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The map label for this gene is ydiK [C]

Identifier: 238025001

GI number: 238025001

Start: 2084225

End: 2085319

Strand: Direct

Name: ydiK [C]

Synonym: bglu_2g16580

Alternate gene names: 238025001

Gene position: 2084225-2085319 (Clockwise)

Preceding gene: 238025000

Following gene: 238025015

Centisome position: 73.72

GC content: 65.84

Gene sequence:

>1095_bases
GTGCCGGCGCGGGTTCCTCACCTGCCGTTCGGGCGCCACATGGAAAGCGCGAAAGACCATCAAAAATTCTTCCAGTTCCT
GCTGACCGTCGTGACGATCGGCTTCTGCTGGATTCTGATTCCATTCTTCGGCGCGATCTTCTGGGGCACGATACTCGCCA
TCCTGTTCCAGCCCGTGCAGCGCTGGCTCGCGGCGCACTTCGGCAAGCGCCGCAACCTCGCCGCGCTCGTCACGCTCTCG
GCGATCGTGCTGATCGTGATCCTGCCGCTGACGTTCGTGGCCGCCACGCTGGTGCAGGAAATCGCCTACGTGTACCAGCA
GGTCAAGACCTCGCAGCCGAACATGACGCTCTATCTGCAGCAGGTCGTGCATGCGCTGCCGACCTCGCTGCAGCGCGTGC
TGCACAGCTACGGGCTGGCCGACATCGCCGGCATCCAGAAGAAGCTGACCGACGGCGCGGCGGCGATCAGCCAGTTCGTG
GCCACGCAGGCGTTCAGCATCGGCCAGAACACGTTCCAGTTCGTGGTCAGCTTCGGCGTCATGCTCTATCTGGTGTTCTT
CCTGCTGCGCGACGGCGGCGAGATCGGCCGCCGTGTACGCCGCGCGCTGCCGCTCGACGAGGACCACAAGCACCTGCTGC
TGAGCAAGTTCACGACGGTGGTGCGCGCCACCGTGAAGGGCAACATCGCCGTCGCGCTCGTGCAGGGCGCGCTGGGCGGC
GTGATCTTCTGGATTCTCGGCATCGAGGGTGCGCTGCTGTGGGGCTCGCTGATGGCGTTCCTGTCGCTGCTGCCGGCGAT
CGGCGCGGGGCTCGTGTGGGCGCCGGCCGCGGTCTATTTCGCGGTGACCGGCCAGATCTGGAAATGCGTGATCCTGGTCG
TGTTCTGCGTCGGCGTGATCGGCCTCGTCGACAACCTGCTGCGCCCGATCCTGGTCGGCAAGGACACCAAGATGCCGGAC
TGGGTCGTGCTGATCTCGACGCTCGGCGGCATGGCGCTGTTCGGCATCAACGGCTTCGTGATCGGGCCGCTGGTGGCCGC
GCTGTTCATGGCGAGCTGGGATATCTTCGCGCGCGCCGATCAGGCCGGCGGCTGA

Upstream 100 bases:

>100_bases
TTGCCCGCGCGCGGCGCGGCCCCGGCGCCGCTACCCTCGCGCCGCGGTTGCAGGCATACTCACGTCACTCCCATACCCAT
CGGGACGCGCGCCCGGCCTG

Downstream 100 bases:

>100_bases
CGGCCGGCGACCCGCCGCGGCCCTCGCCGTGGCGCCTGCGCGGCCGTGCGCACGGCCTGTCGAACGAACGGCCCGCCGCA
CCCGCCACGCGCGAAGGCGC

Product: PerM family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MPARVPHLPFGRHMESAKDHQKFFQFLLTVVTIGFCWILIPFFGAIFWGTILAILFQPVQRWLAAHFGKRRNLAALVTLS
AIVLIVILPLTFVAATLVQEIAYVYQQVKTSQPNMTLYLQQVVHALPTSLQRVLHSYGLADIAGIQKKLTDGAAAISQFV
ATQAFSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEDHKHLLLSKFTTVVRATVKGNIAVALVQGALGG
VIFWILGIEGALLWGSLMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVVFCVGVIGLVDNLLRPILVGKDTKMPD
WVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARADQAGG

Sequences:

>Translated_364_residues
MPARVPHLPFGRHMESAKDHQKFFQFLLTVVTIGFCWILIPFFGAIFWGTILAILFQPVQRWLAAHFGKRRNLAALVTLS
AIVLIVILPLTFVAATLVQEIAYVYQQVKTSQPNMTLYLQQVVHALPTSLQRVLHSYGLADIAGIQKKLTDGAAAISQFV
ATQAFSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEDHKHLLLSKFTTVVRATVKGNIAVALVQGALGG
VIFWILGIEGALLWGSLMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVVFCVGVIGLVDNLLRPILVGKDTKMPD
WVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARADQAGG
>Mature_363_residues
PARVPHLPFGRHMESAKDHQKFFQFLLTVVTIGFCWILIPFFGAIFWGTILAILFQPVQRWLAAHFGKRRNLAALVTLSA
IVLIVILPLTFVAATLVQEIAYVYQQVKTSQPNMTLYLQQVVHALPTSLQRVLHSYGLADIAGIQKKLTDGAAAISQFVA
TQAFSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEDHKHLLLSKFTTVVRATVKGNIAVALVQGALGGV
IFWILGIEGALLWGSLMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVVFCVGVIGLVDNLLRPILVGKDTKMPDW
VVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARADQAGG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=357, Percent_Identity=27.7310924369748, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39688; Mature: 39557

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARVPHLPFGRHMESAKDHQKFFQFLLTVVTIGFCWILIPFFGAIFWGTILAILFQPVQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWLAAHFGKRRNLAALVTLSAIVLIVILPLTFVAATLVQEIAYVYQQVKTSQPNMTLYLQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QVVHALPTSLQRVLHSYGLADIAGIQKKLTDGAAAISQFVATQAFSIGQNTFQFVVSFGV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLYLVFFLLRDGGEIGRRVRRALPLDEDHKHLLLSKFTTVVRATVKGNIAVALVQGALGG
HHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VIFWILGIEGALLWGSLMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVVFCVGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARAD
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
QAGG
CCCC
>Mature Secondary Structure 
PARVPHLPFGRHMESAKDHQKFFQFLLTVVTIGFCWILIPFFGAIFWGTILAILFQPVQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWLAAHFGKRRNLAALVTLSAIVLIVILPLTFVAATLVQEIAYVYQQVKTSQPNMTLYLQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QVVHALPTSLQRVLHSYGLADIAGIQKKLTDGAAAISQFVATQAFSIGQNTFQFVVSFGV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLYLVFFLLRDGGEIGRRVRRALPLDEDHKHLLLSKFTTVVRATVKGNIAVALVQGALGG
HHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VIFWILGIEGALLWGSLMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVVFCVGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARAD
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
QAGG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]