| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is xlnD [H]
Identifier: 238025032
GI number: 238025032
Start: 2116739
End: 2117953
Strand: Reverse
Name: xlnD [H]
Synonym: bglu_2g16890
Alternate gene names: 238025032
Gene position: 2117953-2116739 (Counterclockwise)
Preceding gene: 339717976
Following gene: 238025031
Centisome position: 74.91
GC content: 67.9
Gene sequence:
>1215_bases ATGACGCAGGACTGGAAAATCGCGATCGTCGGCGCCGGAATCGGCGGGCTGACGCTGGCCATCGCCTTGCGCGAGCACGG TATCGACGCCGATATTTACGAGCAGACGGACGAACTGCGGGAGGTCGGCGCGGCGGTCGCCTTGTCCTCGAATGCGACAC GCTTCTACGACCACATGGGATTGCGTCCGGCCTTCGACGGCATCTGCGCCGAGATTCCGGCGCTGGTGTTCCGGGACGGA CGCAGCGGCGCCGTGATCGGCCACCATCGAGGCAGCCCCGACTATCGCCGCGAATTCGGCGGCTCGTACTGGGGCGTCCA TCGTGCCGATCTGCAAGCAGTCCTGTCGAGCGCGGTCGGTCTCGACCGCATCCATCTCGGCTGCCGCCTGGCCGGCATCG CGCAGCAGGCGGATCACGTCAGCCTGACGTTCGAAAACGGCCGGCATGTCGACGCGGAGCTCGTCATCGGCGCAGACGGC GCCCGTTCGCTGACGCGCCGCTGGATGCTGGGCTACGACGACGTGCTCTATTCGGGATGTTCGGGCTTTCGCGGCATCGT GCCCGCCGATCTGCTCGACCGCCTGCCCACACCGGAAGCGATCCAGTTCTGGGTCGGAGCGGGCGGGCATCTGCTGCACT ATCCCATTGGCGACCGCGGCGACCAGAACTTCCTTCTGGTGGAGCGGCACCCGTCGCCCTGGCCGAGCCGGGAATGGATC ATGCCGGCCCGGGAAGGCGAGCAGTTCGCCCGCTTCAGCGACTGGCACCCGGCGGTGACGCAGATGATAACGGCCGTGCC GATCAGCCAGCGCTGGGGGCTCTTCCATCGTCCGCCGCTGGGCAAGTGGAGCCAGGGGCGGGTGACGCTGATCGGCGACG CGGCGCACGCGCTGGTCCCGCATCATGGACAGGGGGCCAACCAGTCCATCGAGGACGCCATGGTGCTGGCCGAGCAACTG GCCAGGTCGGGGCCCGGGAACTGGCGGGAAGCGCAGGCCGCCTACGAGCGACTCAGACGTGGGCGTACCCGCAAGGTTCA GTACGCGTCGATTACCGCTGCGGACGTGCTGCATCTGCCCGACGGCCCGGCCGCGGAGGCGCGCAATGCCCGCCTCCGCG ATCGTGACCGCGTGTTCCGGCATCTCGACTGGATTCACGATTTCGACGCGCTGAAGCAGGAGCCCAGCGATCGCCAAGGA GGGACCTGGCTTTAA
Upstream 100 bases:
>100_bases GAACCCTGGTCACACAATAGCCGCACGGTGCAGACACCGGGCGAGGCCTCCCACGCGCACGGCATCGCCTCGAACCACGC AAGTCAGACGGAGACACCCC
Downstream 100 bases:
>100_bases CGGCACCCGGATCGTCACGCGCCCGGCATACCCATGACGGACGTGCCAATGCGTGCCAATGCGTACCAATTCGTGGCAAG ACGGTTTCGTGCACGGCCGA
Product: Salicylate 1-monooxygenase
Products: NA
Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTQDWKIAIVGAGIGGLTLAIALREHGIDADIYEQTDELREVGAAVALSSNATRFYDHMGLRPAFDGICAEIPALVFRDG RSGAVIGHHRGSPDYRREFGGSYWGVHRADLQAVLSSAVGLDRIHLGCRLAGIAQQADHVSLTFENGRHVDAELVIGADG ARSLTRRWMLGYDDVLYSGCSGFRGIVPADLLDRLPTPEAIQFWVGAGGHLLHYPIGDRGDQNFLLVERHPSPWPSREWI MPAREGEQFARFSDWHPAVTQMITAVPISQRWGLFHRPPLGKWSQGRVTLIGDAAHALVPHHGQGANQSIEDAMVLAEQL ARSGPGNWREAQAAYERLRRGRTRKVQYASITAADVLHLPDGPAAEARNARLRDRDRVFRHLDWIHDFDALKQEPSDRQG GTWL
Sequences:
>Translated_404_residues MTQDWKIAIVGAGIGGLTLAIALREHGIDADIYEQTDELREVGAAVALSSNATRFYDHMGLRPAFDGICAEIPALVFRDG RSGAVIGHHRGSPDYRREFGGSYWGVHRADLQAVLSSAVGLDRIHLGCRLAGIAQQADHVSLTFENGRHVDAELVIGADG ARSLTRRWMLGYDDVLYSGCSGFRGIVPADLLDRLPTPEAIQFWVGAGGHLLHYPIGDRGDQNFLLVERHPSPWPSREWI MPAREGEQFARFSDWHPAVTQMITAVPISQRWGLFHRPPLGKWSQGRVTLIGDAAHALVPHHGQGANQSIEDAMVLAEQL ARSGPGNWREAQAAYERLRRGRTRKVQYASITAADVLHLPDGPAAEARNARLRDRDRVFRHLDWIHDFDALKQEPSDRQG GTWL >Mature_403_residues TQDWKIAIVGAGIGGLTLAIALREHGIDADIYEQTDELREVGAAVALSSNATRFYDHMGLRPAFDGICAEIPALVFRDGR SGAVIGHHRGSPDYRREFGGSYWGVHRADLQAVLSSAVGLDRIHLGCRLAGIAQQADHVSLTFENGRHVDAELVIGADGA RSLTRRWMLGYDDVLYSGCSGFRGIVPADLLDRLPTPEAIQFWVGAGGHLLHYPIGDRGDQNFLLVERHPSPWPSREWIM PAREGEQFARFSDWHPAVTQMITAVPISQRWGLFHRPPLGKWSQGRVTLIGDAAHALVPHHGQGANQSIEDAMVLAEQLA RSGPGNWREAQAAYERLRRGRTRKVQYASITAADVLHLPDGPAAEARNARLRDRDRVFRHLDWIHDFDALKQEPSDRQGG TWL
Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.24 [H]
Molecular weight: Translated: 44743; Mature: 44612
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDWKIAIVGAGIGGLTLAIALREHGIDADIYEQTDELREVGAAVALSSNATRFYDHMG CCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHCC LRPAFDGICAEIPALVFRDGRSGAVIGHHRGSPDYRREFGGSYWGVHRADLQAVLSSAVG CCHHHHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCC LDRIHLGCRLAGIAQQADHVSLTFENGRHVDAELVIGADGARSLTRRWMLGYDDVLYSGC HHHHHHCEEEHHHHCCCCEEEEEECCCCEECEEEEEECCCHHHHHHHHHCCHHHHHHHCC SGFRGIVPADLLDRLPTPEAIQFWVGAGGHLLHYPIGDRGDQNFLLVERHPSPWPSREWI CCCCCCCCHHHHHHCCCCHHHEEEECCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCC MPAREGEQFARFSDWHPAVTQMITAVPISQRWGLFHRPPLGKWSQGRVTLIGDAAHALVP CCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCC HHGQGANQSIEDAMVLAEQLARSGPGNWREAQAAYERLRRGRTRKVQYASITAADVLHLP CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHEEECC DGPAAEARNARLRDRDRVFRHLDWIHDFDALKQEPSDRQGGTWL CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TQDWKIAIVGAGIGGLTLAIALREHGIDADIYEQTDELREVGAAVALSSNATRFYDHMG CCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHCC LRPAFDGICAEIPALVFRDGRSGAVIGHHRGSPDYRREFGGSYWGVHRADLQAVLSSAVG CCHHHHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCC LDRIHLGCRLAGIAQQADHVSLTFENGRHVDAELVIGADGARSLTRRWMLGYDDVLYSGC HHHHHHCEEEHHHHCCCCEEEEEECCCCEECEEEEEECCCHHHHHHHHHCCHHHHHHHCC SGFRGIVPADLLDRLPTPEAIQFWVGAGGHLLHYPIGDRGDQNFLLVERHPSPWPSREWI CCCCCCCCHHHHHHCCCCHHHEEEECCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCC MPAREGEQFARFSDWHPAVTQMITAVPISQRWGLFHRPPLGKWSQGRVTLIGDAAHALVP CCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCC HHGQGANQSIEDAMVLAEQLARSGPGNWREAQAAYERLRRGRTRKVQYASITAADVLHLP CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHEEECC DGPAAEARNARLRDRDRVFRHLDWIHDFDALKQEPSDRQGGTWL CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12909360 [H]