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The map label for this gene is ytfH [C]

Identifier: 238024918

GI number: 238024918

Start: 1986422

End: 1986859

Strand: Direct

Name: ytfH [C]

Synonym: bglu_2g15630

Alternate gene names: 238024918

Gene position: 1986422-1986859 (Clockwise)

Preceding gene: 238024916

Following gene: 238024919

Centisome position: 70.26

GC content: 65.07

Gene sequence:

>438_bases
ATGGACAAGGAAATTCCCTGTGCCGAGCCCTGCCCGATCGCGCGCAGCCTGGCGGTGTTCGGCGACGCCTGGAGTCTGTT
GATCCTGCGGGACGCCCATGCCGGGCTGACCCGCTTCGACCAGTTCCGCAAAAGCCTCGGCATTGCTCCGACGATTCTTT
CCCGCCGGCTGGCGAAGCTGACGGAGGAAGACATGCTGGAGAAGCGGCTCTACTCCGAGAACCCGCCGCGAGAGGAATAT
GTTCTGACCGCGGGTGGACGTGACGTCTTGCCGGTGCTGTTCATGATTGGCGCGTGGGGACGCCAGCACCGCGGCGGCGG
TGACCTGGTACGCTTCCTCGATGCCGAGGCCGGGACGGAAATCAAGCCGGTGGCCATTGATGAGAATACGGGCGCCCGGA
TAGGATCGCGCCCAATCCGAGTCGTCCCCCCGGGGTGA

Upstream 100 bases:

>100_bases
TGCTCATCATCCATTCTCCAGATCGTGGGGAGGCCATGTGTCGAAGGTGTTACTATCGAATCGATATCGACCATCCTAAC
ACAGTAACTATCGAAACAGT

Downstream 100 bases:

>100_bases
TCGCCCTGAAGGGGCGCGATAGCAGGCGGTGGCAATCTCTCGGCCGTGACCAGGCAAACATCGTCTTCAACGGCCTGCCA
ACCTGGATTGAACGATAGCG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDKEIPCAEPCPIARSLAVFGDAWSLLILRDAHAGLTRFDQFRKSLGIAPTILSRRLAKLTEEDMLEKRLYSENPPREEY
VLTAGGRDVLPVLFMIGAWGRQHRGGGDLVRFLDAEAGTEIKPVAIDENTGARIGSRPIRVVPPG

Sequences:

>Translated_145_residues
MDKEIPCAEPCPIARSLAVFGDAWSLLILRDAHAGLTRFDQFRKSLGIAPTILSRRLAKLTEEDMLEKRLYSENPPREEY
VLTAGGRDVLPVLFMIGAWGRQHRGGGDLVRFLDAEAGTEIKPVAIDENTGARIGSRPIRVVPPG
>Mature_145_residues
MDKEIPCAEPCPIARSLAVFGDAWSLLILRDAHAGLTRFDQFRKSLGIAPTILSRRLAKLTEEDMLEKRLYSENPPREEY
VLTAGGRDVLPVLFMIGAWGRQHRGGGDLVRFLDAEAGTEIKPVAIDENTGARIGSRPIRVVPPG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15978; Mature: 15978

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKEIPCAEPCPIARSLAVFGDAWSLLILRDAHAGLTRFDQFRKSLGIAPTILSRRLAKL
CCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
TEEDMLEKRLYSENPPREEYVLTAGGRDVLPVLFMIGAWGRQHRGGGDLVRFLDAEAGTE
HHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC
IKPVAIDENTGARIGSRPIRVVPPG
CCEEEEECCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MDKEIPCAEPCPIARSLAVFGDAWSLLILRDAHAGLTRFDQFRKSLGIAPTILSRRLAKL
CCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
TEEDMLEKRLYSENPPREEYVLTAGGRDVLPVLFMIGAWGRQHRGGGDLVRFLDAEAGTE
HHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC
IKPVAIDENTGARIGSRPIRVVPPG
CCEEEEECCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]