Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025125
Identifier: 238025125
GI number: 238025125
Start: 2228585
End: 2229271
Strand: Reverse
Name: 238025125
Synonym: bglu_2g17860
Alternate gene names: NA
Gene position: 2229271-2228585 (Counterclockwise)
Preceding gene: 238025126
Following gene: 238025124
Centisome position: 78.85
GC content: 66.96
Gene sequence:
>687_bases ATGAACCAATCTGCTGGTTCTCGCACCTGCGTGGCGGCAATGTCCGCCGCGCTCGCGCTCGGCCTGGGCGCCTGCGCAAC CGAATCCTCGCGCAGCCTGCCGGTGGCGCCGACCCCCAGTGCCCAGGTGCCGTTCGCCGGCAAGCCGGTGACGATCTCGG TCGGCAAGTTCGACAACCGCTCGAGCTACATGCGCGGCATCTTCTCCGACGGCATCGACCGCCTCGGCGGCCAGGCCAAG ACGATCCTGATCACGCACCTGCAGCAGAGCCGCCGCTTCAGCGTGCTCGACCGCGACAACCTCGATGAGATCCGCCAGGA ATCGGCCTTTCTGAAACAGCAGCAGGCGGTGAAGGGCGCGCGCTACGTGGTGACCGGCGACGTCACCGAGTTCGGCCGCA AGGAGGTCGGCGATCACGAACTGTTCGGCATCCTCGGTAGCAGCAAGCAGCAGGTGGCCTATGCCAAGGTCAACCTCAAT ATCGTCGATGCCGCCACCTCCGAGGTCGTGCTGTCCAGCCAGGGTGCCGGCGAGTTCAGCCTGTCAAGCCGCCAGGTGAT CGGTTTCGGCGGCACCGCCAGCTACGATTCGACGCTCAACGGCAAGGTGCTCGACCTGGCGATCCAGGAGGCCGTCGAGC GCCTCGTCGCGCAGGTCGACGCCGGGGCTCTCGGCGCCGCCAAGTGA
Upstream 100 bases:
>100_bases CCCATGGACGTGCCGGACGAGGCATCTGACAGGATCGGCTGATCCGGAACGCATGTTTTAAAAATCGAAGCTTTTACCTT TTACTAATGAGGTTCCCTCT
Downstream 100 bases:
>100_bases GCCGTACATCAATCGTCATCCCTCGTTTCACTCTCGACCACACGACCACGATGAAGACCGCCACGTTCATCCGCGGCGCC GGGCTGTCGCTCGCTGCCGC
Product: CsgG family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNRSSYMRGIFSDGIDRLGGQAK TILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGARYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLN IVDAATSEVVLSSQGAGEFSLSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK
Sequences:
>Translated_228_residues MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNRSSYMRGIFSDGIDRLGGQAK TILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGARYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLN IVDAATSEVVLSSQGAGEFSLSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK >Mature_228_residues MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNRSSYMRGIFSDGIDRLGGQAK TILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGARYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLN IVDAATSEVVLSSQGAGEFSLSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK
Specific function: Unknown
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 - InterPro: IPR007195 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 23927; Mature: 23927
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCH SSYMRGIFSDGIDRLGGQAKTILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGA HHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLNIVDAATSEVVLSSQGAGEFS EEEEECCHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEEEECCCCEEEEECCCCCCEE LSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCH SSYMRGIFSDGIDRLGGQAKTILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGA HHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLNIVDAATSEVVLSSQGAGEFS EEEEECCHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEEEECCCCEEEEECCCCCCEE LSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]