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The map label for this gene is osmF [H]

Identifier: 238025062

GI number: 238025062

Start: 2156257

End: 2157219

Strand: Reverse

Name: osmF [H]

Synonym: bglu_2g17180

Alternate gene names: 238025062

Gene position: 2157219-2156257 (Counterclockwise)

Preceding gene: 238025063

Following gene: 238025061

Centisome position: 76.3

GC content: 68.43

Gene sequence:

>963_bases
ATGAGCGTCGCGCAATTCGCCCGCGCCGTCCGGGCTGCCGGTGCCGCGCTGGCACGCCGCTGCGCGGCCGCCGTCGCGCT
GGTGCCGATCGTCTCGCTGGCCTCGTTCGGCGCGCTCGCCACTGCGCCGGCTGCGGCGCAGTCCTTGACGGTGGGCGGCA
AGAACTTCACCGAGCAGTACGTGCTGGCCGAGATCACCTCGCAATACCTGCGCTCGCGCGGCTACACCATCGAAACCCGC
ACGGGCCTCGGCAGCGTGCTGCTGCGCAGCGCGTTCGTGAACGGCCAGATCGACCTGATGTGGGATTACACGGGCACCGC
CGCCCTCGTCTACGACAAGATCAAGGACAAGCTCTCGCCCGACGAGATGTACCGGCGCGTGAAGGAGATCGACGCCAGGC
GGGGGCTGGTGTGGCTCGACGCGTCCCCGCTCAACAACACCTACGCGCTGGCGCTGCCCGCCGAGGCCGCGAAGCGGACC
GGCATCCGCACCATCTCGCAGCTGGCCGCGAAGATCGCGAGCGACCCCAAGGGAACGCGCCACACGTTCGGGATGGACGC
GGAATTCGCCAATCGCCCCGACGGCCTGAAGCCGCTGGAAGCCGCCTATCATCTGCAATTCCGCCGCTCGGAGATCCGCC
AGATGGATGCCGGGCTGGTCTACACGGCGCTGCACAACGACCAGCTGACGATCGGCCTCGTCTACACCACGGACGGCCGC
GTGCGCGGCTTCGGCATCGTGCCGCTCGAGGACGACCTGCACTTTTTCCCGCCCTACAACGCCACGCCGGTGGTGCGCGC
GGAGGTGCTCCAGCGCAATCCGAAGCTCGCCGCGCAGCTCAACGCGCTGTCGGCCGCGCTCAACAACGACGTGATGCTGG
ACATGAACAAGCGGGTGGATATCGACGGCGCCTCGGTGCAGCAGGTGGCGGCCGATTTCCTGCGCACGCATCCGTTACCG
TGA

Upstream 100 bases:

>100_bases
TGCTGCTCGGCGCCGCCGCCACGGCGGTGCTCGCGCTGCTGCTCGACGGCATCGTCGCGGCCGGCAGCCGCCACGTGCTG
GCCCGCAATGGAGGTGCCGC

Downstream 100 bases:

>100_bases
CCGGGAGACGACCATGACCGTCCAAGCCTATCTGGCCGCCAACTGGCCCGAACTGCTCCAGCTCACGCTGCAGCACATCT
ATCTCGTCGGCATCGCGGTG

Product: glycine betaine/choline/proline family ABC transporter periplasmic ligand binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSVAQFARAVRAAGAALARRCAAAVALVPIVSLASFGALATAPAAAQSLTVGGKNFTEQYVLAEITSQYLRSRGYTIETR
TGLGSVLLRSAFVNGQIDLMWDYTGTAALVYDKIKDKLSPDEMYRRVKEIDARRGLVWLDASPLNNTYALALPAEAAKRT
GIRTISQLAAKIASDPKGTRHTFGMDAEFANRPDGLKPLEAAYHLQFRRSEIRQMDAGLVYTALHNDQLTIGLVYTTDGR
VRGFGIVPLEDDLHFFPPYNATPVVRAEVLQRNPKLAAQLNALSAALNNDVMLDMNKRVDIDGASVQQVAADFLRTHPLP

Sequences:

>Translated_320_residues
MSVAQFARAVRAAGAALARRCAAAVALVPIVSLASFGALATAPAAAQSLTVGGKNFTEQYVLAEITSQYLRSRGYTIETR
TGLGSVLLRSAFVNGQIDLMWDYTGTAALVYDKIKDKLSPDEMYRRVKEIDARRGLVWLDASPLNNTYALALPAEAAKRT
GIRTISQLAAKIASDPKGTRHTFGMDAEFANRPDGLKPLEAAYHLQFRRSEIRQMDAGLVYTALHNDQLTIGLVYTTDGR
VRGFGIVPLEDDLHFFPPYNATPVVRAEVLQRNPKLAAQLNALSAALNNDVMLDMNKRVDIDGASVQQVAADFLRTHPLP
>Mature_319_residues
SVAQFARAVRAAGAALARRCAAAVALVPIVSLASFGALATAPAAAQSLTVGGKNFTEQYVLAEITSQYLRSRGYTIETRT
GLGSVLLRSAFVNGQIDLMWDYTGTAALVYDKIKDKLSPDEMYRRVKEIDARRGLVWLDASPLNNTYALALPAEAAKRTG
IRTISQLAAKIASDPKGTRHTFGMDAEFANRPDGLKPLEAAYHLQFRRSEIRQMDAGLVYTALHNDQLTIGLVYTTDGRV
RGFGIVPLEDDLHFFPPYNATPVVRAEVLQRNPKLAAQLNALSAALNNDVMLDMNKRVDIDGASVQQVAADFLRTHPLP

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=293, Percent_Identity=27.6450511945392, Blast_Score=120, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34817; Mature: 34686

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAQFARAVRAAGAALARRCAAAVALVPIVSLASFGALATAPAAAQSLTVGGKNFTEQY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHEEECCCCCHHHHH
VLAEITSQYLRSRGYTIETRTGLGSVLLRSAFVNGQIDLMWDYTGTAALVYDKIKDKLSP
HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCH
DEMYRRVKEIDARRGLVWLDASPLNNTYALALPAEAAKRTGIRTISQLAAKIASDPKGTR
HHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC
HTFGMDAEFANRPDGLKPLEAAYHLQFRRSEIRQMDAGLVYTALHNDQLTIGLVYTTDGR
EECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEECCCC
VRGFGIVPLEDDLHFFPPYNATPVVRAEVLQRNPKLAAQLNALSAALNNDVMLDMNKRVD
EEEEEEEEECCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCEEC
IDGASVQQVAADFLRTHPLP
CCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVAQFARAVRAAGAALARRCAAAVALVPIVSLASFGALATAPAAAQSLTVGGKNFTEQY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHEEECCCCCHHHHH
VLAEITSQYLRSRGYTIETRTGLGSVLLRSAFVNGQIDLMWDYTGTAALVYDKIKDKLSP
HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCH
DEMYRRVKEIDARRGLVWLDASPLNNTYALALPAEAAKRTGIRTISQLAAKIASDPKGTR
HHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC
HTFGMDAEFANRPDGLKPLEAAYHLQFRRSEIRQMDAGLVYTALHNDQLTIGLVYTTDGR
EECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEECCCC
VRGFGIVPLEDDLHFFPPYNATPVVRAEVLQRNPKLAAQLNALSAALNNDVMLDMNKRVD
EEEEEEEEECCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCEEC
IDGASVQQVAADFLRTHPLP
CCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]