Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025107
Identifier: 238025107
GI number: 238025107
Start: 2210047
End: 2210403
Strand: Reverse
Name: 238025107
Synonym: bglu_2g17660
Alternate gene names: NA
Gene position: 2210403-2210047 (Counterclockwise)
Preceding gene: 238025108
Following gene: 238025101
Centisome position: 78.18
GC content: 67.51
Gene sequence:
>357_bases ATGTTTGCCTCGCCCCAGCGTTCTTCCATCGCCGCGCTGCCCTTCGCCGCGAGCCTGCTGCTGTCGGGCTGCTCGTGGTT CGGCTGGGCGCATCAGCCGTCGTTCTCGTATGCGCGGCTGCCGGTGCCGAGGGCGGCCTCCCAGCCGGGCGCCACGCAGC AGAAGGTGGTGCGTGCCGGCGGCAACCCGTCCAGTGTCTGGATGGTGCGCAACGGGAGCGGCGTTTGCTACAACTACCTG CTCACGCACGGCAGCGAGCATCGTCTCTACTACGTCGTGTTCGATGCCCACGGCGTGGTCACGCATCACGGCTTCTCGTC CTGCATGGAAGCCGATCGCCACGGCGATCTGCGCTGA
Upstream 100 bases:
>100_bases TGCGGGCGCAGATAACTTTACAGAATTCCACATGGATCGGGGCGAGGTGGATTAGGATGCGCAAATGACGACCGATCGTG TTGCACGGAGACTGACCGGC
Downstream 100 bases:
>100_bases CGCGGCTGGCGGCGCGCTGCCAGCCGCGGCGCTTTCCTTTCGAACACCTTGCCAGCACGCCGGTTGCGGCGAACTCGCGG CCGCGCATTCATGACCGCGC
Product: Osmotically-inducible lipoprotein OsmE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MFASPQRSSIAALPFAASLLLSGCSWFGWAHQPSFSYARLPVPRAASQPGATQQKVVRAGGNPSSVWMVRNGSGVCYNYL LTHGSEHRLYYVVFDAHGVVTHHGFSSCMEADRHGDLR
Sequences:
>Translated_118_residues MFASPQRSSIAALPFAASLLLSGCSWFGWAHQPSFSYARLPVPRAASQPGATQQKVVRAGGNPSSVWMVRNGSGVCYNYL LTHGSEHRLYYVVFDAHGVVTHHGFSSCMEADRHGDLR >Mature_118_residues MFASPQRSSIAALPFAASLLLSGCSWFGWAHQPSFSYARLPVPRAASQPGATQQKVVRAGGNPSSVWMVRNGSGVCYNYL LTHGSEHRLYYVVFDAHGVVTHHGFSSCMEADRHGDLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12867; Mature: 12867
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFASPQRSSIAALPFAASLLLSGCSWFGWAHQPSFSYARLPVPRAASQPGATQQKVVRAG CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCC GNPSSVWMVRNGSGVCYNYLLTHGSEHRLYYVVFDAHGVVTHHGFSSCMEADRHGDLR CCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCEEEECCHHHHHHHCCCCCCC >Mature Secondary Structure MFASPQRSSIAALPFAASLLLSGCSWFGWAHQPSFSYARLPVPRAASQPGATQQKVVRAG CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCC GNPSSVWMVRNGSGVCYNYLLTHGSEHRLYYVVFDAHGVVTHHGFSSCMEADRHGDLR CCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCEEEECCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA