| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024857
Identifier: 238024857
GI number: 238024857
Start: 1899224
End: 1900702
Strand: Reverse
Name: 238024857
Synonym: bglu_2g14970
Alternate gene names: NA
Gene position: 1900702-1899224 (Counterclockwise)
Preceding gene: 238024858
Following gene: 238024856
Centisome position: 67.23
GC content: 73.09
Gene sequence:
>1479_bases ATGTCCACCACCCTCGAGCGCGCGAGCGCGGCCGTGCGTTCCCCGCAGGCCGGCTATCGCACGCTATGGCGCTGGCATTT CTATGCCGGCCTGTTCGTGATGCCGTTCCTGATCGTGCTCGCGATCACCGGCACGCTCTATTGTTTCCAGCCGCAGATCG AGCCGCTGCTCTATGCACACCGCCTGGTCGTGACGCCGCGCGCCACGCCCGCGCTCGATGCCGATACGCTGCTGGCGCGT GCGCGCGCCTCGCTGCCGGACGGCGCGCAGCCGGTGTCGGCCGAAATCCGCCGCGCGCCCGAGCGCAGCGCCGAGTTCGT GTTCCGCCTGCCCGGCGGGCGGCGCGAGAGCGTCTATGTCGATCCCTACGACGGCGCCGTGCTCGGCACGCTCGGCGTGG ACGATCGCTTCATGCAGATCGTCCGGATGGTGCATCGCAAGCTGCTGCTCGGCAAGCCGGGCGAGCTGCTGATGGAACTG GTGGCGTGCTGGACGCTGGTGATGATCGGCACCGGCGTGGCGCTCTGGTGGCCGCGCGAGCCGGATCGCGCGCGGCGCCG CTGGTGGCCCGACCCGCGGCTGCGCGGCCGGGCGCTCTGGAAGAGCGTGCATGCCTGGCTCGGCATCTGGCTCGCGGCCG GCGCGCTCGGGTTCGTGCTGAGCGGGCTGCCGTGGACGGGCTCGTGGGGCCAGGGCTTCAAGGCGGTCGCCGCGCGTGTG AAGCTCGGCTCGCCGCCCGGCGCATGGGGGGCTGGGTCGCTGCGCTCGGCACGTCCCGGCGCGGCCAGCGCGGCATCGGA CGCGCCCACAACGGACGCACCGCCGGGCGCGAGGCATCACTCCGCCGGCGCCGCCGCCGCGATGCTGGGCATGGTGATGG ACGACCTGCCGGTGCGGCTCGCGCCCTGGGCGGTCGGCCAGGTGCCGGTGCCCGAATCGGCTGCGGCGGCGCCGGGCGCG CGGCCGCTCACGCTCGACCAGGCGATTGCCGCGATGGCCGCCCACGGCTTGACGAGCGGCTACACGCTGGTGCTGCCCGC GAATCCGGACGGCGTGTATACGGCCTCGTACTTTCCCGCCGATCCGAAGGCGGAGCGCACGCTGTCGCTCGACCAGTACA GCGGCGCGGTGCTGCGCGACATCCGCTATGCCGATTACGGCGCGATCGCGCAGGGTGTCTCGTATGGCACGTCGCTGCAC ATGGGCCGCTATTTCGGGCTCGCCAACCAGTTGATTTGCGCGGCGCTGTCGCTCGGCCTCGCGGCGATGGCGGTGAGCGG TTTCGTGATGTGGTGGAAGCGGCGCCCGGCGCTCAAGCTCGGCGCGCCGCCGCGCGAACGCCGGCCGCCGCCGATGCGTG CCTGGATCGCCGGGCTCGTGCTGCTCGGCAGCGTGTTTCCGCTGATGGGCGCGAGCCTCGTCGCCGTCTGGCTTGCCGAC CGGCTGCTGTTCGGCCGGGCCACGCGCGCGCTGGCCTGA
Upstream 100 bases:
>100_bases TCGACCGCTCGCGTGCCGCGAGCGCCGCCGTCGCGCGCGCTGCCCGCGCATGCCGGCCGCGTGCCGCCGCGCGTCGCCGC CGATTGCAAGGAGCTGAGCC
Downstream 100 bases:
>100_bases TGCAAGCCCCGCCGGCGCCGTTCGATCGGCGCGCCGGCGGCAGCGCGGGGCGCCCGGGTGGCGCGCCGCCGCCGATCGAT CTCCCCGCGCCGGCGCGGCA
Product: peptidase
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; Sulfite Reductase; Peptidase; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix; PepSY-Associated TM Helix Containing Protein; PepSY-Associated TM Helix Family Protein; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; PepSY Amd Peptidase M4 Protein; M4 Family Peptidase; Sulfite Reductase Flavoprotein Subunit Alpha; Transmembrane Transporter
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MSTTLERASAAVRSPQAGYRTLWRWHFYAGLFVMPFLIVLAITGTLYCFQPQIEPLLYAHRLVVTPRATPALDADTLLAR ARASLPDGAQPVSAEIRRAPERSAEFVFRLPGGRRESVYVDPYDGAVLGTLGVDDRFMQIVRMVHRKLLLGKPGELLMEL VACWTLVMIGTGVALWWPREPDRARRRWWPDPRLRGRALWKSVHAWLGIWLAAGALGFVLSGLPWTGSWGQGFKAVAARV KLGSPPGAWGAGSLRSARPGAASAASDAPTTDAPPGARHHSAGAAAAMLGMVMDDLPVRLAPWAVGQVPVPESAAAAPGA RPLTLDQAIAAMAAHGLTSGYTLVLPANPDGVYTASYFPADPKAERTLSLDQYSGAVLRDIRYADYGAIAQGVSYGTSLH MGRYFGLANQLICAALSLGLAAMAVSGFVMWWKRRPALKLGAPPRERRPPPMRAWIAGLVLLGSVFPLMGASLVAVWLAD RLLFGRATRALA
Sequences:
>Translated_492_residues MSTTLERASAAVRSPQAGYRTLWRWHFYAGLFVMPFLIVLAITGTLYCFQPQIEPLLYAHRLVVTPRATPALDADTLLAR ARASLPDGAQPVSAEIRRAPERSAEFVFRLPGGRRESVYVDPYDGAVLGTLGVDDRFMQIVRMVHRKLLLGKPGELLMEL VACWTLVMIGTGVALWWPREPDRARRRWWPDPRLRGRALWKSVHAWLGIWLAAGALGFVLSGLPWTGSWGQGFKAVAARV KLGSPPGAWGAGSLRSARPGAASAASDAPTTDAPPGARHHSAGAAAAMLGMVMDDLPVRLAPWAVGQVPVPESAAAAPGA RPLTLDQAIAAMAAHGLTSGYTLVLPANPDGVYTASYFPADPKAERTLSLDQYSGAVLRDIRYADYGAIAQGVSYGTSLH MGRYFGLANQLICAALSLGLAAMAVSGFVMWWKRRPALKLGAPPRERRPPPMRAWIAGLVLLGSVFPLMGASLVAVWLAD RLLFGRATRALA >Mature_491_residues STTLERASAAVRSPQAGYRTLWRWHFYAGLFVMPFLIVLAITGTLYCFQPQIEPLLYAHRLVVTPRATPALDADTLLARA RASLPDGAQPVSAEIRRAPERSAEFVFRLPGGRRESVYVDPYDGAVLGTLGVDDRFMQIVRMVHRKLLLGKPGELLMELV ACWTLVMIGTGVALWWPREPDRARRRWWPDPRLRGRALWKSVHAWLGIWLAAGALGFVLSGLPWTGSWGQGFKAVAARVK LGSPPGAWGAGSLRSARPGAASAASDAPTTDAPPGARHHSAGAAAAMLGMVMDDLPVRLAPWAVGQVPVPESAAAAPGAR PLTLDQAIAAMAAHGLTSGYTLVLPANPDGVYTASYFPADPKAERTLSLDQYSGAVLRDIRYADYGAIAQGVSYGTSLHM GRYFGLANQLICAALSLGLAAMAVSGFVMWWKRRPALKLGAPPRERRPPPMRAWIAGLVLLGSVFPLMGASLVAVWLADR LLFGRATRALA
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52933; Mature: 52802
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLERASAAVRSPQAGYRTLWRWHFYAGLFVMPFLIVLAITGTLYCFQPQIEPLLYAH CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHH RLVVTPRATPALDADTLLARARASLPDGAQPVSAEIRRAPERSAEFVFRLPGGRRESVYV HEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCEEE DPYDGAVLGTLGVDDRFMQIVRMVHRKLLLGKPGELLMELVACWTLVMIGTGVALWWPRE CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCC PDRARRRWWPDPRLRGRALWKSVHAWLGIWLAAGALGFVLSGLPWTGSWGQGFKAVAARV CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH KLGSPPGAWGAGSLRSARPGAASAASDAPTTDAPPGARHHSAGAAAAMLGMVMDDLPVRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE APWAVGQVPVPESAAAAPGARPLTLDQAIAAMAAHGLTSGYTLVLPANPDGVYTASYFPA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCC DPKAERTLSLDQYSGAVLRDIRYADYGAIAQGVSYGTSLHMGRYFGLANQLICAALSLGL CCCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AAMAVSGFVMWWKRRPALKLGAPPRERRPPPMRAWIAGLVLLGSVFPLMGASLVAVWLAD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLFGRATRALA HHHHHHHHHHCC >Mature Secondary Structure STTLERASAAVRSPQAGYRTLWRWHFYAGLFVMPFLIVLAITGTLYCFQPQIEPLLYAH CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHH RLVVTPRATPALDADTLLARARASLPDGAQPVSAEIRRAPERSAEFVFRLPGGRRESVYV HEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCEEE DPYDGAVLGTLGVDDRFMQIVRMVHRKLLLGKPGELLMELVACWTLVMIGTGVALWWPRE CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCC PDRARRRWWPDPRLRGRALWKSVHAWLGIWLAAGALGFVLSGLPWTGSWGQGFKAVAARV CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH KLGSPPGAWGAGSLRSARPGAASAASDAPTTDAPPGARHHSAGAAAAMLGMVMDDLPVRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE APWAVGQVPVPESAAAAPGARPLTLDQAIAAMAAHGLTSGYTLVLPANPDGVYTASYFPA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCC DPKAERTLSLDQYSGAVLRDIRYADYGAIAQGVSYGTSLHMGRYFGLANQLICAALSLGL CCCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AAMAVSGFVMWWKRRPALKLGAPPRERRPPPMRAWIAGLVLLGSVFPLMGASLVAVWLAD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLFGRATRALA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA