Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025185
Identifier: 238025185
GI number: 238025185
Start: 2312470
End: 2312919
Strand: Reverse
Name: 238025185
Synonym: bglu_2g18560
Alternate gene names: NA
Gene position: 2312919-2312470 (Counterclockwise)
Preceding gene: 238025186
Following gene: 238025175
Centisome position: 81.81
GC content: 65.33
Gene sequence:
>450_bases ATGAGCACCCACGTTGTGTCGGTTCTGAACGATCTGGTCGAAACGTCGAAGGACGGGCAGCTGGGCTTCGAGAAAGCGGC CGAGGATGCCCACGATCCGCAGCTGAAGACGCTGTTCCAGACGCGTGCCGCCGATTGCGCGCGCAGTGCCGGCGAACTGC AGGCGCTGGTCCAGCAACTCGGGGGCGATCCCAAGACGAGCGGCTCGGCCACGGGCGCGCTGCATCGCGGCTGGGTCAAT CTCAAGTCGGCCGTCACCGACCGCAGCGACCACGACATCCTCACCGAGTGCGAGCGCGGCGAGGATGCCGCGAAGAAGCG CTATCACGACGCGCTCGAAAAGGACGATCTGCCCATCGAGGTGCGCACCCTGATCGAGCGGCAGTACCAGGGCGTGTTGC AGAATCACGATCGCGTTCGTGACTTGCGCGACCAGTTCGCGAGCCGCTGA
Upstream 100 bases:
>100_bases ACGGGCCGCGCCGTCGCCCGGCGCGGCGATGGGTATGGCGTTTGCTCGAAAGGCTTGCCGCCTGACGGCACTCTTGCTTC CACCCATGAGGAGATACGCC
Downstream 100 bases:
>100_bases CGGCCGGCGCCGCGGCGATGCCGGGCCGGTGGCACGGGGCCGCCGGCGTGCGCCGTGCCCCGGGGCCGCAAGCTCACGGG GCGCCGCGCGCGGCCTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSTHVVSVLNDLVETSKDGQLGFEKAAEDAHDPQLKTLFQTRAADCARSAGELQALVQQLGGDPKTSGSATGALHRGWVN LKSAVTDRSDHDILTECERGEDAAKKRYHDALEKDDLPIEVRTLIERQYQGVLQNHDRVRDLRDQFASR
Sequences:
>Translated_149_residues MSTHVVSVLNDLVETSKDGQLGFEKAAEDAHDPQLKTLFQTRAADCARSAGELQALVQQLGGDPKTSGSATGALHRGWVN LKSAVTDRSDHDILTECERGEDAAKKRYHDALEKDDLPIEVRTLIERQYQGVLQNHDRVRDLRDQFASR >Mature_148_residues STHVVSVLNDLVETSKDGQLGFEKAAEDAHDPQLKTLFQTRAADCARSAGELQALVQQLGGDPKTSGSATGALHRGWVNL KSAVTDRSDHDILTECERGEDAAKKRYHDALEKDDLPIEVRTLIERQYQGVLQNHDRVRDLRDQFASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16551; Mature: 16420
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHVVSVLNDLVETSKDGQLGFEKAAEDAHDPQLKTLFQTRAADCARSAGELQALVQQL CCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGDPKTSGSATGALHRGWVNLKSAVTDRSDHDILTECERGEDAAKKRYHDALEKDDLPIE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHH VRTLIERQYQGVLQNHDRVRDLRDQFASR HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STHVVSVLNDLVETSKDGQLGFEKAAEDAHDPQLKTLFQTRAADCARSAGELQALVQQL CHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGDPKTSGSATGALHRGWVNLKSAVTDRSDHDILTECERGEDAAKKRYHDALEKDDLPIE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHH VRTLIERQYQGVLQNHDRVRDLRDQFASR HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA