHDVPAVADYEVLLAESAEMAWIATEGNAFNHAT DRVADVFALAEAEKAKGRPMKPEVERSRSGRVFQTAYRADIVEREFRTADGRLLSRSVPGSFYEFITRKREFDRATQRWT LDLRFDAGNAQGIFRMTANAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37568; Mature: 37568
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNPNLDTLLCALLGPATADALFATLDLPPCLADCEPGSVTRAELAQAMNMALFEGLLER CCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC SPNGRAYTRETVEAGGSVCFDHGALRTVRWHDNGALPPGEAAFARILRPLGFRPNGRYPL CCCCCCCHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCH DRLGMTGRAYAHEDAPEHIAQFFVSELHPERFSAAFQHAVSNVVCSSRDPLTPEAAALLW HHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ELERDGTLPLAAAQRLLPVLVGAFARQHDVPAVADYEVLLAESAEMAWIATEGNAFNHAT HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCEEEEEECCCCCHHHH DRVADVFALAEAEKAKGRPMKPEVERSRSGRVFQTAYRADIVEREFRTADGRLLSRSVPG HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHECCCCCH SFYEFITRKREFDRATQRWTLDLRFDAGNAQGIFRMTANAGG HHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCCCC >Mature Secondary Structure MRNPNLDTLLCALLGPATADALFATLDLPPCLADCEPGSVTRAELAQAMNMALFEGLLER CCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC SPNGRAYTRETVEAGGSVCFDHGALRTVRWHDNGALPPGEAAFARILRPLGFRPNGRYPL CCCCCCCHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCH DRLGMTGRAYAHEDAPEHIAQFFVSELHPERFSAAFQHAVSNVVCSSRDPLTPEAAALLW HHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ELERDGTLPLAAAQRLLPVLVGAFARQHDVPAVADYEVLLAESAEMAWIATEGNAFNHAT HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCEEEEEECCCCCHHHH DRVADVFALAEAEKAKGRPMKPEVERSRSGRVFQTAYRADIVEREFRTADGRLLSRSVPG HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHECCCCCH SFYEFITRKREFDRATQRWTLDLRFDAGNAQGIFRMTANAGG HHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA