| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is treY [H]
Identifier: 238024916
GI number: 238024916
Start: 1982464
End: 1985265
Strand: Direct
Name: treY [H]
Synonym: bglu_2g15610
Alternate gene names: 238024916
Gene position: 1982464-1985265 (Clockwise)
Preceding gene: 238024915
Following gene: 238024918
Centisome position: 70.12
GC content: 75.45
Gene sequence:
>2802_bases ATGAGCGCGCCGCGCGCCACGCTGCGGCTGCAGCTGCACGCCGGCTTCACGTTCGACGACGCGGCGGCCCAGGTCGATCT GTACGCGCAGCTCGGCATCAGCCACCTCTATCTGTCGCCGATCACGCAGGCCGAACCGGGCTCGATGCACGGCTACGACA CCGTCGATTACGGCCGCGTGAGCGAGGCGCTCGGCGGCGAGCATGGCCTGGTGCGGCTGGTCGGCGCGCTGCGCCGGCAC GGCATCGGCACGCTCGTCGATTTCGTGCCGAACCACATGGGGGTGGCCGGCTCGTCGAACGGCTGGTGGAACGACGTGCT CGAATGGGGACCGCGCAGCCGCTATGCGCGCCACTTCGACATCGACTGGCGCCCCGCCGATCCGCTGCTGCACGGCCGCG TGCTGCTGCCCTGCCTGGGCCGCCCGTACGGCGAGGCGCTCGCCGCGGGCGAGATGGTGCTCGGCTGCGACGCGGCCACC GGCCGCTTCACGATCGCCTGCTCGGGACGCACGCTGCCCGTCGCGCTCGCCGCCTATCCCGAGATCCTGCGCGCCGCGCA GCAGCCCGGGCTCGACGCGCTGGCGGCGCGCCTCGCGCCGCTGGCCGACGCGCCGCCCGGCACGCCGCAGGCCAGCCTTG CGGGCGCGGCCCTGCGCGAACACCTGGCCGCCCACGGCGCGGCCGCGCTCGACGGCGCGCTGCGCCACTACGCGAGCGAC AGCGAGGCCGGCCGCGCGCGGCTGCACGCGCTGCTGGAGCGGCAGGCCTACCGGCTCGCCTGGTGGCGCACCGCGCCCGA CGAGATCAACTGGCGCCGCTTCTTCGACATCGACACGCTGGCCGGCGTCCGCGTGGAGGACAACGCGGTGTTCGACGACG TCCACGCGCTGCTGTTCCGGCTCGTCGACGCGGGGCTGGTGGACGGCGTGCGGATCGATCACGTCGACGGCCTGGCCGAC CCGCGCGGCTACTGCCGCAAGCTGCGCGCGCGGCTCGCCGAGCTGCGCGACCCGGCGCCGTACCTGGTGGTGGAGAAAAT CCTCGCGCCGGGCGAGGCGCTGCCCGCCGACTGGCTCACCGACGGCACCACCGGCTACGATTTCATGAACGACGTGGGCG CGCTGCTGCACGATCCGGCCGGCGCCGAGCCGCTCGCGCAGCACTGGGCCGAGCTGTCGGGCAGCAGCGCGACGTTCGCC GACGAGGCGCTGACGGGCAAGCGCGAGGCGGCCTCGCGGCAGCTCGCGGTGGAGATCGAGCGCGTGACCGACGCGCTGCA CGCGATCGCGCGCGCCGATGCTCGCACGCGCGATTTCGCGCGCAACCCGCTGCGCCGCGTGGTGGCCGAGCTGGCCGCGC AGTTGCCCGTCTACCGGCTCTATCCGCTCGACGGCGAGCGCGCCGCCGAGCGCCCGTTCATCGAGGCCGCCAGCCGCGCC GCGCGTCGCGCGCTGCCGCGCACCGATCACGAGGCGCTCGAGCGCGTGCTCGGCTGGCTCGGCTGGCCCGAGATCGCGCG GGGCGACGCGCGGACGGACGCGGAAACGGCAATCGAGGCGGACGCCGGGCCGGACCCGGCGCTGGCGCGCCGGGCGCGCA TCGCGTTCGCACGCCTCAGCTCGCCGCTCGCGGCAAAGGGCGTGGAGGATACCGCCTGCTATCGCTACGGGCGCCTGCTG TCGCGCAACGAAGTCGGCGCCGACGCCGGCCAGCTCGCGCTCTCGCCCGACGCGTTCCACCTGCGCAATCTCGAGCGCGC GGCGCGCACGCCCCACACGCTGCTCGCCACGGCCACGCACGACCACAAGCGCGGCGAGGACGTGCGCGCGCGGCTCGCGG TGCTAAGCGAGGTGCCGGTGCCGTGGCGCGCCGCCGTCGACGCCTGGATCGCACGCAACGACGCGCTTTGCCGGGTGCCG GCCGAGGGCGCGCCGCCGGCGCCGGGACGCGCGGCGCAGGCGATGCTGTACCAGACGCTGGTGGGCTGCTGGCCGCCCGC GCTCGCGCCCGACGACGCCGAGGGCCTCGCCGCGCTGGCCGAGCGCGTCGTGCAATGGCAGACCAAGGCACTGCGCGAGG CCAAGCGCGAAACCAGCTGGCTCGCGCCCGATGCGGCCTACGAAGCGGCCTGCGAGGCATTCGTGCGCGAACTGCTCAGG CCGCGCGGCCAGGACGACTTCGTCCATGCGCTGCACGCGTTCGTCGCGCAGATCGCACCGGCCGGCGTGCTCAATTCGCT GCTGCAGACGGTGCTGCGCATCGCCTCGCCCGGCGTGCCTGATCTTTACCAGGGCACCGACCTGTGGGACTTCAGCCTCG TCGATCCCGACAACCGGCGCGAGGTGGACTTCGCCGAGCGGCGCGCCACGCCGGTGGACGGGCCGCTGGCCGACTATCTG CGCGCCTGGCCCGACGGCCGCATCAAGCGCGCGCTCGTCACGCGCATGCTGGCGCTGCGCGCCGACCACGCGGCCACCTT CTCCCACGGCGCCTACCTGCCGCTCACGCTGGAAGGCCCGGCGCGCGAGCACGCGATCGCGCTGCTGCGGCGCGACACGC GCAGCGCCGTGCTGGTGGTCGGCAGCCGGCTCGCGCACGGCAGGCTGGCCACCGACGGCGGCGGGCCGCGCATCGACGCG CGCTACTGGGGCGACACCGCGCTCGTGCTGCCCGACGACGCGCCCGCCCAATGGCTCGAACGGCTCGGCGCGGAGCGCCG CGTGGCGGCGGCGAACGGGCGGCTGCGGGTGGCCGAGTTGCTCGCCGGCTTGCCGGTGGCGGCGCTGGTCGGCACGCCCT GA
Upstream 100 bases:
>100_bases GCCGCCGCATGCCGCGCGAGACGGCGGGCCTGCTCGACGACGCCGCCGGCGCGACGCTGGCCGCCATCGCGCTGGCGCGG CGCACCGGCCCGGAGGCGTC
Downstream 100 bases:
>100_bases AGCGGGGACCCGCCGGCGCGGCGCGCAGGCGCCTCGCCGGCGCGGCGGGCGGCCCGTACCCGAGCCCAGCGACGATCGGC GCGGGTGAGGCCCGCGGCAC
Product: Malto-oligosyltrehalose synthase
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 933; Mature: 932
Protein sequence:
>933_residues MSAPRATLRLQLHAGFTFDDAAAQVDLYAQLGISHLYLSPITQAEPGSMHGYDTVDYGRVSEALGGEHGLVRLVGALRRH GIGTLVDFVPNHMGVAGSSNGWWNDVLEWGPRSRYARHFDIDWRPADPLLHGRVLLPCLGRPYGEALAAGEMVLGCDAAT GRFTIACSGRTLPVALAAYPEILRAAQQPGLDALAARLAPLADAPPGTPQASLAGAALREHLAAHGAAALDGALRHYASD SEAGRARLHALLERQAYRLAWWRTAPDEINWRRFFDIDTLAGVRVEDNAVFDDVHALLFRLVDAGLVDGVRIDHVDGLAD PRGYCRKLRARLAELRDPAPYLVVEKILAPGEALPADWLTDGTTGYDFMNDVGALLHDPAGAEPLAQHWAELSGSSATFA DEALTGKREAASRQLAVEIERVTDALHAIARADARTRDFARNPLRRVVAELAAQLPVYRLYPLDGERAAERPFIEAASRA ARRALPRTDHEALERVLGWLGWPEIARGDARTDAETAIEADAGPDPALARRARIAFARLSSPLAAKGVEDTACYRYGRLL SRNEVGADAGQLALSPDAFHLRNLERAARTPHTLLATATHDHKRGEDVRARLAVLSEVPVPWRAAVDAWIARNDALCRVP AEGAPPAPGRAAQAMLYQTLVGCWPPALAPDDAEGLAALAERVVQWQTKALREAKRETSWLAPDAAYEAACEAFVRELLR PRGQDDFVHALHAFVAQIAPAGVLNSLLQTVLRIASPGVPDLYQGTDLWDFSLVDPDNRREVDFAERRATPVDGPLADYL RAWPDGRIKRALVTRMLALRADHAATFSHGAYLPLTLEGPAREHAIALLRRDTRSAVLVVGSRLAHGRLATDGGGPRIDA RYWGDTALVLPDDAPAQWLERLGAERRVAAANGRLRVAELLAGLPVAALVGTP
Sequences:
>Translated_933_residues MSAPRATLRLQLHAGFTFDDAAAQVDLYAQLGISHLYLSPITQAEPGSMHGYDTVDYGRVSEALGGEHGLVRLVGALRRH GIGTLVDFVPNHMGVAGSSNGWWNDVLEWGPRSRYARHFDIDWRPADPLLHGRVLLPCLGRPYGEALAAGEMVLGCDAAT GRFTIACSGRTLPVALAAYPEILRAAQQPGLDALAARLAPLADAPPGTPQASLAGAALREHLAAHGAAALDGALRHYASD SEAGRARLHALLERQAYRLAWWRTAPDEINWRRFFDIDTLAGVRVEDNAVFDDVHALLFRLVDAGLVDGVRIDHVDGLAD PRGYCRKLRARLAELRDPAPYLVVEKILAPGEALPADWLTDGTTGYDFMNDVGALLHDPAGAEPLAQHWAELSGSSATFA DEALTGKREAASRQLAVEIERVTDALHAIARADARTRDFARNPLRRVVAELAAQLPVYRLYPLDGERAAERPFIEAASRA ARRALPRTDHEALERVLGWLGWPEIARGDARTDAETAIEADAGPDPALARRARIAFARLSSPLAAKGVEDTACYRYGRLL SRNEVGADAGQLALSPDAFHLRNLERAARTPHTLLATATHDHKRGEDVRARLAVLSEVPVPWRAAVDAWIARNDALCRVP AEGAPPAPGRAAQAMLYQTLVGCWPPALAPDDAEGLAALAERVVQWQTKALREAKRETSWLAPDAAYEAACEAFVRELLR PRGQDDFVHALHAFVAQIAPAGVLNSLLQTVLRIASPGVPDLYQGTDLWDFSLVDPDNRREVDFAERRATPVDGPLADYL RAWPDGRIKRALVTRMLALRADHAATFSHGAYLPLTLEGPAREHAIALLRRDTRSAVLVVGSRLAHGRLATDGGGPRIDA RYWGDTALVLPDDAPAQWLERLGAERRVAAANGRLRVAELLAGLPVAALVGTP >Mature_932_residues SAPRATLRLQLHAGFTFDDAAAQVDLYAQLGISHLYLSPITQAEPGSMHGYDTVDYGRVSEALGGEHGLVRLVGALRRHG IGTLVDFVPNHMGVAGSSNGWWNDVLEWGPRSRYARHFDIDWRPADPLLHGRVLLPCLGRPYGEALAAGEMVLGCDAATG RFTIACSGRTLPVALAAYPEILRAAQQPGLDALAARLAPLADAPPGTPQASLAGAALREHLAAHGAAALDGALRHYASDS EAGRARLHALLERQAYRLAWWRTAPDEINWRRFFDIDTLAGVRVEDNAVFDDVHALLFRLVDAGLVDGVRIDHVDGLADP RGYCRKLRARLAELRDPAPYLVVEKILAPGEALPADWLTDGTTGYDFMNDVGALLHDPAGAEPLAQHWAELSGSSATFAD EALTGKREAASRQLAVEIERVTDALHAIARADARTRDFARNPLRRVVAELAAQLPVYRLYPLDGERAAERPFIEAASRAA RRALPRTDHEALERVLGWLGWPEIARGDARTDAETAIEADAGPDPALARRARIAFARLSSPLAAKGVEDTACYRYGRLLS RNEVGADAGQLALSPDAFHLRNLERAARTPHTLLATATHDHKRGEDVRARLAVLSEVPVPWRAAVDAWIARNDALCRVPA EGAPPAPGRAAQAMLYQTLVGCWPPALAPDDAEGLAALAERVVQWQTKALREAKRETSWLAPDAAYEAACEAFVRELLRP RGQDDFVHALHAFVAQIAPAGVLNSLLQTVLRIASPGVPDLYQGTDLWDFSLVDPDNRREVDFAERRATPVDGPLADYLR AWPDGRIKRALVTRMLALRADHAATFSHGAYLPLTLEGPAREHAIALLRRDTRSAVLVVGSRLAHGRLATDGGGPRIDAR YWGDTALVLPDDAPAQWLERLGAERRVAAANGRLRVAELLAGLPVAALVGTP
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 101032; Mature: 100901
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPRATLRLQLHAGFTFDDAAAQVDLYAQLGISHLYLSPITQAEPGSMHGYDTVDYGRV CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCHHHH SEALGGEHGLVRLVGALRRHGIGTLVDFVPNHMGVAGSSNGWWNDVLEWGPRSRYARHFD HHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCEECC IDWRPADPLLHGRVLLPCLGRPYGEALAAGEMVLGCDAATGRFTIACSGRTLPVALAAYP CCCCCCCCHHCCCCHHHHCCCCHHHHHHHCCEEEECCCCCCCEEEEECCCCCCHHHHHHH EILRAAQQPGLDALAARLAPLADAPPGTPQASLAGAALREHLAAHGAAALDGALRHYASD HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC SEAGRARLHALLERQAYRLAWWRTAPDEINWRRFFDIDTLAGVRVEDNAVFDDVHALLFR CHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCHHHCCCEECCCHHHHHHHHHHHH LVDAGLVDGVRIDHVDGLADPRGYCRKLRARLAELRDPAPYLVVEKILAPGEALPADWLT HHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHCC DGTTGYDFMNDVGALLHDPAGAEPLAQHWAELSGSSATFADEALTGKREAASRQLAVEIE CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHH RVTDALHAIARADARTRDFARNPLRRVVAELAAQLPVYRLYPLDGERAAERPFIEAASRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCHHHHHHHHH ARRALPRTDHEALERVLGWLGWPEIARGDARTDAETAIEADAGPDPALARRARIAFARLS HHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHC SPLAAKGVEDTACYRYGRLLSRNEVGADAGQLALSPDAFHLRNLERAARTPHTLLATATH CCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEEEECCC DHKRGEDVRARLAVLSEVPVPWRAAVDAWIARNDALCRVPAEGAPPAPGRAAQAMLYQTL CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHH VGCWPPALAPDDAEGLAALAERVVQWQTKALREAKRETSWLAPDAAYEAACEAFVRELLR HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC PRGQDDFVHALHAFVAQIAPAGVLNSLLQTVLRIASPGVPDLYQGTDLWDFSLVDPDNRR CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC EVDFAERRATPVDGPLADYLRAWPDGRIKRALVTRMLALRADHAATFSHGAYLPLTLEGP CCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCC AREHAIALLRRDTRSAVLVVGSRLAHGRLATDGGGPRIDARYWGDTALVLPDDAPAQWLE CHHHHHHHHHHCCCCEEEEECCHHCCCEEECCCCCCEECEEEECCEEEEECCCCHHHHHH RLGAERRVAAANGRLRVAELLAGLPVAALVGTP HHCCCCEEECCCCCCHHHHHHCCCCHHHHCCCC >Mature Secondary Structure SAPRATLRLQLHAGFTFDDAAAQVDLYAQLGISHLYLSPITQAEPGSMHGYDTVDYGRV CCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCHHHH SEALGGEHGLVRLVGALRRHGIGTLVDFVPNHMGVAGSSNGWWNDVLEWGPRSRYARHFD HHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCEECC IDWRPADPLLHGRVLLPCLGRPYGEALAAGEMVLGCDAATGRFTIACSGRTLPVALAAYP CCCCCCCCHHCCCCHHHHCCCCHHHHHHHCCEEEECCCCCCCEEEEECCCCCCHHHHHHH EILRAAQQPGLDALAARLAPLADAPPGTPQASLAGAALREHLAAHGAAALDGALRHYASD HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC SEAGRARLHALLERQAYRLAWWRTAPDEINWRRFFDIDTLAGVRVEDNAVFDDVHALLFR CHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCHHHCCCEECCCHHHHHHHHHHHH LVDAGLVDGVRIDHVDGLADPRGYCRKLRARLAELRDPAPYLVVEKILAPGEALPADWLT HHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHCC DGTTGYDFMNDVGALLHDPAGAEPLAQHWAELSGSSATFADEALTGKREAASRQLAVEIE CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHH RVTDALHAIARADARTRDFARNPLRRVVAELAAQLPVYRLYPLDGERAAERPFIEAASRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCHHHHHHHHH ARRALPRTDHEALERVLGWLGWPEIARGDARTDAETAIEADAGPDPALARRARIAFARLS HHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHC SPLAAKGVEDTACYRYGRLLSRNEVGADAGQLALSPDAFHLRNLERAARTPHTLLATATH CCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEEEECCC DHKRGEDVRARLAVLSEVPVPWRAAVDAWIARNDALCRVPAEGAPPAPGRAAQAMLYQTL CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHH VGCWPPALAPDDAEGLAALAERVVQWQTKALREAKRETSWLAPDAAYEAACEAFVRELLR HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC PRGQDDFVHALHAFVAQIAPAGVLNSLLQTVLRIASPGVPDLYQGTDLWDFSLVDPDNRR CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC EVDFAERRATPVDGPLADYLRAWPDGRIKRALVTRMLALRADHAATFSHGAYLPLTLEGP CCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCC AREHAIALLRRDTRSAVLVVGSRLAHGRLATDGGGPRIDARYWGDTALVLPDDAPAQWLE CHHHHHHHHHHCCCCEEEEECCHHCCCEEECCCCCCEECEEEECCEEEEECCCCHHHHHH RLGAERRVAAANGRLRVAELLAGLPVAALVGTP HHCCCCEEECCCCCCHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]