The gene/protein map for NC_012721 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is hit [H]

Identifier: 238025049

GI number: 238025049

Start: 2141211

End: 2141630

Strand: Reverse

Name: hit [H]

Synonym: bglu_2g17060

Alternate gene names: 238025049

Gene position: 2141630-2141211 (Counterclockwise)

Preceding gene: 238025050

Following gene: 238025047

Centisome position: 75.75

GC content: 67.38

Gene sequence:

>420_bases
ATGGCTTACGACGACAACAACATCTTCGCGAAGATCCTGCGCGGCGAACTGCCCTGCACGAAGGTCTGCGAGACCGATAC
GACGATCGCGTTCATGGACATCATGCCCCAGTCGCCCGGGCACGTGCTGATCGTGCCGAAGGAAGCGGCGGTGATGCTCT
ACGAGCTGTCCGACGAGGCGGCCGCCGAATGCATCCGCATGAGCAAGCGCGTGGCGCTCGCGATCCGCGAGGCGCTGCAG
CCGGACGGCCTGTTCGTCGGCCAGTTCAACGGCGAGGCGGCCGGGCAGACGGTGCCGCACGTCCATTTCCACCTGATCCC
GCGCTGGGCCACTCAGCCGCTCGGCGCGCACTCGCGCGAGGTGGCCGATCCCGCCGAACTGACGGCGATGGCCGAGCGAA
TCCGCGCGGCGCTGAAGTAA

Upstream 100 bases:

>100_bases
AGGCCCGCCGCCGCTTGCGGGCCGCTCGTGCTTGCGTGTTGGCGCGCGAGCCCCGAGAATCGTCGTTCCTTTCAACCGAA
CCCAGACGACGAGCGACCTC

Downstream 100 bases:

>100_bases
GCCGCCGCGGCCGGGCGCGCCGCGGCCGCGCATGGCCGTCGCGCGTGCGCCGGCCGCGCCCGGTTCGTGCTCAGGCGGGC
TGGCGCGGCCGACCGCCGCC

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAYDDNNIFAKILRGELPCTKVCETDTTIAFMDIMPQSPGHVLIVPKEAAVMLYELSDEAAAECIRMSKRVALAIREALQ
PDGLFVGQFNGEAAGQTVPHVHFHLIPRWATQPLGAHSREVADPAELTAMAERIRAALK

Sequences:

>Translated_139_residues
MAYDDNNIFAKILRGELPCTKVCETDTTIAFMDIMPQSPGHVLIVPKEAAVMLYELSDEAAAECIRMSKRVALAIREALQ
PDGLFVGQFNGEAAGQTVPHVHFHLIPRWATQPLGAHSREVADPAELTAMAERIRAALK
>Mature_138_residues
AYDDNNIFAKILRGELPCTKVCETDTTIAFMDIMPQSPGHVLIVPKEAAVMLYELSDEAAAECIRMSKRVALAIREALQP
DGLFVGQFNGEAAGQTVPHVHFHLIPRWATQPLGAHSREVADPAELTAMAERIRAALK

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17506713, Length=102, Percent_Identity=31.3725490196078, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320078, Length=101, Percent_Identity=42.5742574257426, Blast_Score=86, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24581222, Length=106, Percent_Identity=33.9622641509434, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574010, Length=106, Percent_Identity=33.9622641509434, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15239; Mature: 15108

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDDNNIFAKILRGELPCTKVCETDTTIAFMDIMPQSPGHVLIVPKEAAVMLYELSDEA
CCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCHH
AAECIRMSKRVALAIREALQPDGLFVGQFNGEAAGQTVPHVHFHLIPRWATQPLGAHSRE
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
VADPAELTAMAERIRAALK
CCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AYDDNNIFAKILRGELPCTKVCETDTTIAFMDIMPQSPGHVLIVPKEAAVMLYELSDEA
CCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCHH
AAECIRMSKRVALAIREALQPDGLFVGQFNGEAAGQTVPHVHFHLIPRWATQPLGAHSRE
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
VADPAELTAMAERIRAALK
CCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]