Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025188
Identifier: 238025188
GI number: 238025188
Start: 2316674
End: 2317681
Strand: Reverse
Name: 238025188
Synonym: bglu_2g18590
Alternate gene names: NA
Gene position: 2317681-2316674 (Counterclockwise)
Preceding gene: 238025189
Following gene: 238025186
Centisome position: 81.97
GC content: 69.84
Gene sequence:
>1008_bases GTGCGCGCGATGGTCGTGACTTTCGCCCTGCTGCTGGCGGCGGCCGGCATCATCTATTTTTCCTGCGAAACCTTCGTGAA CGGCGTGGAATGGCTCGGCCGCAAGCTGAACCTGACGCAGACGGCCACCGGCACGATCCTCGCCGCGTTCGGCACCGCGC TGCCCGAGAGCGTGGTCACGCTGGTGGCGGTCGCCTTCGGCACCACGCCGGCGCACAAGGAGATCGGCGTGGGCGCCGCG ATCGGCGGCCCGCTGGCGTTGAGCACCGTGGCCTACTCGGTGGTGGGCTTCGCGCTGCTGGCCGTCGCGCGCCGCGCGGG CCGCGATGCCAAGGCCGGGGTGGACGCAAACACCGCGCAGCTGCGCCGCGACCAGCTCTGGTTTCTCGCGATCTTCGTCG CCAAGATCGGCCTCGGCCTGGTGGTGTTCCAGTTCAAGCCGCTGCTCGGCATCGCGTTCCTGGCGGCCTATGCGTTCTAC TGCTGGCGCGAGCTGACGGCCGACGGCGACGGCGCCGCCCACGACGAACTCGAGCCGCTGATGCTGCGGCCGCGCTCGGA CGACCCGGCGCTCGGCTGGGTGATCCTGCAGACGCTGGGCGCGCTGGTGGTGATCTTCGCCGCCTCGCACCTGTTCGTCG GCCAGATCGGCGCGGTGGGGCCGTGGCTCGGCCTGAGCCCGCAGCTGACGGCGCTGCTGTTCAGCCCGATCGCGACCGAG CTGCCCGAGATCATGAACGCGGTGATCTGGGTGCGCCAGCGCAAGGAGCGGCTCGCGCTCGCCAATATCAGCGGCGCGAT GATGATCCAGGCGACGATCCCCACCGCGTTCGGCCTGTTCTTCACGCCGTGGCACCTGGCGTCGCCTTCGATCCTCGCGG CGGTGATGACGGCGATCGCGATCGTGTTCCTGCAGTTCGTGTTTCGCGCGCCGCGGGTCAGCAGCGGCCTGCTGGCCTGC GTGGGCGGTCTCTATGCGGTGTTCGCCGCGCTGCTGTTCGTGATCTGA
Upstream 100 bases:
>100_bases GGCCGGGCGGAGGGCAGCGTCATGGTTGCGTCGCCCGGCCCTGGAGATAACAACAGATGTTCCTCACATCCCCATTCCCG GTAGACATCGTCGTGGCGAG
Downstream 100 bases:
>100_bases GGTTCGTGATCCGCGGTGCGGGAGCGGGGCGGCCTGGCCCGCGCTCGCACGGCGTGAACCGTACCCGCGTCCCGCGGCCC CGGCCGGCACCTGGAGCGCA
Product: putative Ca2+/Na+ antiporter
Products: NA
Alternate protein names: Ca2+/Na+ Antiporter; Sodium/Calcium Exchanger Protein; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger; Cation Antiporter; Inner Membrane Protein; Na+/Ca+ Exchanger Protein; Ca2+Cation Antiporter CaCA Family; Sodium/Calcium Exchanger Family Protein; Ca2+/H+ Antiporter
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVTLVAVAFGTTPAHKEIGVGAA IGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQLRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFY CWRELTADGDGAAHDELEPLMLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIAIVFLQFVFRAPRVSSGLLAC VGGLYAVFAALLFVI
Sequences:
>Translated_335_residues MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVTLVAVAFGTTPAHKEIGVGAA IGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQLRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFY CWRELTADGDGAAHDELEPLMLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIAIVFLQFVFRAPRVSSGLLAC VGGLYAVFAALLFVI >Mature_335_residues MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVTLVAVAFGTTPAHKEIGVGAA IGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQLRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFY CWRELTADGDGAAHDELEPLMLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIAIVFLQFVFRAPRVSSGLLAC VGGLYAVFAALLFVI
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35488; Mature: 35488
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LVAVAFGTTPAHKEIGVGAAIGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQ HHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH LRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFYCWRELTADGDGAAHDELEPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH MLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCHHHCCHHHHHHHHHHHH IVFLQFVFRAPRVSSGLLACVGGLYAVFAALLFVI HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LVAVAFGTTPAHKEIGVGAAIGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQ HHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH LRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFYCWRELTADGDGAAHDELEPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH MLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCHHHCCHHHHHHHHHHHH IVFLQFVFRAPRVSSGLLACVGGLYAVFAALLFVI HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA