| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024969
Identifier: 238024969
GI number: 238024969
Start: 2048487
End: 2049416
Strand: Direct
Name: 238024969
Synonym: bglu_2g16260
Alternate gene names: NA
Gene position: 2048487-2049416 (Clockwise)
Preceding gene: 238024967
Following gene: 238024970
Centisome position: 72.45
GC content: 72.47
Gene sequence:
>930_bases ATGACGCCTGCCGCTCGCCAACACCTCCGCGCGAACCTGCTGATGCTCGGCGCCGCCGCGATCTGGGGCTCCGCCTTCGT CGCGCAACGGCTCAGCCTGGCGGTGATCGGCCCGTTCCTCTACACCGGCCTGCGCTTCCTGCTCGGCGCGCTGGTGCTGG TGCCGCTGCTGCTCGCGAAGGCGCCTGCGCGCGCGGAGCTCGCCGCGCTCGCGCGACGTCCGGCCGGGCTCGCGCCGGGG CTGCTGCTCGGCACGCTGCTGGCCGTGTCGATCTCGCTGCAGCAGATCGGCCTGCAATACACGAAGATCGCCAACGCCGG CTTCATCAGCTCGCTCTACGTCGTGCTGGTGCCGCTGATCGGCGTGCTGCTGCGGCACCGGGCCGGCTTCGGCACCTGGC TCGGCGCCACGCTGGCGGCCGTCGGCCTCTATTTTCTCAGCGTCGACGAGCATTTCACGGTGATGGTCGGCGACGGCTTC CAGCTCGCCTGCGCGGTGCTGATCGCCGTCCACGTGATCGCGGTCGGCCACTTCGCGCGGCGCCAGGAGCCGCTCGTGCT GGCGTTCCAGCAATTCGCGGTCTGCGGCCTGCTGTGCGGCGCGCTCGGCCTCGGCGTCGAAACGCTCGATGCGGCCACGC TGCAGCACGCGCTGCCCACCCTGCTCTACGGCGGCCTGCTGTCGGTGGGCGTCGGCTATACGCTGCAGGTGGTGGCGCAA CGCAAAGCGGCGCCCGCGCATGCGGCGGTGATCTTCAGCATGGAAGGCGTGTTCGCGGCGGTCGCCGGCTGGGCCGCGCT CGGCGAGACGCTGAGCCCGCGCGCGCTGATCGGCTGCGCGCTGATGCTGGCCGGCCTGCTCGCCTGCCAGTTGCTGCCGA ACCGCGCGGAGCACGCCGCCGGGCCAGACAGCCCGCGACTGCCGGCCTGA
Upstream 100 bases:
>100_bases GGCGCACGGCTTGGCGCCGATCCCCTTGCGCCGGTTTGCGGCGACCTTCACCGCTTGGGCATATACACTGTCATGCTTTC TACCCCGCTCCGATTTCCCG
Downstream 100 bases:
>100_bases GGGCGGCTGGCGTCGGGCCGCGCGACGCGCTCGCCATACGGTCCCTATAATGGCGATTCCGCCATCTTACTCACGCCCGC CTCGTGACCCTGTCCCACGC
Product: DMT family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTPAARQHLRANLLMLGAAAIWGSAFVAQRLSLAVIGPFLYTGLRFLLGALVLVPLLLAKAPARAELAALARRPAGLAPG LLLGTLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPLIGVLLRHRAGFGTWLGATLAAVGLYFLSVDEHFTVMVGDGF QLACAVLIAVHVIAVGHFARRQEPLVLAFQQFAVCGLLCGALGLGVETLDAATLQHALPTLLYGGLLSVGVGYTLQVVAQ RKAAPAHAAVIFSMEGVFAAVAGWAALGETLSPRALIGCALMLAGLLACQLLPNRAEHAAGPDSPRLPA
Sequences:
>Translated_309_residues MTPAARQHLRANLLMLGAAAIWGSAFVAQRLSLAVIGPFLYTGLRFLLGALVLVPLLLAKAPARAELAALARRPAGLAPG LLLGTLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPLIGVLLRHRAGFGTWLGATLAAVGLYFLSVDEHFTVMVGDGF QLACAVLIAVHVIAVGHFARRQEPLVLAFQQFAVCGLLCGALGLGVETLDAATLQHALPTLLYGGLLSVGVGYTLQVVAQ RKAAPAHAAVIFSMEGVFAAVAGWAALGETLSPRALIGCALMLAGLLACQLLPNRAEHAAGPDSPRLPA >Mature_308_residues TPAARQHLRANLLMLGAAAIWGSAFVAQRLSLAVIGPFLYTGLRFLLGALVLVPLLLAKAPARAELAALARRPAGLAPGL LLGTLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPLIGVLLRHRAGFGTWLGATLAAVGLYFLSVDEHFTVMVGDGFQ LACAVLIAVHVIAVGHFARRQEPLVLAFQQFAVCGLLCGALGLGVETLDAATLQHALPTLLYGGLLSVGVGYTLQVVAQR KAAPAHAAVIFSMEGVFAAVAGWAALGETLSPRALIGCALMLAGLLACQLLPNRAEHAAGPDSPRLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31983; Mature: 31851
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAARQHLRANLLMLGAAAIWGSAFVAQRLSLAVIGPFLYTGLRFLLGALVLVPLLLAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APARAELAALARRPAGLAPGLLLGTLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPLI CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHH GVLLRHRAGFGTWLGATLAAVGLYFLSVDEHFTVMVGDGFQLACAVLIAVHVIAVGHFAR HHHHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH RQEPLVLAFQQFAVCGLLCGALGLGVETLDAATLQHALPTLLYGGLLSVGVGYTLQVVAQ CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RKAAPAHAAVIFSMEGVFAAVAGWAALGETLSPRALIGCALMLAGLLACQLLPNRAEHAA HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCC GPDSPRLPA CCCCCCCCC >Mature Secondary Structure TPAARQHLRANLLMLGAAAIWGSAFVAQRLSLAVIGPFLYTGLRFLLGALVLVPLLLAK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APARAELAALARRPAGLAPGLLLGTLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPLI CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHH GVLLRHRAGFGTWLGATLAAVGLYFLSVDEHFTVMVGDGFQLACAVLIAVHVIAVGHFAR HHHHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH RQEPLVLAFQQFAVCGLLCGALGLGVETLDAATLQHALPTLLYGGLLSVGVGYTLQVVAQ CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RKAAPAHAAVIFSMEGVFAAVAGWAALGETLSPRALIGCALMLAGLLACQLLPNRAEHAA HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCC GPDSPRLPA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]