| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024967
Identifier: 238024967
GI number: 238024967
Start: 2045670
End: 2046365
Strand: Direct
Name: 238024967
Synonym: bglu_2g16240
Alternate gene names: NA
Gene position: 2045670-2046365 (Clockwise)
Preceding gene: 238024964
Following gene: 238024969
Centisome position: 72.35
GC content: 70.26
Gene sequence:
>696_bases ATGTACGACCTGCCGCTTCGCCTCTGGAACTGGATCACCTACTTCGGCAGCGCCGGCATTACGCTGCCGCTCGCCGCGAC GCTGGCCGTCTGGCTCGCGCTCGGCTATTCGGCGCGCCTCGCGCTGACCTGGCTCGCCGTGCTCGGCGCGGCAATTTCGG CGGTCGCGCTGACCAAGATCGCGTTCCTCGGCTGGGGCATCGGCATCCGCACCTGGGATTTCACCGGCTTCAGCGGCCAT TCGATGCTCTCCGCCTCGGTCTATCCGGTCGCGATGCTGATCGCGCTCACCCGTGCCCATCCCGTCCTGCGGGCCGCCGG CGTCGCGCTCGGGCTGGCGCTCGGCGTGGCCGTGTCGCTGTCGCGCGTGGTGCTGTCGGCGCATTCGCCGTCCGAGGCGA TCACCGGCTGCGTGGTCGGCGCGCTGGCGGCGCTGTCGTTCGTGCTGATCGCCTGGCGCGCGCAGCCCCATCGCTGGTCG GTACCGGCCGTGGTGGCCAGCCTCGCGATCGTCACCATCACGCTGCACGGCATTCCGGTGCCGTCGCAACGCTGGGTCAC CCAAGTGGCCCTGAAGGTGTCGGGCCACGAGCGCCCCTACGTGCGTGCGCGTTGGAAGGCGAACCCGAACTACCGGCCGA TATCGCGGCCGACTTCCGCCACGCTCGACCAGAACGCCCCGCTGCATCGCATCTGA
Upstream 100 bases:
>100_bases AGCCCGGTATACTGCTGCCAGCCGCCCGCCGTGCGCCACCGCCCTGCCCGGGCGGCATGCGCCGGCTCCGTTTCACGCCC GACTGAGCCGCCGATTCCCG
Downstream 100 bases:
>100_bases GCGGCGGCCTCGCCCGCGGCCGCCGCCCGTCCCGCTGGCGCCCTCCGGTCAGCGCTGCCCGCCACCCACGCCACGAATCT TCGGCCGCCACAGGCGGCGC
Product: PAP2 family protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKIAFLGWGIGIRTWDFTGFSGH SMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSLSRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWS VPAVVASLAIVTITLHGIPVPSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI
Sequences:
>Translated_231_residues MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKIAFLGWGIGIRTWDFTGFSGH SMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSLSRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWS VPAVVASLAIVTITLHGIPVPSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI >Mature_231_residues MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKIAFLGWGIGIRTWDFTGFSGH SMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSLSRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWS VPAVVASLAIVTITLHGIPVPSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: NA
Molecular weight: Translated: 24696; Mature: 24696
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AFLGWGIGIRTWDFTGFSGHSMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSL HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWSVPAVVASLAIVTITLHGIPV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCC PSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYDLPLRLWNWITYFGSAGITLPLAATLAVWLALGYSARLALTWLAVLGAAISAVALTKI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AFLGWGIGIRTWDFTGFSGHSMLSASVYPVAMLIALTRAHPVLRAAGVALGLALGVAVSL HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SRVVLSAHSPSEAITGCVVGALAALSFVLIAWRAQPHRWSVPAVVASLAIVTITLHGIPV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCC PSQRWVTQVALKVSGHERPYVRARWKANPNYRPISRPTSATLDQNAPLHRI CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]