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The map label for this gene is ytxE [H]

Identifier: 238024905

GI number: 238024905

Start: 1959889

End: 1960566

Strand: Reverse

Name: ytxE [H]

Synonym: bglu_2g15500

Alternate gene names: 238024905

Gene position: 1960566-1959889 (Counterclockwise)

Preceding gene: 238024906

Following gene: 238024904

Centisome position: 69.34

GC content: 65.93

Gene sequence:

>678_bases
ATGAGCGCTCCTTCCGACAACCAGCAGGCCACCGCCGGCAAGGCCGCATACGGCGACGAGACGGACGAGCAGTCCGGGCG
TTGGCTCATTTCGTATGCCGACCTGATTACCACGCTGATGGTGCTGTTCCTCGCGCTGTACGTGCTGCAACTGGCGAGAT
CCCGTGAGCTCGAGCTCCGGTCGGTCGAGAAGCAGGCGGCGAGCCAGACGACGCAGGGCACCCGCGCGGGTGCCGAGAGC
ACGGCTGCGCGGCAACGCATGCTCGCCTTGCTGGAGCCCTTGCGCGCGAAGCACGAGATTTCGATTGCCAGCCTGCCCCA
AGGCGTCGAGGTCACCATCAACGCGAAAATCCTGTTCAACTCGGGAGAGGCCCATCTGTTGCCCGAGTCGATGGACGTGC
TGGACCAGGTTGCCGCGGTCCTGCGCGATCCGTTGACCGCCAACATTATCGTGGAGGGGCATACCGACAGCGTGCCGATT
TCGACCTCGAAGTACGAGTCGAACTGGGAGCTTTCCTCGGCACGCGCCGGCGCGGTGGTGCGGTTCTTGATGGACAAGGG
GGTGGGCGCGCACCGGATGGCGGCAGTGGGCCGGGCCGACAACGTCCCGCTGGTGCTCGGCGAGCAGGCCGCCGCGAGGG
CAGCCAATCGGCGCGTCACGATTCTTGTCGAGCCATGA

Upstream 100 bases:

>100_bases
CGCGATATCGCGCAAGGAGTCGCCGCACACCATCGCGACCCGCCTGGCCGGCGACGTGCGGGAACGCGCCGCCGAGTCGC
TCGGATAGTGCGCCCTCCTC

Downstream 100 bases:

>100_bases
CGCGCGCCGGACCGATGCGCCCGCGTCGAGGCCCGTGCTTGCGCAATTGCCTGGCGCCAACGCGCCGCAAGCCGCTCTGA
TCCGGGCCGAGGCCGCACAT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSAPSDNQQATAGKAAYGDETDEQSGRWLISYADLITTLMVLFLALYVLQLARSRELELRSVEKQAASQTTQGTRAGAES
TAARQRMLALLEPLRAKHEISIASLPQGVEVTINAKILFNSGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDSVPI
STSKYESNWELSSARAGAVVRFLMDKGVGAHRMAAVGRADNVPLVLGEQAAARAANRRVTILVEP

Sequences:

>Translated_225_residues
MSAPSDNQQATAGKAAYGDETDEQSGRWLISYADLITTLMVLFLALYVLQLARSRELELRSVEKQAASQTTQGTRAGAES
TAARQRMLALLEPLRAKHEISIASLPQGVEVTINAKILFNSGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDSVPI
STSKYESNWELSSARAGAVVRFLMDKGVGAHRMAAVGRADNVPLVLGEQAAARAANRRVTILVEP
>Mature_224_residues
SAPSDNQQATAGKAAYGDETDEQSGRWLISYADLITTLMVLFLALYVLQLARSRELELRSVEKQAASQTTQGTRAGAEST
AARQRMLALLEPLRAKHEISIASLPQGVEVTINAKILFNSGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDSVPIS
TSKYESNWELSSARAGAVVRFLMDKGVGAHRMAAVGRADNVPLVLGEQAAARAANRRVTILVEP

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 24189; Mature: 24058

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPSDNQQATAGKAAYGDETDEQSGRWLISYADLITTLMVLFLALYVLQLARSRELELR
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SVEKQAASQTTQGTRAGAESTAARQRMLALLEPLRAKHEISIASLPQGVEVTINAKILFN
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEHHCCCCCEEEEEEEEEEEE
SGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDSVPISTSKYESNWELSSARAGAVV
CCCCEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
RFLMDKGVGAHRMAAVGRADNVPLVLGEQAAARAANRRVTILVEP
HHHHHCCCCHHHHHHHCCCCCCCEEECCHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
SAPSDNQQATAGKAAYGDETDEQSGRWLISYADLITTLMVLFLALYVLQLARSRELELR
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SVEKQAASQTTQGTRAGAESTAARQRMLALLEPLRAKHEISIASLPQGVEVTINAKILFN
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEHHCCCCCEEEEEEEEEEEE
SGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDSVPISTSKYESNWELSSARAGAVV
CCCCEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
RFLMDKGVGAHRMAAVGRADNVPLVLGEQAAARAANRRVTILVEP
HHHHHCCCCHHHHHHHCCCCCCCEEECCHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]