Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is camA [H]
Identifier: 238025186
GI number: 238025186
Start: 2313427
End: 2314668
Strand: Reverse
Name: camA [H]
Synonym: bglu_2g18570
Alternate gene names: 238025186
Gene position: 2314668-2313427 (Counterclockwise)
Preceding gene: 238025188
Following gene: 238025185
Centisome position: 81.87
GC content: 73.27
Gene sequence:
>1242_bases ATGGACGTACTGGATGTGGTGATCGTCGGGGCGGGGCATGCGGGCGCGAACTGCGCGGCCGAACTGCGCAAGTCCGGCTT CGAGGGCAGCGTCGCGCTGCTGTCGGACGAGACCGAGCCGCCCTACGAGCGGCCGCCGCTGACGAAGGACTATCTGACGG GTGAGCGCGGCACCGAGCAGATCCGCTTCCGCACGCCGGAGGCCTGGCTCGAACGCGCGATCGACGTGCGCCTCGCGCAT CGCGTCGAGGCCGTCGATCCGCAGGCGCACCTGCTGCGCCTGGCCGATGGCCGCAGCTTGCGTTACGGCAAGCTGGTATG GGCCGCGGGCGGCACGCCGCGCCGGCTCGCCTGCGAGGGCGCGATGCTCGACGGCGTCCACGTGATCCGCGCCAAGCGCG ACATCGATGCGCTGAAGGCGGATCTCGCCGGACGTGAGCAGGTGGTGGTGGTGGGCGGCGGCTACGTGGGGCTCGAGGCG GCCGCGGCGCTGACCAAGCTGGGCGGTGTGCGCGTGACGGTGGTCGAGGCGCAGGCGCGCCTGCTCGCACGCGTGGCCGG CGAGGCGCTGTCGGCATTCGTCGAGGCCGAGCATCGCGGCCGCGGCGTGGAGATCGTGACGGGGGCGCAGGTCGCCGCGC TCGCGGGCCGCGACGGGCGCGTGGCCTCGGTCGAGCTGGCCGACGGCCGCTCGATCGCCGCTGACCTCGTGATCGTCGGC ATCGGCATCGTGCCGAACGCACAGCCGCTGCTCGACGCGGGCGCGCGGGGCAGCAACGGCGTGGACGTGGACGAGGCGTG CCTGACCAGCTTGCCCGACGTCTACGCGATCGGCGATTGCGCGTGCCGCGCGCATCCGCTCGTGGCGGGCGGCGCACGGC GCATCGAGAGCGTGCCGAACGCGGTCGAGCAGGCCGGCATCGTGGCCGCGGCGATCACCGGCAAGCCGGCGCCGAAGCCG GGCGTACCGTGGTTCTGGTCGACCCAATACGACCTGCGCATCCAGATGGCCGGGATTGCCGACGGCCATGACGAGGTGGT GGTGCGCGGCGACGTGGCCGCGCGTGCGTTCGTGGTGCTCTATCTGCGCGGCGGCCGCGTGATCGCGCTCGACGCCGTGA ACGCGACCAAGGAGTACGTGCAGGGGCGCGCCTTGATCGCGGCCGACGTCGTGCTGACGCGCGAGCAGCTCGAGGACGTG TCGGTGCCGCTGCAGGCGCGCATGCCGGCCGCGAGCGTCTGA
Upstream 100 bases:
>100_bases GTTAGGCCTGCCGCCGCGGTGCACCGGATGCGCCGGCGCGCGCTGCCGCCGGGATCGCGTCCGGCCGGACCACGGACGCA ACTGAACAAAGGAACGAAGC
Downstream 100 bases:
>100_bases GTGCCGGCGGCGGCGTGGCGGGCGCCGGCCGCGTGCGAGGCGGCCGGTGCATGGCGCCGTCTGCCCCGGCCTCGCGGCCG CGCCGTCGCGGGTCGCGCGG
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: oxidized ferredoxin; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MDVLDVVIVGAGHAGANCAAELRKSGFEGSVALLSDETEPPYERPPLTKDYLTGERGTEQIRFRTPEAWLERAIDVRLAH RVEAVDPQAHLLRLADGRSLRYGKLVWAAGGTPRRLACEGAMLDGVHVIRAKRDIDALKADLAGREQVVVVGGGYVGLEA AAALTKLGGVRVTVVEAQARLLARVAGEALSAFVEAEHRGRGVEIVTGAQVAALAGRDGRVASVELADGRSIAADLVIVG IGIVPNAQPLLDAGARGSNGVDVDEACLTSLPDVYAIGDCACRAHPLVAGGARRIESVPNAVEQAGIVAAAITGKPAPKP GVPWFWSTQYDLRIQMAGIADGHDEVVVRGDVAARAFVVLYLRGGRVIALDAVNATKEYVQGRALIAADVVLTREQLEDV SVPLQARMPAASV
Sequences:
>Translated_413_residues MDVLDVVIVGAGHAGANCAAELRKSGFEGSVALLSDETEPPYERPPLTKDYLTGERGTEQIRFRTPEAWLERAIDVRLAH RVEAVDPQAHLLRLADGRSLRYGKLVWAAGGTPRRLACEGAMLDGVHVIRAKRDIDALKADLAGREQVVVVGGGYVGLEA AAALTKLGGVRVTVVEAQARLLARVAGEALSAFVEAEHRGRGVEIVTGAQVAALAGRDGRVASVELADGRSIAADLVIVG IGIVPNAQPLLDAGARGSNGVDVDEACLTSLPDVYAIGDCACRAHPLVAGGARRIESVPNAVEQAGIVAAAITGKPAPKP GVPWFWSTQYDLRIQMAGIADGHDEVVVRGDVAARAFVVLYLRGGRVIALDAVNATKEYVQGRALIAADVVLTREQLEDV SVPLQARMPAASV >Mature_413_residues MDVLDVVIVGAGHAGANCAAELRKSGFEGSVALLSDETEPPYERPPLTKDYLTGERGTEQIRFRTPEAWLERAIDVRLAH RVEAVDPQAHLLRLADGRSLRYGKLVWAAGGTPRRLACEGAMLDGVHVIRAKRDIDALKADLAGREQVVVVGGGYVGLEA AAALTKLGGVRVTVVEAQARLLARVAGEALSAFVEAEHRGRGVEIVTGAQVAALAGRDGRVASVELADGRSIAADLVIVG IGIVPNAQPLLDAGARGSNGVDVDEACLTSLPDVYAIGDCACRAHPLVAGGARRIESVPNAVEQAGIVAAAITGKPAPKP GVPWFWSTQYDLRIQMAGIADGHDEVVVRGDVAARAFVVLYLRGGRVIALDAVNATKEYVQGRALIAADVVLTREQLEDV SVPLQARMPAASV
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21389617, Length=377, Percent_Identity=31.8302387267904, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI65787454, Length=377, Percent_Identity=31.8302387267904, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI226437568, Length=377, Percent_Identity=31.8302387267904, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI4757732, Length=335, Percent_Identity=25.3731343283582, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI22202629, Length=335, Percent_Identity=25.3731343283582, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1788892, Length=402, Percent_Identity=32.5870646766169, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1789065, Length=276, Percent_Identity=25.7246376811594, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789765, Length=309, Percent_Identity=26.8608414239482, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17559934, Length=402, Percent_Identity=28.6069651741293, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI24639257, Length=407, Percent_Identity=27.5184275184275, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI281359715, Length=407, Percent_Identity=27.5184275184275, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI281359713, Length=407, Percent_Identity=27.5184275184275, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24639250, Length=407, Percent_Identity=27.5184275184275, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI18543267, Length=407, Percent_Identity=27.5184275184275, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24639252, Length=407, Percent_Identity=27.5184275184275, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24581020, Length=362, Percent_Identity=25.6906077348066, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI28573993, Length=362, Percent_Identity=25.6906077348066, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24585130, Length=366, Percent_Identity=26.2295081967213, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3
Molecular weight: Translated: 43283; Mature: 43283
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLDVVIVGAGHAGANCAAELRKSGFEGSVALLSDETEPPYERPPLTKDYLTGERGTEQ CCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCE IRFRTPEAWLERAIDVRLAHRVEAVDPQAHLLRLADGRSLRYGKLVWAAGGTPRRLACEG EEEECCHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCEEECEEEEECCCCCCEEEECC AMLDGVHVIRAKRDIDALKADLAGREQVVVVGGGYVGLEAAAALTKLGGVRVTVVEAQAR CEECCEEEEEEHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEHHHHH LLARVAGEALSAFVEAEHRGRGVEIVTGAQVAALAGRDGRVASVELADGRSIAADLVIVG HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEEECCCCCCEEEEEEEE IGIVPNAQPLLDAGARGSNGVDVDEACLTSLPDVYAIGDCACRAHPLVAGGARRIESVPN ECCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCHHHCCCCEECCCHHHHHHHHH AVEQAGIVAAAITGKPAPKPGVPWFWSTQYDLRIQMAGIADGHDEVVVRGDVAARAFVVL HHHHCCEEEEEECCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCEEEECCHHHEEEEEE YLRGGRVIALDAVNATKEYVQGRALIAADVVLTREQLEDVSVPLQARMPAASV EEECCEEEEEECCHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCHHHCCCCCCC >Mature Secondary Structure MDVLDVVIVGAGHAGANCAAELRKSGFEGSVALLSDETEPPYERPPLTKDYLTGERGTEQ CCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCE IRFRTPEAWLERAIDVRLAHRVEAVDPQAHLLRLADGRSLRYGKLVWAAGGTPRRLACEG EEEECCHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCEEECEEEEECCCCCCEEEECC AMLDGVHVIRAKRDIDALKADLAGREQVVVVGGGYVGLEAAAALTKLGGVRVTVVEAQAR CEECCEEEEEEHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEHHHHH LLARVAGEALSAFVEAEHRGRGVEIVTGAQVAALAGRDGRVASVELADGRSIAADLVIVG HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEEECCCCCCEEEEEEEE IGIVPNAQPLLDAGARGSNGVDVDEACLTSLPDVYAIGDCACRAHPLVAGGARRIESVPN ECCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCHHHCCCCEECCCHHHHHHHHH AVEQAGIVAAAITGKPAPKPGVPWFWSTQYDLRIQMAGIADGHDEVVVRGDVAARAFVVL HHHHCCEEEEEECCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCEEEECCHHHEEEEEE YLRGGRVIALDAVNATKEYVQGRALIAADVVLTREQLEDVSVPLQARMPAASV EEECCEEEEEECCHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced ferredoxin; NAD+
Specific reaction: reduced ferredoxin + NAD+ = oxidized ferredoxin + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]