| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yeaW [H]
Identifier: 238024942
GI number: 238024942
Start: 2017074
End: 2018180
Strand: Direct
Name: yeaW [H]
Synonym: bglu_2g15970
Alternate gene names: 238024942
Gene position: 2017074-2018180 (Clockwise)
Preceding gene: 238024937
Following gene: 238024943
Centisome position: 71.34
GC content: 62.24
Gene sequence:
>1107_bases ATGTCCAATCTGAGCGACGCGCTGCAGTTGAAGTCGGCATCCAGCCAGCTTCCAGTCACGGCTTATTTCGACGAGGCGCT TCTGGCGCGCGAAGTCGAAACTCTCTTCAGGCAAGGACCTCGTTACATCGGGCACGAGTTGATGGTGCCCGAGGCTGGAG ATTATTTCGCGCTGCCATCCGAAAAGGAAGGCCGCGTGCTGGTGCGCAACCAGGAATCCCGCGTCGAGTTGCTTTCCAAT GTCTGCCGTCACCGGCAGGCGATCATGCTGAACGGCCGCGGCCATGCGAGCAACATCGTGTGTCCGCTGCACCGCTGGAC CTACGATCTCGACGGCCGCTTGCTCGGGGCGCCGCACTTCCCCGACAAACCCTGCCTGAACCTGAACCGCACCCCGCTGC AGAATTGGCAGGGGCTGTTGTTCGAGGCGGAAGGCCGCGACGTTGCCAAGGATCTCGCGAACCTCGGCCCGCGCCATCAC TTCAACTTCTCGGACTACCTGTTCGATCATGTCGAAGTGCATGAGTGCAACTACAACTGGAAGACGTTCATCGAGGTCTA CCTCGAGGATTACCACGTCGTCCCGTTCCACCCGGGCCTCGGCAGCTTCGTGTCCTGCGACGACCTCAAATGGGAGTTCG GCGACTGGTACAGCGTGCAGACGGTCGGCGTGCATAACGCGCTCGCCAAGCCGGGCAGCCCGACGTATCAGAAGTGGCAC GAGCAGGTGCTGCGCTTTCGGGACGGCGTGCCGCCCGAGTTCGGCGCGATCTGGATGGTCTATTACCCGGGCCTGATGAT CGAGTGGTATCCGCACGTGCTCGTGGTGTCGTGGCTGATTCCGCGCGGCCCGCAGCAGACGACCAACATCGTCGAGTTCT ACTACCCCGAGGAAATCGCGCTGTTCGAACGCGAATTCGTCGAGGCCGAGCGGGCGGCCTATATGGAAACCGCGGTCGAG GACGACGAGATCGCGATGCGCATGGACGCCGGCCGCCGTGCGCTGATGGAGCGCGGCGAATCGCAAGTCGGGCCGTATCA AAGTCCGATGGAAGACGGCATGCAGCACTTCCACGAGTTCCTGCGCCGCAAGCTGGGCACGATCTGA
Upstream 100 bases:
>100_bases ACCCGCTCGATGCACTTCCGAGTATAATCATCGGTTCCCCTAAATCGATTCTTCGATGGTTGGGTTGTTCACTGCTTTCA CGCTTTCACCGGGAGTGGGA
Downstream 100 bases:
>100_bases CGCGGCCGGCATCGCGGCGGCACAATCCGCAAAAGACAGGCTTCGGCCTGTCTTTTTTTGTTTAGACTTGTTGGTTCCGG CCCGTTTCCCCGCAGGAGCT
Product: Iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSNLSDALQLKSASSQLPVTAYFDEALLAREVETLFRQGPRYIGHELMVPEAGDYFALPSEKEGRVLVRNQESRVELLSN VCRHRQAIMLNGRGHASNIVCPLHRWTYDLDGRLLGAPHFPDKPCLNLNRTPLQNWQGLLFEAEGRDVAKDLANLGPRHH FNFSDYLFDHVEVHECNYNWKTFIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWYSVQTVGVHNALAKPGSPTYQKWH EQVLRFRDGVPPEFGAIWMVYYPGLMIEWYPHVLVVSWLIPRGPQQTTNIVEFYYPEEIALFEREFVEAERAAYMETAVE DDEIAMRMDAGRRALMERGESQVGPYQSPMEDGMQHFHEFLRRKLGTI
Sequences:
>Translated_368_residues MSNLSDALQLKSASSQLPVTAYFDEALLAREVETLFRQGPRYIGHELMVPEAGDYFALPSEKEGRVLVRNQESRVELLSN VCRHRQAIMLNGRGHASNIVCPLHRWTYDLDGRLLGAPHFPDKPCLNLNRTPLQNWQGLLFEAEGRDVAKDLANLGPRHH FNFSDYLFDHVEVHECNYNWKTFIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWYSVQTVGVHNALAKPGSPTYQKWH EQVLRFRDGVPPEFGAIWMVYYPGLMIEWYPHVLVVSWLIPRGPQQTTNIVEFYYPEEIALFEREFVEAERAAYMETAVE DDEIAMRMDAGRRALMERGESQVGPYQSPMEDGMQHFHEFLRRKLGTI >Mature_367_residues SNLSDALQLKSASSQLPVTAYFDEALLAREVETLFRQGPRYIGHELMVPEAGDYFALPSEKEGRVLVRNQESRVELLSNV CRHRQAIMLNGRGHASNIVCPLHRWTYDLDGRLLGAPHFPDKPCLNLNRTPLQNWQGLLFEAEGRDVAKDLANLGPRHHF NFSDYLFDHVEVHECNYNWKTFIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWYSVQTVGVHNALAKPGSPTYQKWHE QVLRFRDGVPPEFGAIWMVYYPGLMIEWYPHVLVVSWLIPRGPQQTTNIVEFYYPEEIALFEREFVEAERAAYMETAVED DEIAMRMDAGRRALMERGESQVGPYQSPMEDGMQHFHEFLRRKLGTI
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Escherichia coli, GI1788103, Length=395, Percent_Identity=25.8227848101266, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1788888, Length=194, Percent_Identity=27.319587628866, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 - InterPro: IPR001663 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 42609; Mature: 42478
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLSDALQLKSASSQLPVTAYFDEALLAREVETLFRQGPRYIGHELMVPEAGDYFALPS CCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCEEECCC EKEGRVLVRNQESRVELLSNVCRHRQAIMLNGRGHASNIVCPLHRWTYDLDGRLLGAPHF CCCCEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEHHHCEEECCCEEECCCCC PDKPCLNLNRTPLQNWQGLLFEAEGRDVAKDLANLGPRHHFNFSDYLFDHVEVHECNYNW CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCH KTFIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWYSVQTVGVHNALAKPGSPTYQKWH HHHHHHHHHCEEEEECCCCCCCCEECCCCCCCCCCEEEEEEECHHHHHCCCCCCHHHHHH EQVLRFRDGVPPEFGAIWMVYYPGLMIEWYPHVLVVSWLIPRGPQQTTNIVEFYYPEEIA HHHHHHHCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH LFEREFVEAERAAYMETAVEDDEIAMRMDAGRRALMERGESQVGPYQSPMEDGMQHFHEF HHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH LRRKLGTI HHHHHCCC >Mature Secondary Structure SNLSDALQLKSASSQLPVTAYFDEALLAREVETLFRQGPRYIGHELMVPEAGDYFALPS CCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCEEECCC EKEGRVLVRNQESRVELLSNVCRHRQAIMLNGRGHASNIVCPLHRWTYDLDGRLLGAPHF CCCCEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEHHHCEEECCCEEECCCCC PDKPCLNLNRTPLQNWQGLLFEAEGRDVAKDLANLGPRHHFNFSDYLFDHVEVHECNYNW CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCH KTFIEVYLEDYHVVPFHPGLGSFVSCDDLKWEFGDWYSVQTVGVHNALAKPGSPTYQKWH HHHHHHHHHCEEEEECCCCCCCCEECCCCCCCCCCEEEEEEECHHHHHCCCCCCHHHHHH EQVLRFRDGVPPEFGAIWMVYYPGLMIEWYPHVLVVSWLIPRGPQQTTNIVEFYYPEEIA HHHHHHHCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH LFEREFVEAERAAYMETAVEDDEIAMRMDAGRRALMERGESQVGPYQSPMEDGMQHFHEF HHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH LRRKLGTI HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]