Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024967

Identifier: 238024967

GI number: 238024967

Start: 2045670

End: 2046365

Strand: Direct

Name: 238024967

Synonym: bglu_2g16240

Alternate gene names: NA

Gene position: 2045670-2046365 (Clockwise)

Preceding gene: 238024964

Following gene: 238024969

Centisome position: 72.35

GC content: 70.26

Gene sequence:

>696_bases
ATGTACGACCTGCCGCTTCGCCTCTGGAACTGGATCACCTACTTCGGCAGCGCCGGCATTACGCTGCCGCTCGCCGCGAC
GCTGGCCGTCTGGCTCGCGCTCGGCTATTCGGCGCGCCTCGCGCTGACCTGGCTCGCCGTGCTCGGCGCGGCAATTTCGG
CGGTCGCGCTGACCAAGATCGCGTTCCTCGGCTGGGGCATCGGCATCCGCACCTGGGATTTCACCGGCTTCAGCGGCCAT
TCGATGCTCTCCGCCTCGGTCTATCCGGTCGCGATGCTGATCGCGCTCACCCGTGCCCATCCCGTCCTGCGGGCCGCCGG
CGTCGCGCTCGGGCTGGCGCTCGGCGTGGCCGTGTCGCTGTCGCGCGTGGTGCTGTCGGCGCATTCGCCGTCCGAGGCGA
TCACCGGCTGCGTGGTCGGCGCGCTGGCGGCGCTGTCGTTCGTGCTGATCGCCTGGCGCGCGCAGCCCCATCGCTGGTCG
GTACCGGCCGTGGTGGCCAGCCTCGCGATCGTCACCATCACGCTGCACGGCATTCCGGTGCCGTCGCAACGCTGGGTCAC
CCAAGTGGCCCTGAAGGTGTCGGGCCACGAGCGCCCCTACGTGCGTGCGCGTTGGAAGGCGAACCCGAACTACCGGCCGA
TATCGCGGCCGACTTCCGCCACGCTCGACCAGAACGCCCCGCTGCATCGCATCTGA

Upstream 100 bases:

>100_bases
AGCCCGGTATACTGCTGCCAGCCGCCCGCCGTGCGCCACCGCCCTGCCCGGGCGGCATGCGCCGGCTCCGTTTCACGCCC
GACTGAGCCGCCGATTCCCG

Downstream 100 bases:

>100_bases
GCGGCGGCCTCGCCCGCGGCCGCCGCCCGTCCCGCTGGCGCCCTCCGGTCAGCGCTGCCCGCCACCCACGCCACGAATCT
TCGGCCGCCACAGGCGGCGC

Product: PAP2 family protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKIAFLGWGIGIRTWDFTGFSGH
SMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSLSRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWS
VPAVVASLAIVTITLHGIPVPSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI

Sequences:

>Translated_231_residues
MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKIAFLGWGIGIRTWDFTGFSGH
SMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSLSRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWS
VPAVVASLAIVTITLHGIPVPSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI
>Mature_231_residues
MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKIAFLGWGIGIRTWDFTGFSGH
SMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSLSRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWS
VPAVVASLAIVTITLHGIPVPSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 24696; Mature: 24696

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKI
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AFLGWGIGIRTWDFTGFSGHSMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSL
HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWSVPAVVASLAIVTITLHGIPV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCC
PSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKI
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AFLGWGIGIRTWDFTGFSGHSMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSL
HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWSVPAVVASLAIVTITLHGIPV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCC
PSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]