| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024970
Identifier: 238024970
GI number: 238024970
Start: 2049500
End: 2050288
Strand: Direct
Name: 238024970
Synonym: bglu_2g16270
Alternate gene names: NA
Gene position: 2049500-2050288 (Clockwise)
Preceding gene: 238024969
Following gene: 238024971
Centisome position: 72.49
GC content: 75.79
Gene sequence:
>789_bases GTGACCCTGTCCCACGCCGATCCCGCCGCCGCCCTGCTGCGCGAGCGCGCCGCCCGCTACGTCACGGAAAATGCGCTGTT CGCGCGCGAACAGGCGCTGTCGGTCGCCTCGCACGACCTGCGCAGCCCGCTCAACGCGATGCACAGCTGGGCCTACGTGC TCGAACGCCAGCTGCCGCCCGGCGACGGCTCGCTGCAGCGCGCGCTCGACGGCATCCGGATCGGCATCGAGCAGCAGACG AAGCTGATCGGCTCGGCGCTCGACGCGCCGCGCGCCGATACGCGCACGCTCGCGCTCGCCTACGAAAGCTGCCGACTGGC GCCGCTCGTCGACGAGGTCGCGGTGCTCGCGCGCCTCGCGCTCGGCGACGCACGCGGCGTGAACCTCGCGACCGCGCTGG AGGCGCCGCACGACGCGTCGCTGAACGCCGATCGCGAGCGGCTCGCGCAGACGCTGTGGTCGATGGCGGTGTTCGCGATC GAGGCCGGCGCGCCCGCTGCGCCCGTCACGCTCGCCTGCGATGCACGGCGCGCGGCCGACACGGTGAGCTTCGAGGCCAG CTTCACGGCAGCGCCGTCCGCGCTCGTGGCGCCCTCGCTGCCGCATGCGCTCGACAGCGGCGCGCGGCGCGAGGCGCTGC TCGAGCGCGACGCGCGCCGCCCGCCGTGGGCGCTCGCGCTGTGCCATCGCGTCGCGCTCGCGCACGGCGGCAGCTTCGCG CCGCCGGCGCTCGAGGCCGGCAGCACCGCGCGCATCGTGCTGACGCTGCCGCGCACGGCCTCGGTATGA
Upstream 100 bases:
>100_bases CGCGACTGCCGGCCTGAGGGCGGCTGGCGTCGGGCCGCGCGACGCGCTCGCCATACGGTCCCTATAATGGCGATTCCGCC ATCTTACTCACGCCCGCCTC
Downstream 100 bases:
>100_bases CGGTTTATCCGAACGGCGAAGTTTACGTTCGCCTTTCCGCCTCTATACTGACACTTCCCTTATTACCGGAGTCGTTGCGT TGATACAGATCATCGCGCTA
Product: Sensor histidine kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase; Two-Component Transcription Regulator And Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Signal Transduction Histidine Kinase; Sensor Histidine Kinase/Response Regulator
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTLSHADPAAALLRERAARYVTENALFAREQALSVASHDLRSPLNAMHSWAYVLERQLPPGDGSLQRALDGIRIGIEQQT KLIGSALDAPRADTRTLALAYESCRLAPLVDEVAVLARLALGDARGVNLATALEAPHDASLNADRERLAQTLWSMAVFAI EAGAPAAPVTLACDARRAADTVSFEASFTAAPSALVAPSLPHALDSGARREALLERDARRPPWALALCHRVALAHGGSFA PPALEAGSTARIVLTLPRTASV
Sequences:
>Translated_262_residues MTLSHADPAAALLRERAARYVTENALFAREQALSVASHDLRSPLNAMHSWAYVLERQLPPGDGSLQRALDGIRIGIEQQT KLIGSALDAPRADTRTLALAYESCRLAPLVDEVAVLARLALGDARGVNLATALEAPHDASLNADRERLAQTLWSMAVFAI EAGAPAAPVTLACDARRAADTVSFEASFTAAPSALVAPSLPHALDSGARREALLERDARRPPWALALCHRVALAHGGSFA PPALEAGSTARIVLTLPRTASV >Mature_261_residues TLSHADPAAALLRERAARYVTENALFAREQALSVASHDLRSPLNAMHSWAYVLERQLPPGDGSLQRALDGIRIGIEQQTK LIGSALDAPRADTRTLALAYESCRLAPLVDEVAVLARLALGDARGVNLATALEAPHDASLNADRERLAQTLWSMAVFAIE AGAPAAPVTLACDARRAADTVSFEASFTAAPSALVAPSLPHALDSGARREALLERDARRPPWALALCHRVALAHGGSFAP PALEAGSTARIVLTLPRTASV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27665; Mature: 27534
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSHADPAAALLRERAARYVTENALFAREQALSVASHDLRSPLNAMHSWAYVLERQLPP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GDGSLQRALDGIRIGIEQQTKLIGSALDAPRADTRTLALAYESCRLAPLVDEVAVLARLA CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHEEEHHHHCCCCHHHHHHHHHHHHH LGDARGVNLATALEAPHDASLNADRERLAQTLWSMAVFAIEAGAPAAPVTLACDARRAAD HCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH TVSFEASFTAAPSALVAPSLPHALDSGARREALLERDARRPPWALALCHRVALAHGGSFA HEEECCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC PPALEAGSTARIVLTLPRTASV CCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure TLSHADPAAALLRERAARYVTENALFAREQALSVASHDLRSPLNAMHSWAYVLERQLPP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GDGSLQRALDGIRIGIEQQTKLIGSALDAPRADTRTLALAYESCRLAPLVDEVAVLARLA CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHEEEHHHHCCCCHHHHHHHHHHHHH LGDARGVNLATALEAPHDASLNADRERLAQTLWSMAVFAIEAGAPAAPVTLACDARRAAD HCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH TVSFEASFTAAPSALVAPSLPHALDSGARREALLERDARRPPWALALCHRVALAHGGSFA HEEECCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC PPALEAGSTARIVLTLPRTASV CCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA