Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025075
Identifier: 238025075
GI number: 238025075
Start: 2169831
End: 2171039
Strand: Reverse
Name: 238025075
Synonym: bglu_2g17310
Alternate gene names: NA
Gene position: 2171039-2169831 (Counterclockwise)
Preceding gene: 238025088
Following gene: 238025073
Centisome position: 76.79
GC content: 73.04
Gene sequence:
>1209_bases ATGTTTTCGACCTATGACGGATTCCGGCAACGAGGCATGCGCCTCGACATCTCGCGCGGCAAGCCCGCGCCCGAGCAACT CGATCTGGCGACGCAGCTGTTCGCGGCGGCGGGCGACCCCGGCCACGTCGCGCGCGACGGCACCGATTGCCGGAATTATG GGGGCGGGCTCGGCCTGCCGGAAGCGCGCGAGTTCGGCGCGGCCCTGCTCGGTGTCGAGGCGGCGCACGTCGTGGCGGCC GGCAATTCGAGCCTGGCGCTGATGCACGACGTGCTCGCGTTCGCCGCGCTGCACGGCCTGCCGGGCGGCACCGCGTGGCG CGACGGCCGCGCGGCGATGCTGTGTCCGGTGCCCGGCTACGACCGGCATTTCACCGTCTGCGAGGCGCTCGGCATCCGCA TGATCGCCGTGCCGATGCGCGACGACGGCCCCGACATGGCGGTGGTCGAGTCGCTGGTGCGCGACGACGCGTCGATTCGC GGGATCTGGTGCGTGCCGCTCTACAGCAACCCGACCGGCGCGATCTATTCGGCCGAGACGGTGCGGCGGCTTGCGGCGAT GCCGGCCGCAGCAGCCGATTTCGTGCTGATGTGGGACGACGCGTACCGGTTTCATCACCTCGGCGACACGCCGCACACCA CACCGAACGTCATCGAGGCCTGCGCGGCGGCCGGCCATCCCGATCGCGCGATCGTGTTCGCCTCGCTGTCGAAGGTGACG CTGGCCGGCGCGGGCGTGGCGTTCCTCGCCGCGTCGCCGCGCAACGTCGAATGGTGGGCCCGGCATGCCGGCGCGCGCTC GATCGGACCGGACAAGCTCAACCAGTTGCGGCACGTGCATGCGCTGCGCGACCGGGCCGGCGTGGAGGCGCTGATGGCGC GGCACCGCGCGCTGCTGCGGCCGAAGTTCGAGGCGGTGGAGGCGGCGTTCGCCGCGCGGCTGTCCGGGCTGCCCGGCGTG GCGTGGACGCGCCCGCAGGGCGGCTATTTCGTCAGCCTGCAGGTGCCGCCCGGGCACGCGAAGCGGGTGGTCGCGCTGGC CGCGGCGGCGGGGCTGGTGCTGACGCCGGCCGGTGCCGCGTATCCGTATGGCGACGATGCCGACGACCGCCACCTGCGCA TCGCGCCGTCGTTCCCCTCGCTCGAGGCGGTGCGTCTGGCCGCCAACGGGATCTCGGTGTCGGTGCGCCGGGCGCTGGAG CTGGATTGA
Upstream 100 bases:
>100_bases TATAACTCGTTTGTCTGATGGATGGCCGGCGCGCATACTGGTTGGTCCGGTAGTTCCTGGACAGCCCCCAGACGCCGCGA CGCGGCAGGAGCCACGATCG
Downstream 100 bases:
>100_bases CGGCGGCGGCCGCCTGACGGCAGGCGGCATGTCACCGGAGGCTCATGGCCGGATCTTCATTTCTCGCAGCTGAGGTCCTG CTTACGCACGTCGACGATGA
Product: class I/II aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MFSTYDGFRQRGMRLDISRGKPAPEQLDLATQLFAAAGDPGHVARDGTDCRNYGGGLGLPEAREFGAALLGVEAAHVVAA GNSSLALMHDVLAFAALHGLPGGTAWRDGRAAMLCPVPGYDRHFTVCEALGIRMIAVPMRDDGPDMAVVESLVRDDASIR GIWCVPLYSNPTGAIYSAETVRRLAAMPAAAADFVLMWDDAYRFHHLGDTPHTTPNVIEACAAAGHPDRAIVFASLSKVT LAGAGVAFLAASPRNVEWWARHAGARSIGPDKLNQLRHVHALRDRAGVEALMARHRALLRPKFEAVEAAFAARLSGLPGV AWTRPQGGYFVSLQVPPGHAKRVVALAAAAGLVLTPAGAAYPYGDDADDRHLRIAPSFPSLEAVRLAANGISVSVRRALE LD
Sequences:
>Translated_402_residues MFSTYDGFRQRGMRLDISRGKPAPEQLDLATQLFAAAGDPGHVARDGTDCRNYGGGLGLPEAREFGAALLGVEAAHVVAA GNSSLALMHDVLAFAALHGLPGGTAWRDGRAAMLCPVPGYDRHFTVCEALGIRMIAVPMRDDGPDMAVVESLVRDDASIR GIWCVPLYSNPTGAIYSAETVRRLAAMPAAAADFVLMWDDAYRFHHLGDTPHTTPNVIEACAAAGHPDRAIVFASLSKVT LAGAGVAFLAASPRNVEWWARHAGARSIGPDKLNQLRHVHALRDRAGVEALMARHRALLRPKFEAVEAAFAARLSGLPGV AWTRPQGGYFVSLQVPPGHAKRVVALAAAAGLVLTPAGAAYPYGDDADDRHLRIAPSFPSLEAVRLAANGISVSVRRALE LD >Mature_402_residues MFSTYDGFRQRGMRLDISRGKPAPEQLDLATQLFAAAGDPGHVARDGTDCRNYGGGLGLPEAREFGAALLGVEAAHVVAA GNSSLALMHDVLAFAALHGLPGGTAWRDGRAAMLCPVPGYDRHFTVCEALGIRMIAVPMRDDGPDMAVVESLVRDDASIR GIWCVPLYSNPTGAIYSAETVRRLAAMPAAAADFVLMWDDAYRFHHLGDTPHTTPNVIEACAAAGHPDRAIVFASLSKVT LAGAGVAFLAASPRNVEWWARHAGARSIGPDKLNQLRHVHALRDRAGVEALMARHRALLRPKFEAVEAAFAARLSGLPGV AWTRPQGGYFVSLQVPPGHAKRVVALAAAAGLVLTPAGAAYPYGDDADDRHLRIAPSFPSLEAVRLAANGISVSVRRALE LD
Specific function: Unknown
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: NA
Molecular weight: Translated: 42632; Mature: 42632
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSTYDGFRQRGMRLDISRGKPAPEQLDLATQLFAAAGDPGHVARDGTDCRNYGGGLGLP CCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCC EAREFGAALLGVEAAHVVAAGNSSLALMHDVLAFAALHGLPGGTAWRDGRAAMLCPVPGY HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC DRHFTVCEALGIRMIAVPMRDDGPDMAVVESLVRDDASIRGIWCVPLYSNPTGAIYSAET CCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEHHH VRRLAAMPAAAADFVLMWDDAYRFHHLGDTPHTTPNVIEACAAAGHPDRAIVFASLSKVT HHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHEE LAGAGVAFLAASPRNVEWWARHAGARSIGPDKLNQLRHVHALRDRAGVEALMARHRALLR EECCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKFEAVEAAFAARLSGLPGVAWTRPQGGYFVSLQVPPGHAKRVVALAAAAGLVLTPAGAA CHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHCCEEEECCCCC YPYGDDADDRHLRIAPSFPSLEAVRLAANGISVSVRRALELD CCCCCCCCCCEEEEECCCCCHHHHEEECCCCEEEEEEEECCC >Mature Secondary Structure MFSTYDGFRQRGMRLDISRGKPAPEQLDLATQLFAAAGDPGHVARDGTDCRNYGGGLGLP CCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCC EAREFGAALLGVEAAHVVAAGNSSLALMHDVLAFAALHGLPGGTAWRDGRAAMLCPVPGY HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC DRHFTVCEALGIRMIAVPMRDDGPDMAVVESLVRDDASIRGIWCVPLYSNPTGAIYSAET CCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEHHH VRRLAAMPAAAADFVLMWDDAYRFHHLGDTPHTTPNVIEACAAAGHPDRAIVFASLSKVT HHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHEE LAGAGVAFLAASPRNVEWWARHAGARSIGPDKLNQLRHVHALRDRAGVEALMARHRALLR EECCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKFEAVEAAFAARLSGLPGVAWTRPQGGYFVSLQVPPGHAKRVVALAAAAGLVLTPAGAA CHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHCCEEEECCCCC YPYGDDADDRHLRIAPSFPSLEAVRLAANGISVSVRRALELD CCCCCCCCCCEEEEECCCCCHHHHEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA