| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025000
Identifier: 238025000
GI number: 238025000
Start: 2083490
End: 2084077
Strand: Direct
Name: 238025000
Synonym: bglu_2g16570
Alternate gene names: NA
Gene position: 2083490-2084077 (Clockwise)
Preceding gene: 238024999
Following gene: 238025001
Centisome position: 73.69
GC content: 67.52
Gene sequence:
>588_bases ATGCGTCAAGCATTTGTGATGAAGGCCGCGGCCGCCCTGGTAGTCGGCAGCCTCGCCCTGACCGGCTGCACCACCACGCC GCCGAACGAAAAGTCGACCGCCGCCGAGAACTCGTCGAAGCGTCAGGCGATCAACGCGAGCGTCGACGCAACGCTCTCGC GCCTGTACTCGACGGTGCCGGGCTCACGCGAGCTGGTCGCCAAGTCGCGCGGCGTGCTGGTGTTCCCGAGCGTGCTGCAG GCCGGCTTCATCGTCGGCGCCCAGACCGGCAACGGCGCCCTGCGCGTGGGCGGCAGCACGGTCGGCTACTACAACACCTC GTCGCTGTCGCTCGGCCTGCAGGCCGGCGCGCAATCGAAGGCGGTCATCTTCCTGTTCATGACGCAGGAAGCGCTCGACA AATTCCGCAGCACGGACGGCTGGTCGGCAGGCGCCGACGCGTCGGTGGCGGTCTTGAAGGTCGGCGCGAACGGCGCGATC GACTCGAATACGGTGCAGTCGCCGATCGAGGCCATCGTGCTGACCAACGCCGGCCTGATGGGCGACCTGTCGGTCAACGG CACCAAGGTCACGCGCATCAATCCGTAA
Upstream 100 bases:
>100_bases TCGCCGGGCTGGCCTTCATCGCCGGCCTGCTGCTCGCGCGGCGCTGATCCGCGGTCCCCGGCTTAGTACAAATCCCAACC TGCAACGAGGAGAAAAAACC
Downstream 100 bases:
>100_bases GCGGACTGCGCCTCGCAACGCCGCGGCTCACGCCGCGGCGTTTTTTATTGCCCGCGCGCGGCGCGGCCCCGGCGCCGCTA CCCTCGCGCCGCGGTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRQAFVMKAAAALVVGSLALTGCTTTPPNEKSTAAENSSKRQAINASVDATLSRLYSTVPGSRELVAKSRGVLVFPSVLQ AGFIVGAQTGNGALRVGGSTVGYYNTSSLSLGLQAGAQSKAVIFLFMTQEALDKFRSTDGWSAGADASVAVLKVGANGAI DSNTVQSPIEAIVLTNAGLMGDLSVNGTKVTRINP
Sequences:
>Translated_195_residues MRQAFVMKAAAALVVGSLALTGCTTTPPNEKSTAAENSSKRQAINASVDATLSRLYSTVPGSRELVAKSRGVLVFPSVLQ AGFIVGAQTGNGALRVGGSTVGYYNTSSLSLGLQAGAQSKAVIFLFMTQEALDKFRSTDGWSAGADASVAVLKVGANGAI DSNTVQSPIEAIVLTNAGLMGDLSVNGTKVTRINP >Mature_195_residues MRQAFVMKAAAALVVGSLALTGCTTTPPNEKSTAAENSSKRQAINASVDATLSRLYSTVPGSRELVAKSRGVLVFPSVLQ AGFIVGAQTGNGALRVGGSTVGYYNTSSLSLGLQAGAQSKAVIFLFMTQEALDKFRSTDGWSAGADASVAVLKVGANGAI DSNTVQSPIEAIVLTNAGLMGDLSVNGTKVTRINP
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19883; Mature: 19883
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQAFVMKAAAALVVGSLALTGCTTTPPNEKSTAAENSSKRQAINASVDATLSRLYSTVP CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC GSRELVAKSRGVLVFPSVLQAGFIVGAQTGNGALRVGGSTVGYYNTSSLSLGLQAGAQSK CCHHHHHCCCCEEEEHHHHHCCEEEEEECCCCEEEECCCEEEEEECCCEEEEECCCCCCC AVIFLFMTQEALDKFRSTDGWSAGADASVAVLKVGANGAIDSNTVQSPIEAIVLTNAGLM EEEEEEECHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHCHHEEEEEECCCEE GDLSVNGTKVTRINP EEEECCCEEEEEECC >Mature Secondary Structure MRQAFVMKAAAALVVGSLALTGCTTTPPNEKSTAAENSSKRQAINASVDATLSRLYSTVP CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC GSRELVAKSRGVLVFPSVLQAGFIVGAQTGNGALRVGGSTVGYYNTSSLSLGLQAGAQSK CCHHHHHCCCCEEEEHHHHHCCEEEEEECCCCEEEECCCEEEEEECCCEEEEECCCCCCC AVIFLFMTQEALDKFRSTDGWSAGADASVAVLKVGANGAIDSNTVQSPIEAIVLTNAGLM EEEEEEECHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHCHHEEEEEECCCEE GDLSVNGTKVTRINP EEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA