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The map label for this gene is yqfA [C]

Identifier: 238024715

GI number: 238024715

Start: 1734371

End: 1734991

Strand: Direct

Name: yqfA [C]

Synonym: bglu_2g13520

Alternate gene names: 238024715

Gene position: 1734371-1734991 (Clockwise)

Preceding gene: 238024714

Following gene: 238024717

Centisome position: 61.34

GC content: 67.47

Gene sequence:

>621_bases
GTGGTGGTCGGTGAACGTTTCAATAGCATCACGCATCTGGTCGGCGCGCTGATGTCGGTGGCGGGGCTCGCAACGCTCGT
CACGCTGGGCGCGCTCGCGGGCGATGCCTACAAGGTGGTCAGCGCCGCCATCTACGGCGCCGCGCTGCTGGTGCTCTACG
CGGTCTCCACGCTCTATCACAGCGTGCATCGGCCGCGCCTGAAGGCGATCCTGCAGAAGTGCGATCATTCGGCGATCTAC
CTGCTGATCGCCGGCAGCTACACGCCGTTTACGCTGATCACGCTGCGCGGCCCGTGGGGCTGGTCGCTGTTCGGCGTGAT
CTGGGGGCTGGCGGTGTTCGGCATCGTTCAGGAGCTCACGCTCGGGCGCCGCACGCGGACCGTCTCGATGGTGCTGTACG
TGCTGATGGGCTGGCTCGCCCTCGTCGCGGCCCGGCCGCTGCTGGCGGCGCTGCCGCTCGGCGGCACGGCATGGGTCGTG
GCGGGCGGCATCATCTACAGCGCCGGCATCTACTTCTTCGTCAACGACGAACGGATCCGCCACGGGCACGGCATCTGGCA
TCTGTTCGTGCTCGGCGGCAGCCTGTGCCAGTTCGTCGGCATCGCCTGCTACGTCATCTGA

Upstream 100 bases:

>100_bases
GCGCGCCCGCCAAGCGCCGCGGCAGCTGCGCCGGCCCCGGCCTGGCGCCGGGCCGCCGGCGATTTTTCAACAACTGTCAG
GCAACAAAGAGGTTCGAGTC

Downstream 100 bases:

>100_bases
ATCACGGCAGGATGCGCCGCCAGGGCAGCGGCGGCGCATCCGTGGTGAGGGCGGCGCCCGGCCCCGGCCGCCGCGCCGGC
CGATACGCGACGGCGCCGGC

Product: hemolysin III family channel protein

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MVVGERFNSITHLVGALMSVAGLATLVTLGALAGDAYKVVSAAIYGAALLVLYAVSTLYHSVHRPRLKAILQKCDHSAIY
LLIAGSYTPFTLITLRGPWGWSLFGVIWGLAVFGIVQELTLGRRTRTVSMVLYVLMGWLALVAARPLLAALPLGGTAWVV
AGGIIYSAGIYFFVNDERIRHGHGIWHLFVLGGSLCQFVGIACYVI

Sequences:

>Translated_206_residues
MVVGERFNSITHLVGALMSVAGLATLVTLGALAGDAYKVVSAAIYGAALLVLYAVSTLYHSVHRPRLKAILQKCDHSAIY
LLIAGSYTPFTLITLRGPWGWSLFGVIWGLAVFGIVQELTLGRRTRTVSMVLYVLMGWLALVAARPLLAALPLGGTAWVV
AGGIIYSAGIYFFVNDERIRHGHGIWHLFVLGGSLCQFVGIACYVI
>Mature_206_residues
MVVGERFNSITHLVGALMSVAGLATLVTLGALAGDAYKVVSAAIYGAALLVLYAVSTLYHSVHRPRLKAILQKCDHSAIY
LLIAGSYTPFTLITLRGPWGWSLFGVIWGLAVFGIVQELTLGRRTRTVSMVLYVLMGWLALVAARPLLAALPLGGTAWVV
AGGIIYSAGIYFFVNDERIRHGHGIWHLFVLGGSLCQFVGIACYVI

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=206, Percent_Identity=32.0388349514563, Blast_Score=94, Evalue=7e-20,
Organism=Homo sapiens, GI154759277, Length=230, Percent_Identity=29.1304347826087, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI52630445, Length=206, Percent_Identity=29.126213592233, Blast_Score=82, Evalue=5e-16,
Organism=Escherichia coli, GI1789266, Length=202, Percent_Identity=42.0792079207921, Blast_Score=155, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71996356, Length=177, Percent_Identity=35.5932203389831, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24640324, Length=218, Percent_Identity=30.2752293577982, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 22147; Mature: 22147

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGERFNSITHLVGALMSVAGLATLVTLGALAGDAYKVVSAAIYGAALLVLYAVSTLYH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVHRPRLKAILQKCDHSAIYLLIAGSYTPFTLITLRGPWGWSLFGVIWGLAVFGIVQELT
HHCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LGRRTRTVSMVLYVLMGWLALVAARPLLAALPLGGTAWVVAGGIIYSAGIYFFVNDERIR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCHHH
HGHGIWHLFVLGGSLCQFVGIACYVI
HCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVVGERFNSITHLVGALMSVAGLATLVTLGALAGDAYKVVSAAIYGAALLVLYAVSTLYH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVHRPRLKAILQKCDHSAIYLLIAGSYTPFTLITLRGPWGWSLFGVIWGLAVFGIVQELT
HHCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LGRRTRTVSMVLYVLMGWLALVAARPLLAALPLGGTAWVVAGGIIYSAGIYFFVNDERIR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCHHH
HGHGIWHLFVLGGSLCQFVGIACYVI
HCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]