| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is sseA [H]
Identifier: 238024943
GI number: 238024943
Start: 2018284
End: 2019153
Strand: Direct
Name: sseA [H]
Synonym: bglu_2g15980
Alternate gene names: 238024943
Gene position: 2018284-2019153 (Clockwise)
Preceding gene: 238024942
Following gene: 238024947
Centisome position: 71.38
GC content: 70.92
Gene sequence:
>870_bases ATGTCCCACACGCATTACACGACGCTCATCTCCGCCGACAATCTGGCGGAACGTCTCGCCGCCGCGCCGGACAGCCTGAT CGTGTTCGATTGCCGCTTCGACCTGACCGATCCCGACGCCGGCGCGCAAGCCTACGCGGCCGGCCATCTGCCCGGCGCGC GCTATCTGCACCTCGATCGCGATCTGTCCGGCCCGAAAACGGGCAGCAACGGCCGCCATCCGCTGCCCGCGCGCGAGACG CTGGTCGCCACGCTCGCCGCGAAGGGCCTGCGCGCGAACCAGCAGGTGGTAGCCTACGACGCCCAAGGCGGCATTTACGC GGCGCGGCTGTGGTGGCTGCTGCGCTGGCTCGGCCACGACTCGGTGGCGGTGCTCGACGGCGGCCTGCAGGCGTGGCAGG CGGCGGGCGGCACGCTCACGCGCGACATGCCGGCCGAACGCGCCGGCGATTTCCGCGCGCAACCGCCGCTCGCCACCGTG GTCGACGCGGCGGCCGTGGTCGCCAATCTGGCATCGAAAGCGCGGCTGGTGGTGGACGCGCGCGCCGCGGACCGCTACCG CGGCGAGAACGAGACGCTCGACCGCATCGGCGGCCACATCCCCGGCGCCGTGAACCGCTTCTTCAAGGACAATCTGAATC CGGAGGGCCGCTTCAAGAGCGGCCATCAACTGCGTGACGAATGGATCAGCGTGATCGGCGAGCAGCCCGCCAACAACGTG ATCCTGCAGTGCGGCTCGGGCGTGACGGCCTGCCATAACGCGCTGGCCATGGAGATCGCCGGGCTCCACAACCCGCTGCT CTACGCGGGCTCGTGGAGCGAATGGAGCGCGGACCCGTCGCGGCCGATCGCGACCGGCCCGACCCGCTGA
Upstream 100 bases:
>100_bases GGCCGGCATCGCGGCGGCACAATCCGCAAAAGACAGGCTTCGGCCTGTCTTTTTTTGTTTAGACTTGTTGGTTCCGGCCC GTTTCCCCGCAGGAGCTACC
Downstream 100 bases:
>100_bases TCCGCAGGCCCGGCGTCACATGACGCCGTACTTGTGGAACCACGCGAGCGCGCGCCTCCAGCCGTCCTCGGCATCGGCCT TCACGTAGCTCGGCCGGTAG
Product: Rhodanese domain-containing protein
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDRDLSGPKTGSNGRHPLPARET LVATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHDSVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATV VDAAAVVANLASKARLVVDARAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNV ILQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR
Sequences:
>Translated_289_residues MSHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDRDLSGPKTGSNGRHPLPARET LVATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHDSVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATV VDAAAVVANLASKARLVVDARAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNV ILQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR >Mature_288_residues SHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDRDLSGPKTGSNGRHPLPARETL VATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHDSVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATVV DAAAVVANLASKARLVVDARAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNVI LQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI61835204, Length=294, Percent_Identity=36.3945578231293, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI194473681, Length=294, Percent_Identity=36.3945578231293, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI194473668, Length=294, Percent_Identity=36.3945578231293, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI17402865, Length=296, Percent_Identity=32.0945945945946, Blast_Score=125, Evalue=4e-29, Organism=Escherichia coli, GI87082121, Length=247, Percent_Identity=32.7935222672065, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI87081967, Length=258, Percent_Identity=28.2945736434109, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17561888, Length=254, Percent_Identity=27.5590551181102, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71997283, Length=257, Percent_Identity=26.8482490272374, Blast_Score=86, Evalue=2e-17,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30966; Mature: 30835
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDR CCCCEEEEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCEEEEECC DLSGPKTGSNGRHPLPARETLVATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHD CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC SVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATVVDAAAVVANLASKARLVVDA CEEEECCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEC RAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNV HHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCE ILQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR EEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDR CCCEEEEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCEEEEECC DLSGPKTGSNGRHPLPARETLVATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHD CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC SVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATVVDAAAVVANLASKARLVVDA CEEEECCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEC RAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNV HHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCE ILQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR EEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]