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The map label for this gene is dppB [H]

Identifier: 238024756

GI number: 238024756

Start: 1786754

End: 1787866

Strand: Direct

Name: dppB [H]

Synonym: bglu_2g13940

Alternate gene names: 238024756

Gene position: 1786754-1787866 (Clockwise)

Preceding gene: 238024755

Following gene: 238024757

Centisome position: 63.2

GC content: 71.7

Gene sequence:

>1113_bases
ATGCCGTCCCCCGCTTCATCGCCCGACGCACGGCCAGATTCCCGGCCCGCGCCCGTTTCGAGGCTCGCGGCGCTGCGCAC
GCTGCCGGCGCGCCGGCCGCTCGTGCGCCGGCTGCTGCGCCTCGCGCGCTGGCTGCTGACGCTCGCCGTCACGTTCGCCG
GGCTGCTCGCGCTGACCTTCGTGATCGGCCGCAAGGTGCCGATCGACCCGGTGCTGGCGGTGCTCGGCGACCGCGCCTCG
GCCGCCGCCTACGCAGCCGAACGCACGGCGCTGGGCCTCGACCGGCCGCTCGCCGAGCAATTCCTGATCTACCTGCGCGC
CGTGCTGCACGGCGACCTCGGCATCTCGCTGCTGACCGCCAATCCGGTGCGCGACGACATCCTGCGCGTGTTCCCCGCCA
CGCTCGAGCTGGCCACGCTCGCCACCCTGATCGGCATCGGCGTGGGCGTGCCGCTCGGCGTGGCCGCCGCGGTGCGCCAC
AACCGGCCGGTCGACCACCTCGCCCGCTTCGTCGGCCTGATCGGCAGCTCGGTGCCGGTATTCTGGCTCGGCCTGATGGG
GCTGCTGCTGTTCTACGCGAAGCTGCACTGGGTGGGCGGCCCGGGCCGCATCGACGCGGCCTACGACGGCATGGTGGAGG
CGCGCACCGGCAGCCTGCTGATCGACGCGGCGCTGGCGGGCGAATGGGAGGTGTTCCGCAACGCGCTCTCGCACATCGCG
CTGCCGGCCGCGATCCTCGGCTACTACTCGGTGGCCTACCTGAGCCGCATGACGCGCTCGTTCATGCTCGACCAGCTGAG
CCAGGAATACATCGTGACCGCGCGCGCCAAGGGCGTGCCGGAGCGCCGCGTGATCTGGCGCCACGCGTTCGGCAACATCG
CCGTGCCGCTCTCGACGGTGATCGCGCTCACCTACAGCAACCTGCTCGAGGGCTCGGTGCTGACCGAGATCGTGTTCGCG
TGGCCCGGCATCGGCTCGTACCTGACGGGCGGGCTGCTCAACGCCGACATGAACGCGGTGCTCGGCGCCACGCTGGTGAT
CGGCGCGATGTTCATCACGCTCAACCTGCTGACCGACGCGCTCTATCGCGTGTTCGATCCGCGCGCGCGATGA

Upstream 100 bases:

>100_bases
CCGCAAGCTGCTGAAGTGAGCCTGCGGCGAGCCGGCCGCCACCGGCCCGAGCGCCGCCGCGCCCGTTCGACCCCGTCCCG
ACCAGGAGACCGACGCCCCG

Downstream 100 bases:

>100_bases
ACGGCCCGCGCGCCGTACCGCCGCTCATGCCGCTCATGCCGCCCATGCCCTGCCCGAACCGCCGATGACCCAGCCTCCCG
CTTCCCCCGGCGCCACCACG

Product: dipeptide/oligopeptide/nickel family ABC transporter inner membrane subunit

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MPSPASSPDARPDSRPAPVSRLAALRTLPARRPLVRRLLRLARWLLTLAVTFAGLLALTFVIGRKVPIDPVLAVLGDRAS
AAAYAAERTALGLDRPLAEQFLIYLRAVLHGDLGISLLTANPVRDDILRVFPATLELATLATLIGIGVGVPLGVAAAVRH
NRPVDHLARFVGLIGSSVPVFWLGLMGLLLFYAKLHWVGGPGRIDAAYDGMVEARTGSLLIDAALAGEWEVFRNALSHIA
LPAAILGYYSVAYLSRMTRSFMLDQLSQEYIVTARAKGVPERRVIWRHAFGNIAVPLSTVIALTYSNLLEGSVLTEIVFA
WPGIGSYLTGGLLNADMNAVLGATLVIGAMFITLNLLTDALYRVFDPRAR

Sequences:

>Translated_370_residues
MPSPASSPDARPDSRPAPVSRLAALRTLPARRPLVRRLLRLARWLLTLAVTFAGLLALTFVIGRKVPIDPVLAVLGDRAS
AAAYAAERTALGLDRPLAEQFLIYLRAVLHGDLGISLLTANPVRDDILRVFPATLELATLATLIGIGVGVPLGVAAAVRH
NRPVDHLARFVGLIGSSVPVFWLGLMGLLLFYAKLHWVGGPGRIDAAYDGMVEARTGSLLIDAALAGEWEVFRNALSHIA
LPAAILGYYSVAYLSRMTRSFMLDQLSQEYIVTARAKGVPERRVIWRHAFGNIAVPLSTVIALTYSNLLEGSVLTEIVFA
WPGIGSYLTGGLLNADMNAVLGATLVIGAMFITLNLLTDALYRVFDPRAR
>Mature_369_residues
PSPASSPDARPDSRPAPVSRLAALRTLPARRPLVRRLLRLARWLLTLAVTFAGLLALTFVIGRKVPIDPVLAVLGDRASA
AAYAAERTALGLDRPLAEQFLIYLRAVLHGDLGISLLTANPVRDDILRVFPATLELATLATLIGIGVGVPLGVAAAVRHN
RPVDHLARFVGLIGSSVPVFWLGLMGLLLFYAKLHWVGGPGRIDAAYDGMVEARTGSLLIDAALAGEWEVFRNALSHIAL
PAAILGYYSVAYLSRMTRSFMLDQLSQEYIVTARAKGVPERRVIWRHAFGNIAVPLSTVIALTYSNLLEGSVLTEIVFAW
PGIGSYLTGGLLNADMNAVLGATLVIGAMFITLNLLTDALYRVFDPRAR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=324, Percent_Identity=42.5925925925926, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI1787761, Length=310, Percent_Identity=44.1935483870968, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1789888, Length=286, Percent_Identity=33.5664335664336, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1787053, Length=337, Percent_Identity=31.7507418397626, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787550, Length=274, Percent_Identity=30.6569343065693, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1787497, Length=318, Percent_Identity=29.559748427673, Blast_Score=138, Evalue=7e-34,
Organism=Escherichia coli, GI1788504, Length=280, Percent_Identity=28.2142857142857, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39855; Mature: 39724

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS00024 HEMOPEXIN ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPASSPDARPDSRPAPVSRLAALRTLPARRPLVRRLLRLARWLLTLAVTFAGLLALTF
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIGRKVPIDPVLAVLGDRASAAAYAAERTALGLDRPLAEQFLIYLRAVLHGDLGISLLTA
HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
NPVRDDILRVFPATLELATLATLIGIGVGVPLGVAAAVRHNRPVDHLARFVGLIGSSVPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
FWLGLMGLLLFYAKLHWVGGPGRIDAAYDGMVEARTGSLLIDAALAGEWEVFRNALSHIA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEECCCCEEEEHHHCCCHHHHHHHHHHHH
LPAAILGYYSVAYLSRMTRSFMLDQLSQEYIVTARAKGVPERRVIWRHAFGNIAVPLSTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
IALTYSNLLEGSVLTEIVFAWPGIGSYLTGGLLNADMNAVLGATLVIGAMFITLNLLTDA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LYRVFDPRAR
HHHHHCCCCC
>Mature Secondary Structure 
PSPASSPDARPDSRPAPVSRLAALRTLPARRPLVRRLLRLARWLLTLAVTFAGLLALTF
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIGRKVPIDPVLAVLGDRASAAAYAAERTALGLDRPLAEQFLIYLRAVLHGDLGISLLTA
HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
NPVRDDILRVFPATLELATLATLIGIGVGVPLGVAAAVRHNRPVDHLARFVGLIGSSVPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
FWLGLMGLLLFYAKLHWVGGPGRIDAAYDGMVEARTGSLLIDAALAGEWEVFRNALSHIA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEECCCCEEEEHHHCCCHHHHHHHHHHHH
LPAAILGYYSVAYLSRMTRSFMLDQLSQEYIVTARAKGVPERRVIWRHAFGNIAVPLSTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
IALTYSNLLEGSVLTEIVFAWPGIGSYLTGGLLNADMNAVLGATLVIGAMFITLNLLTDA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LYRVFDPRAR
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]