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The map label for this gene is opuCB [H]

Identifier: 238025061

GI number: 238025061

Start: 2155590

End: 2156243

Strand: Reverse

Name: opuCB [H]

Synonym: bglu_2g17170

Alternate gene names: 238025061

Gene position: 2156243-2155590 (Counterclockwise)

Preceding gene: 238025062

Following gene: 238025060

Centisome position: 76.26

GC content: 67.74

Gene sequence:

>654_bases
ATGACCGTCCAAGCCTATCTGGCCGCCAACTGGCCCGAACTGCTCCAGCTCACGCTGCAGCACATCTATCTCGTCGGCAT
CGCGGTGGGCTGTGCGATCGTCGCCGGCGTGCCGCTCGGCATCGTGATCAGCCGCCACGAATGGCTCGCGCCGCCGCTGC
TCGGCATCGCCACCGTGATCCTCACGCTGCCCTCGATCGCGCTGTTCGGCCTGATGATCCCGATCTTCTCCCGCTTCGGG
CAGGGCATCGGCGCGGTGCCCGCGATCACCGCCGTGTTCCTGTATTCGCTGCTGCCGATCATGCGCAACACCTATCTGGC
GCTGCGCAACGTCGACGCCGGCATCAAGGAGGCGGGCATCGGCATCGGCATGACCTCGTGGCAGCGGCTGCGGCTCGTGG
AGCTGCCGCTCGCGGTGCCGGTGATCCTCGGCGGCGTGCGCACGGCGGTGGTGATGAACATCGGCGTGATGACCATCGCG
GCCGTGATCGGCGCGGGCGGCCTCGGCTCGCTGATCGTCCGCGCGATCGGCCAGAGCAGCATGATGAAGCTGCTGGTGGG
CGCGGTGCTCGTGAGCGTGCTCGCGATCGTCGCGGATCTGCTGCTGCAGGCGCTGCAGCGCGCATTGACACCGAAGGGAG
TGCAGAAGACATGA

Upstream 100 bases:

>100_bases
CTGGACATGAACAAGCGGGTGGATATCGACGGCGCCTCGGTGCAGCAGGTGGCGGCCGATTTCCTGCGCACGCATCCGTT
ACCGTGACCGGGAGACGACC

Downstream 100 bases:

>100_bases
TCGAACTCGACCAACTGACGAAGAGCTTCGCGCAGAAGGACGGCCAGCCGGTGCGCGCCGTCGATTCCGTGAGCCTGACG
GTGCCGGAAGGCGAAATCTG

Product: glycine betaine/L-proline ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTVQAYLAANWPELLQLTLQHIYLVGIAVGCAIVAGVPLGIVISRHEWLAPPLLGIATVILTLPSIALFGLMIPIFSRFG
QGIGAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGIGMTSWQRLRLVELPLAVPVILGGVRTAVVMNIGVMTIA
AVIGAGGLGSLIVRAIGQSSMMKLLVGAVLVSVLAIVADLLLQALQRALTPKGVQKT

Sequences:

>Translated_217_residues
MTVQAYLAANWPELLQLTLQHIYLVGIAVGCAIVAGVPLGIVISRHEWLAPPLLGIATVILTLPSIALFGLMIPIFSRFG
QGIGAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGIGMTSWQRLRLVELPLAVPVILGGVRTAVVMNIGVMTIA
AVIGAGGLGSLIVRAIGQSSMMKLLVGAVLVSVLAIVADLLLQALQRALTPKGVQKT
>Mature_216_residues
TVQAYLAANWPELLQLTLQHIYLVGIAVGCAIVAGVPLGIVISRHEWLAPPLLGIATVILTLPSIALFGLMIPIFSRFGQ
GIGAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGIGIGMTSWQRLRLVELPLAVPVILGGVRTAVVMNIGVMTIAA
VIGAGGLGSLIVRAIGQSSMMKLLVGAVLVSVLAIVADLLLQALQRALTPKGVQKT

Specific function: Involved in a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine and choline; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788449, Length=197, Percent_Identity=40.6091370558376, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1788451, Length=197, Percent_Identity=37.5634517766497, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1789033, Length=185, Percent_Identity=35.1351351351351, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 22686; Mature: 22555

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS01072 SLH_DOMAIN ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQAYLAANWPELLQLTLQHIYLVGIAVGCAIVAGVPLGIVISRHEWLAPPLLGIATVI
CCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHCCCHHHHHHHHH
LTLPSIALFGLMIPIFSRFGQGIGAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
GIGMTSWQRLRLVELPLAVPVILGGVRTAVVMNIGVMTIAAVIGAGGLGSLIVRAIGQSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHH
MMKLLVGAVLVSVLAIVADLLLQALQRALTPKGVQKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TVQAYLAANWPELLQLTLQHIYLVGIAVGCAIVAGVPLGIVISRHEWLAPPLLGIATVI
CEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHCCCHHHHHHHHH
LTLPSIALFGLMIPIFSRFGQGIGAVPAITAVFLYSLLPIMRNTYLALRNVDAGIKEAGI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
GIGMTSWQRLRLVELPLAVPVILGGVRTAVVMNIGVMTIAAVIGAGGLGSLIVRAIGQSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHH
MMKLLVGAVLVSVLAIVADLLLQALQRALTPKGVQKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]