| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024769
Identifier: 238024769
GI number: 238024769
Start: 1798300
End: 1799406
Strand: Direct
Name: 238024769
Synonym: bglu_2g14070
Alternate gene names: NA
Gene position: 1798300-1799406 (Clockwise)
Preceding gene: 238024766
Following gene: 238024770
Centisome position: 63.6
GC content: 70.1
Gene sequence:
>1107_bases ATGAGCCCGCCGCCGGCCAGCCGGTCCGGCCGGTTCGCCGAGCTCGACTTCTTTCGCGGGCTGGTGCTGCTCGTGATCGT GGTCGACCATATCGGCGGCAGCGTGCTGTCGCGCGTGACGCTGCACGCCTACGCGCTCTGCGACGCGGCCGAGGTGTTCG TCTTCCTCGGCGGCTTCGCCACCGCGATCGCCTACAACTCGCTGGCCGAACGGCAGACCGAGGCGGTCGCGCGGCAGCGC TTCATCCGCCGCGCGTTCGAAATCTACCGGGCGTTCCTGATCACGGCCGGACTGATGCTGCTGATCACGGCGGTGCTCGG CGCGCTCGCGATCGACGGCCCGAACATGCCGACCAACGATCTCGACGGGCTCATGCACCGCCCGTTCGCGGCGCTGCGCG ACATCCTGCTGTTGCGACGCCAGCCCTATCTGGCCTCGGTGCTGCCGATGTACGCGTTCTTCGCGGCGCTGGTGCCGCTG GCCCTGCCGCTCGCTCGCGACAAGCCCTGGCTGCTGCTCGCCGTCAGCCTGCTGATCTGGCTGTCGGCGCGGCGCATCGC CGGCTACCTGCCGACGGCGGACGGCGTGCCATGGGATTTCAATCCGTTCGCCTGGCAGTTCCTGTTCGTGCTCGGCGCGC TGTCGCGCTGCCAGCCGGTCTATGCGTCGCTGTCGCGGCAGCCGCGCGGGGTGGCGGTGACGGCGCTGGCGGTGGCCGTG GTGGCGGCGGGCGCCTATTACCGGCTGCGCATCGAGCCGTTCCCGACCGATCCGGCGATCAAGCAGAACCTCGGCCCGCT GCGGCTCGCCAATTTTCTCGCGATCGCCTGGCTCGCAGCCAAGCTGGTCCACCTCGGCTGGATGCACAAGGTGGCGCGCA TGCTGCCGTGGATCGGCACGATCGGCCGCCAGGGGCTGCTCTGCTTCGTGGCAGGCACGGCGATCTCGCTGTCGGTGGAC TCGGTGCTCTACTGGGAAACCGACGGCTATCTCGACGTGCCGCTCGGCCTGAGCGCCGATGCCGTCGCGATCGGCCTGCT CTATCTGGTCGCGAAGCTGTATGGTCCGCTCGCCGCGCGGCTGCCGTTGCGCCGCTCGCGGCGCTGA
Upstream 100 bases:
>100_bases CGCTCCCCGCCGCCCGCTTCATGTCGATTCTTTCGCCGCGCCGCGCCGCCGCTGCGCTTCGCTTCGCTCGTCCATCGCGC GCCGCCCGGCGCCGCCTCGC
Downstream 100 bases:
>100_bases GCGGGGCGGCGGCGATGGCCATCGTGCGCATGCCCGCGCCCCGTCACGGCACGGCACCCCGCCCGCCCGAGCCCGCGCGT GCGCCGCAGGCACTGCCCGC
Product: putative OpgC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSPPPASRSGRFAELDFFRGLVLLVIVVDHIGGSVLSRVTLHAYALCDAAEVFVFLGGFATAIAYNSLAERQTEAVARQR FIRRAFEIYRAFLITAGLMLLITAVLGALAIDGPNMPTNDLDGLMHRPFAALRDILLLRRQPYLASVLPMYAFFAALVPL ALPLARDKPWLLLAVSLLIWLSARRIAGYLPTADGVPWDFNPFAWQFLFVLGALSRCQPVYASLSRQPRGVAVTALAVAV VAAGAYYRLRIEPFPTDPAIKQNLGPLRLANFLAIAWLAAKLVHLGWMHKVARMLPWIGTIGRQGLLCFVAGTAISLSVD SVLYWETDGYLDVPLGLSADAVAIGLLYLVAKLYGPLAARLPLRRSRR
Sequences:
>Translated_368_residues MSPPPASRSGRFAELDFFRGLVLLVIVVDHIGGSVLSRVTLHAYALCDAAEVFVFLGGFATAIAYNSLAERQTEAVARQR FIRRAFEIYRAFLITAGLMLLITAVLGALAIDGPNMPTNDLDGLMHRPFAALRDILLLRRQPYLASVLPMYAFFAALVPL ALPLARDKPWLLLAVSLLIWLSARRIAGYLPTADGVPWDFNPFAWQFLFVLGALSRCQPVYASLSRQPRGVAVTALAVAV VAAGAYYRLRIEPFPTDPAIKQNLGPLRLANFLAIAWLAAKLVHLGWMHKVARMLPWIGTIGRQGLLCFVAGTAISLSVD SVLYWETDGYLDVPLGLSADAVAIGLLYLVAKLYGPLAARLPLRRSRR >Mature_367_residues SPPPASRSGRFAELDFFRGLVLLVIVVDHIGGSVLSRVTLHAYALCDAAEVFVFLGGFATAIAYNSLAERQTEAVARQRF IRRAFEIYRAFLITAGLMLLITAVLGALAIDGPNMPTNDLDGLMHRPFAALRDILLLRRQPYLASVLPMYAFFAALVPLA LPLARDKPWLLLAVSLLIWLSARRIAGYLPTADGVPWDFNPFAWQFLFVLGALSRCQPVYASLSRQPRGVAVTALAVAVV AAGAYYRLRIEPFPTDPAIKQNLGPLRLANFLAIAWLAAKLVHLGWMHKVARMLPWIGTIGRQGLLCFVAGTAISLSVDS VLYWETDGYLDVPLGLSADAVAIGLLYLVAKLYGPLAARLPLRRSRR
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40293; Mature: 40162
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPPASRSGRFAELDFFRGLVLLVIVVDHIGGSVLSRVTLHAYALCDAAEVFVFLGGFA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAIAYNSLAERQTEAVARQRFIRRAFEIYRAFLITAGLMLLITAVLGALAIDGPNMPTND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LDGLMHRPFAALRDILLLRRQPYLASVLPMYAFFAALVPLALPLARDKPWLLLAVSLLIW HHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LSARRIAGYLPTADGVPWDFNPFAWQFLFVLGALSRCQPVYASLSRQPRGVAVTALAVAV HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VAAGAYYRLRIEPFPTDPAIKQNLGPLRLANFLAIAWLAAKLVHLGWMHKVARMLPWIGT HHCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGRQGLLCFVAGTAISLSVDSVLYWETDGYLDVPLGLSADAVAIGLLYLVAKLYGPLAAR HCCCCEEEEEECCEEEEEECEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH LPLRRSRR CCCCCCCC >Mature Secondary Structure SPPPASRSGRFAELDFFRGLVLLVIVVDHIGGSVLSRVTLHAYALCDAAEVFVFLGGFA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAIAYNSLAERQTEAVARQRFIRRAFEIYRAFLITAGLMLLITAVLGALAIDGPNMPTND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LDGLMHRPFAALRDILLLRRQPYLASVLPMYAFFAALVPLALPLARDKPWLLLAVSLLIW HHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LSARRIAGYLPTADGVPWDFNPFAWQFLFVLGALSRCQPVYASLSRQPRGVAVTALAVAV HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VAAGAYYRLRIEPFPTDPAIKQNLGPLRLANFLAIAWLAAKLVHLGWMHKVARMLPWIGT HHCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGRQGLLCFVAGTAISLSVDSVLYWETDGYLDVPLGLSADAVAIGLLYLVAKLYGPLAAR HCCCCEEEEEECCEEEEEECEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH LPLRRSRR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA